Mock Version: 4.1 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/gromacs.spec'], chrootPath='/var/lib/mock/fedora-rawhide-aarch64-1691493763.976836/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.k5g3re5p:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.k5g3re5p:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', 'bccc29c677b840aa9ff915594f96fc61', '-D', '/var/lib/mock/fedora-rawhide-aarch64-1691493763.976836/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.k5g3re5p:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target aarch64 --nodeps /builddir/build/SPECS/gromacs.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689811200 Wrote: /builddir/build/SRPMS/gromacs-2022.3-4.fc39.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/gromacs.spec'], chrootPath='/var/lib/mock/fedora-rawhide-aarch64-1691493763.976836/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.k5g3re5p:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.k5g3re5p:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '1a41999456ee424db40b58ba85889ddb', '-D', '/var/lib/mock/fedora-rawhide-aarch64-1691493763.976836/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.k5g3re5p:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target aarch64 --nodeps /builddir/build/SPECS/gromacs.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689811200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ndhF9t + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf gromacs-2022.3 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/gromacs-2022.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd gromacs-2022.3 + rm -rf /builddir/build/BUILD/gromacs-2022.3-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/gromacs-2022.3-SPECPARTS + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/regressiontests-2022.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + install -Dpm644 /builddir/build/SOURCES/manual-2022.3.pdf ./serial/docs/manual/gromacs.pdf + rm -r src/external/fftpack src/external/tng_io src/external/lmfit src/external/muparser + sed -i 's/set(_timeout [0-9]*)/set(_timeout 9000)/' src/testutils/TestMacros.cmake + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.po8wiR + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd gromacs-2022.3 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec READLINK_CMD /usr/bin/readlink readlink ++ Nm=READLINK_CMD ++ confPath=/usr/bin/readlink ++ execNm=readlink ++ eval READLINK_CMD=/usr/bin/readlink +++ READLINK_CMD=/usr/bin/readlink ++ '[' '!' -x /usr/bin/readlink ']' ++ unset Nm confPath execNm ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec ++ '[' -f /proc/62/exe ']' +++ /usr/bin/readlink /proc/62/exe ++ my_shell=/usr/bin/bash +++ /usr/bin/expr /usr/bin/bash : '-*\(.*\)' ++ my_shell=/usr/bin/bash +++ /usr/bin/basename /usr/bin/bash ++ my_shell=bash ++ case ${my_shell} in ++ '[' -f /usr/share/lmod/lmod/init/bash ']' ++ . /usr/share/lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/share/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE READLINK_CMD + for p in '' _d + for mpi in '' mpich openmpi + test -n '' + mkdir -p serial + pushd serial ~/build/BUILD/gromacs-2022.3/serial ~/build/BUILD/gromacs-2022.3 + test -z '' + cp -al ../regressiontests-2022.3 tests/ + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ test -n '' ++ echo -DGMX_X11=ON ++ test -z '' ++ echo -DREGRESSIONTEST_PATH=/builddir/build/BUILD/gromacs-2022.3/serial/tests ++ test -n '' ++ echo -DGMX_GPU=OpenCL + /usr/bin/cmake -S .. -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DCMAKE_SKIP_INSTALL_RPATH=ON -DGMX_BLAS_USER=flexiblas -DGMX_BUILD_UNITTESTS:BOOL=ON -DGMX_USE_LMFIT=EXTERNAL -DGMX_EXTERNAL_TNG:BOOL=ON -DGMX_EXTERNAL_TINYXML2:BOOL=OFF -DGMX_USE_MUPARSER=EXTERNAL -DGMX_LAPACK_USER=flexiblas -DGMX_USE_RDTSCP=OFF -DGMX_INSTALL_LEGACY_API=ON -DGMX_DSSP_PROGRAM_PATH=/usr/bin/dssp -DGMX_VERSION_STRING_OF_FORK=Fedora39 -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_X11=ON -DREGRESSIONTEST_PATH=/builddir/build/BUILD/gromacs-2022.3/serial/tests -DGMX_GPU=OpenCL -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Python3_LIBRARIES Development Development.Module Development.Embed) (found suitable version "3.12.0", minimum required is "3.7") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Looking for fedisableexcept in m -- Looking for fedisableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Checking for module 'mpi-c' -- Package 'mpi-c', required by 'virtual:world', not found -- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) -- Checking for module 'mpi-cxx' -- Package 'mpi-cxx', required by 'virtual:world', not found -- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) -- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND) -- Using default binary suffix: "" -- Using default library suffix: "" -- Found X11: /usr/include -- Looking for XOpenDisplay in /usr/lib64/libX11.so -- Looking for XOpenDisplay in /usr/lib64/libX11.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Performing Test TEST_ATOMICS -- Performing Test TEST_ATOMICS - Success -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- GPU support with OpenCL is deprecated. It is still fully supported (and recommended for AMD and Intel GPUs). It may be replaced by different approaches in future releases of GROMACS. -- Looking for CL_VERSION_3_0 -- Looking for CL_VERSION_3_0 - found -- Found OpenCL: /usr/lib64/libOpenCL.so (found version "3.0") -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 1 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd sve -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Checking for system XDR support -- Checking for system XDR support - not present -- Checking for module 'fftw3f' -- Found fftw3f, version 3.3.10 -- Looking for fftwf_plan_many_dft in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_plan_many_dft_r2c in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft_r2c in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_plan_many_dft_c2r in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft_c2r in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_have_simd_sse in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_sse in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_sse in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_sse in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_sse2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_sse2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2_128 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx2_128 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx512 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx512 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_512 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx_512 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_kcvi in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_kcvi in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_altivec in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_altivec in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_neon in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_neon in /usr/lib64/libfftw3f.so - found -- Using external FFT library - FFTW3 -- Checking that user BLAS library flexiblas works -- Looking for dgemm_ -- Looking for dgemm_ - found -- Checking that user LAPACK library flexiblas works -- Looking for cheev_ -- Looking for cheev_ - found -- Could not convert sample image, ImageMagick convert can not be used. A possible way to fix it can be found here: https://alexvanderbist.com/2018/fixing-imagick-error-unauthorized -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE pygments) (Required is at least version "1.6.1") -- Performing Test HAS_WARNING_EVERYTHING -- Performing Test HAS_WARNING_EVERYTHING - Failed CMake Deprecation Warning at src/external/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Performing Test HAVE_NO_DEPRECATED_COPY -- Performing Test HAVE_NO_DEPRECATED_COPY - Success -- Performing Test HAS_NO_STRINGOP_TRUNCATION -- Performing Test HAS_NO_STRINGOP_TRUNCATION - Success -- Performing Test HAS_NO_REDUNDANT_MOVE -- Performing Test HAS_NO_REDUNDANT_MOVE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Performing Test HAS_NO_UNUSED_PARAMETER -- Performing Test HAS_NO_UNUSED_PARAMETER - Success -- Performing Test HAS_NO_MISSING_DECLARATIONS -- Performing Test HAS_NO_MISSING_DECLARATIONS - Success -- Performing Test HAS_NO_NULL_CONVERSIONS -- Performing Test HAS_NO_NULL_CONVERSIONS - Success -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Could NOT find clFFT (missing: clFFT_INCLUDE_DIR clFFT_LIBRARY) -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- Performing Test LMFIT_LINKS_OK -- Performing Test LMFIT_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (lmfit) does not match the name of the calling package (Lmfit). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindLmfit.cmake:83 (find_package_handle_standard_args) cmake/gmxManageLmfit.cmake:76 (find_package) src/gromacs/CMakeLists.txt:394 (gmx_manage_lmfit) This warning is for project developers. Use -Wno-dev to suppress it. -- Found lmfit: /usr/include (found version "8.2.2") -- Performing Test MUPARSER_LINKS_OK -- Performing Test MUPARSER_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (muparser) does not match the name of the calling package (Muparser). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindMuparser.cmake:79 (find_package_handle_standard_args) cmake/gmxManageMuparser.cmake:74 (find_package) src/gromacs/CMakeLists.txt:396 (gmx_manage_muparser) This warning is for project developers. Use -Wno-dev to suppress it. -- Found muparser: /usr/include (found version "2.3.4") -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Configuring done (22.7s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/build /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/accessors.cpp.o [ 1%] Generating release version information [ 1%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3 && /usr/bin/cmake -D PYTHON_EXECUTABLE=/usr/bin/python3.12 -D PROJECT_VERSION=2022.3-Fedora39 -D PROJECT_SOURCE_DIR=/builddir/build/BUILD/gromacs-2022.3 -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/errhandler.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/accessors.cpp.o -MF CMakeFiles/clFFT.dir/library/accessors.cpp.o.d -o CMakeFiles/clFFT.dir/library/accessors.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/accessors.cpp [ 1%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -MF CMakeFiles/linearalgebra.dir/eigensolver.cpp.o.d -o CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/eigensolver.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 1%] Built target release-version-info [ 1%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o -MF CMakeFiles/clFFT.dir/library/action.transpose.cpp.o.d -o CMakeFiles/clFFT.dir/library/action.transpose.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/action.transpose.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/tmpi_malloc.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/atomic.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/lock.cpp [ 3%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -MF CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o.d -o CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/gmx_arpack.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/pthreads.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/accessors.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/alltoall.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/action.transpose.cpp:26: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_protocol.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_protocol.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_protocol.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_protocol.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/p2p_protocol.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/barrier.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/barrier.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/barrier.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/barrier.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/barrier.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_send_recv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_send_recv.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_send_recv.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_send_recv.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/p2p_send_recv.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/bcast.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_wait.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_wait.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_wait.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_wait.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/p2p_wait.cpp [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o -MF CMakeFiles/clFFT.dir/library/enqueue.cpp.o.d -o CMakeFiles/clFFT.dir/library/enqueue.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/enqueue.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/collective.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/profile.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/comm.cpp [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o -MF CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o.d -o CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/enqueue.cpp:19: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.h:23, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:21: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/reduce.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/event.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/reduce_fast.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/gather.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/scatter.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/group.cpp [ 5%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o -MF CMakeFiles/linearalgebra.dir/matrix.cpp.o.d -o CMakeFiles/linearalgebra.dir/matrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/matrix.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/tmpi_init.cpp [ 5%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.copy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.copy.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.copy.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.copy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.copy.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/topology.cpp [ 5%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o -MF CMakeFiles/linearalgebra.dir/nrjac.cpp.o.d -o CMakeFiles/linearalgebra.dir/nrjac.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/nrjac.cpp [ 6%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.cpp [ 6%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/list.cpp [ 6%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/type.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.copy.cpp:21: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.cpp:20: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 6%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -MF CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o.d -o CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/sparsematrix.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Built target linearalgebra /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/andersentemperaturecoupling.cpp [ 6%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scan.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scan.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scan.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/scan.cpp [ 6%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/numa_malloc.cpp [ 6%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/once.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Built target thread_mpi /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-unused -Wno-unused-parameter -Wno-missing-declarations -Wno-null-conversion -MD -MT src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o -MF CMakeFiles/scanner.dir/parser.cpp.o.d -o CMakeFiles/scanner.dir/parser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/parser.cpp [ 6%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.cpp:24: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 6%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -MF CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/checkpointhelper.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/checkpointhelper.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 6%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -MF CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/compositesimulatorelement.cpp [ 6%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-unused -Wno-unused-parameter -Wno-missing-declarations -Wno-null-conversion -MD -MT src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o -MF CMakeFiles/scanner.dir/scanner.cpp.o.d -o CMakeFiles/scanner.dir/scanner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/scanner.cpp [ 6%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -MF CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o.d -o CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/computeglobalselement.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Built target scanner /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Building CXX object src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -MF CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o.d -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/mdrun.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/computeglobalselement.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 6%] Building CXX object src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -MF CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o.d -o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/nonbonded_bench.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Built target mdrun_objlib /usr/bin/gmake -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/view_objlib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 6%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/3dview.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include 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CMakeFiles/view_objlib.dir/view/3dview.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/3dview.cpp [ 6%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/constraintelement.cpp [ 6%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/buttons.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/dialogs.cpp.o -MF CMakeFiles/view_objlib.dir/view/dialogs.cpp.o.d -o CMakeFiles/view_objlib.dir/view/dialogs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/dialogs.cpp [ 6%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o cd 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CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp [ 6%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/fgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/fgrid.cpp.o -MF CMakeFiles/view_objlib.dir/view/fgrid.cpp.o.d -o CMakeFiles/view_objlib.dir/view/fgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/fgrid.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:28: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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CMakeFiles/view_objlib.dir/view/manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/manager.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o -MF CMakeFiles/modularsimulator.dir/energydata.cpp.o.d -o CMakeFiles/modularsimulator.dir/energydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/energydata.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/molps.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/molps.cpp.o -MF CMakeFiles/view_objlib.dir/view/molps.cpp.o.d -o CMakeFiles/view_objlib.dir/view/molps.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/molps.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/nleg.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/nleg.cpp.o -MF CMakeFiles/view_objlib.dir/view/nleg.cpp.o.d -o CMakeFiles/view_objlib.dir/view/nleg.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/nleg.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/nmol.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/nmol.cpp.o -MF CMakeFiles/view_objlib.dir/view/nmol.cpp.o.d -o CMakeFiles/view_objlib.dir/view/nmol.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/nmol.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o -MF CMakeFiles/clFFT.dir/library/lifetime.cpp.o.d -o CMakeFiles/clFFT.dir/library/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/lifetime.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o -MF CMakeFiles/clFFT.dir/library/md5sum.cpp.o.d -o CMakeFiles/clFFT.dir/library/md5sum.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/md5sum.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/plan.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/plan.cpp.o -MF CMakeFiles/clFFT.dir/library/plan.cpp.o.d -o CMakeFiles/clFFT.dir/library/plan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/plan.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/lifetime.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/popup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/popup.cpp.o -MF CMakeFiles/view_objlib.dir/view/popup.cpp.o.d -o CMakeFiles/view_objlib.dir/view/popup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/popup.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/plan.cpp:24: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/repo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/repo.cpp.o -MF CMakeFiles/clFFT.dir/library/repo.cpp.o.d -o CMakeFiles/clFFT.dir/library/repo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/pulldown.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/pulldown.cpp.o -MF CMakeFiles/view_objlib.dir/view/pulldown.cpp.o.d -o CMakeFiles/view_objlib.dir/view/pulldown.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/pulldown.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o -MF CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/expandedensembleelement.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.h:22, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/view.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/view.cpp.o -MF CMakeFiles/view_objlib.dir/view/view.cpp.o.d -o CMakeFiles/view_objlib.dir/view/view.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/view.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/x11.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/x11.cpp.o -MF CMakeFiles/view_objlib.dir/view/x11.cpp.o.d -o CMakeFiles/view_objlib.dir/view/x11.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/x11.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/xdlg.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/xdlg.cpp.o -MF CMakeFiles/view_objlib.dir/view/xdlg.cpp.o.d -o CMakeFiles/view_objlib.dir/view/xdlg.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/xdlg.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/stdafx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/stdafx.cpp.o -MF CMakeFiles/clFFT.dir/library/stdafx.cpp.o.d -o CMakeFiles/clFFT.dir/library/stdafx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/stdafx.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/transform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/transform.cpp.o -MF CMakeFiles/clFFT.dir/library/transform.cpp.o.d -o CMakeFiles/clFFT.dir/library/transform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/transform.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o -MF CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o.d -o CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/xdlghi.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/firstorderpressurecoupling.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/transform.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o -MF CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o.d -o CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/xdlgitem.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/xmb.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/xmb.cpp.o -MF CMakeFiles/view_objlib.dir/view/xmb.cpp.o.d -o CMakeFiles/view_objlib.dir/view/xmb.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/xmb.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:27, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp:30: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:26: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 8%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/xutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/xutil.cpp.o -MF CMakeFiles/view_objlib.dir/view/xutil.cpp.o.d -o CMakeFiles/view_objlib.dir/view/xutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/xutil.cpp [ 8%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 8%] Built target view_objlib /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/gmx_objlib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 8%] Building CXX object src/programs/CMakeFiles/gmx_objlib.dir/gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -MD -MT src/programs/CMakeFiles/gmx_objlib.dir/gmx.cpp.o -MF CMakeFiles/gmx_objlib.dir/gmx.cpp.o.d -o CMakeFiles/gmx_objlib.dir/gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/gmx.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -MD -MT src/programs/CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o -MF CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o.d -o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/legacymodules.cpp [ 10%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o -MF CMakeFiles/modularsimulator.dir/forceelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/forceelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/forceelement.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 10%] Built target gmx_objlib [ 10%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o -MF CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o.d -o CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/freeenergyperturbationdata.cpp [ 10%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -MF CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o.d -o CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/modularsimulator.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/modularsimulator.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 10%] Built target clFFT [ 10%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/mttk.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/mttk.cpp.o -MF CMakeFiles/modularsimulator.dir/mttk.cpp.o.d -o CMakeFiles/modularsimulator.dir/mttk.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/mttk.cpp [ 10%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o -MF CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o.d -o CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/nosehooverchains.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -MF CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o.d -o CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/parrinellorahmanbarostat.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -MF CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o -MF CMakeFiles/modularsimulator.dir/propagator.cpp.o.d -o CMakeFiles/modularsimulator.dir/propagator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/propagator.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o -MF CMakeFiles/modularsimulator.dir/pullelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/pullelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pullelement.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -MF CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o.d -o CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/referencetemperaturemanager.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o -MF CMakeFiles/modularsimulator.dir/signallers.cpp.o.d -o CMakeFiles/modularsimulator.dir/signallers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/signallers.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -MF CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o.d -o CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -MF CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o.d -o CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/statepropagatordata.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -MF CMakeFiles/modularsimulator.dir/topologyholder.cpp.o.d -o CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/topologyholder.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/statepropagatordata.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/topologyholder.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -MF CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/trajectoryelement.cpp [ 12%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/velocityscalingtemperaturecoupling.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 12%] Built target modularsimulator /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 12%] Generating baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/VersionInfo.cmake -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion-gen.cpp.cmakein -D VERSION_OUT=utility/baseversion-gen.cpp -D GMX_SOURCE_DOI= -D GMX_RELEASE_HASH= -D GMX_SOURCE_HASH= -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxConfigureVersionInfo.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/any.cpp.o [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/basenetwork.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -MF CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o -MF CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/stringutil.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/sycl_version_information.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o -MF CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/sysinfo.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/textreader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/textreader.cpp.o -MF CMakeFiles/libgromacs.dir/utility/textreader.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/textreader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/textreader.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/textwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o -MF CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/txtdump.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 18%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 34%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_system.cpp [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/freeenergydispatch.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp:61: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_system.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/freeenergydispatch.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/grid.cpp [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gridset.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/grid.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gridset.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kerneldispatch.cpp [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gpu_data_mgmt.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kerneldispatch.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.cpp:36: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref_prune.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_setup.cpp [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_setup.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist_tuning.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist_tuning.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistparams.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistparams.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistset.cpp [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.cpp [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/prunekerneldispatch.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.h:56, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/prunekerneldispatch.cpp:38: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp [ 37%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp:69: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_jit_support.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_jit_support.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/shellcompletions.cpp [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/viewit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/viewit.cpp [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/atomdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/atomdistribution.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/atomdistribution.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 39%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/box.cpp.o [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/box.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/box.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/box.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/box.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/cellsizes.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/box.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/collect.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/collect.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/collect.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/collect.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/collect.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/cellsizes.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/collect.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/computemultibodycutoffs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlbtiming.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlbtiming.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/distribute.cpp:62: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlb.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.cpp [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_constraints.cpp [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_network.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_constraints.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_network.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_setup.cpp [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_specatomcomm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_setup.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_specatomcomm.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_vsite.cpp [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/dump.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/dump.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/dump.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/dump.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dump.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_vsite.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/ga2la.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dump.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange_impl.cpp [ 41%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomset.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange_impl.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomsetdata.cpp [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetmanager.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localatomsetmanager.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localatomsetmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomsetmanager.cpp [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopology.cpp [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopologychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopologychecker.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localtopologychecker.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localtopologychecker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopologychecker.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopology.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/makebondedlinks.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopologychecker.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/makebondedlinks.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/mdsetup.cpp [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/nsgrid.cpp [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/partition.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/partition.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/partition.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/partition.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/partition.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/mdsetup.cpp:38: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/nsgrid.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/redistribute.cpp [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/reversetopology.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/partition.cpp:82: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/redistribute.cpp:60: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/reversetopology.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/utility.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/utility.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/utility.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/utility.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 43%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/math/3dtransforms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o -MF CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o.d -o CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/splineutil.cpp [ 48%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidegpuusage.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidegpuusage.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 48%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidesimulationworkload.cpp [ 48%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/findallgputasks.cpp [ 48%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/reportgpuusage.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidesimulationworkload.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/reportgpuusage.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/taskassignment.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/usergpuids.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/taskassignment.cpp:60: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o -MF CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o.d -o CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/cyclecounter.cpp [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o -MF CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o.d -o CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/wallcycle.cpp [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/timing/walltime_accounting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/editconf.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/editconf.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/editconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/editconf.cpp [ 62%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/fflibutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/fflibutil.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/fflibutil.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/fflibutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/fflibutil.cpp [ 62%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/gen_ad.cpp [ 62%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_maxwell_velocities.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/h_db.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/grompp.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 63%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/hackblock.cpp [ 63%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hizzie.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hizzie.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/hizzie.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/hizzie.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/hizzie.cpp [ 63%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/insert_molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o -MF CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/mk_angndx.cpp [ 72%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o -MF CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/pme_error.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/pme_error.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 72%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tools/report_methods.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o -MF CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tune_pme.cpp [ 72%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o -MF CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/conformation_utilities.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tune_pme.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 72%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/network.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calc_verletbuf.cpp [ 72%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calcmu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calc_verletbuf.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 72%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/mdlib/checkpointhandler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/mdlib/compute_io.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/constr.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/constr.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/constraintrange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/expanded_internal.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/expanded_internal.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/expanded_internal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/expanded_internal.cpp [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/force.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/force.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/force.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/force.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/forcerec.cpp [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/freeenergyparameters.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/forcerec.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction_impl_stubs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction_impl_stubs.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/groupcoord.cpp [ 74%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/lincs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/lincs.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/md_support.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/md_support.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdatoms.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdatoms.cpp:42: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/perf_est.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/perf_est.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/rbin.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/resethandler.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rf_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rf_util.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/rf_util.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/rf_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/rf_util.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/resethandler.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/settle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/simulationsignal.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/simulationsignal.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/simulationsignal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/simulationsignal.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/sim_util.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/splitter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/stophandler.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/stat.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu_impl_stubs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu_impl_stubs.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update_vv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/wall.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from 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CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoutputprovider.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoutputprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingoutputprovider.cpp [ 79%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingparameters.cpp [ 79%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmminputgenerator.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:46: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:229:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:226:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmmtopologypreprocessor.cpp [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmmoptions.cpp [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmm.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmforceprovider_stub.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/listed_forces.cpp.o -MF CMakeFiles/libgromacs.dir/listed_forces/listed_forces.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/listed_forces.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu.h:52, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu_impl.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/listed_internal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/orires.cpp.o -MF CMakeFiles/libgromacs.dir/listed_forces/orires.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/orires.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/orires.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu.h:52, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/manage_threading.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/position_restraints.cpp [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/restcbt.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/restcbt.cpp [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_data_mgmt.cpp [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_buffer_ops.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream.h:56, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_buffer_ops.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer.h:53, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_types.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_data_mgmt.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 81%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/calculate_spline_moduli.cpp.o [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/ewald.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gather.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gather.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gather.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gather.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gather.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.cpp:69: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_grid.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_load_balancing.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_grid.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_load_balancing.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_only.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_only.cpp:73: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_redistribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_redistribute.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_redistribute.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_redistribute.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_redistribute.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_solve.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spline_work.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spread.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spread.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_program.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_program.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu_impl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu_impl.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include 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CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu_impl.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_ocl_stubs.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_types_host.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_ocl_stubs.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_timings.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o -MF CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/calcgrid.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_timings.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -MF CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o -MF CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/fft_fftw3.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/clfftinitializer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_impl.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_manager.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/clfftinitializer.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_manager.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/hostallocator.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gpu_utils.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context_ocl.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhIn file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_ocl.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ at/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/pmalloc_ocl.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_compiler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_compiler.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/ocl_compiler.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/ocl_compiler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/cpuinfo.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/detecthardware.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/detecthardware.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/detecthardware.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/detecthardware.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/detecthardware.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_common.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/hardwaretopology.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/detecthardware.cpp:63: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_common.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/printhardware.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/identifyavx512fmaunits.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_ocl.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/legacymdrunoptions.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclraii.h:44, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_ocl.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacysimulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacysimulator.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/legacysimulator.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/legacysimulator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/legacysimulator.cpp [ 86%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/md.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/md.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/md.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/md.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/md.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mdmodules.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/md.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/membedholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/membedholder.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/membedholder.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/membedholder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/membedholder.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mimic.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/minimize.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mimic.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/minimize.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/replicaexchange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/replicaexchange.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/replicaexchange.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/replicaexchange.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/replicaexchange.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/rerun.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/rerun.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/runner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/runner.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/runner.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/runner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/runner.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/shellfc.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/runner.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/shellfc.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/simulationcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/simulationcontext.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/simulationcontext.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/simulationcontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/simulationcontext.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/simulationinput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/tpi.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o -MF CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/freeenergy.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/tpi.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/handlerestart.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/threadaffinity.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o -MF CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o.d -o CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/state_propagator_data_gpu_impl_gpu.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o -MF CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o.d -o CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/abstractoption.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer.h:53, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/state_propagator_data_gpu_impl_gpu.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/options/behaviorcollection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmx_internal_xdr.cpp [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio.cpp [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio_xdr.cpp In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:39: In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/groio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/groio.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/libxdrf.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/matio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/matio.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/md5.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include 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/usr/lib64/libfftw3f.so -lflexiblas -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libgromacs.so.7.0.0 ../../lib/libgromacs.so.7 ../../lib/libgromacs.so gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Built target libgromacs /usr/bin/gmake -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/depend /usr/bin/gmake -f api/gmxapi/CMakeFiles/gmxapi.dir/build.make api/gmxapi/CMakeFiles/gmxapi.dir/depend /usr/bin/gmake -f api/nblib/CMakeFiles/nblib.dir/build.make api/nblib/CMakeFiles/nblib.dir/depend /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build 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/builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/share/template /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/share/template /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/share/template/CMakeFiles/template.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/build /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build /usr/bin/gmake -f api/nblib/CMakeFiles/nblib.dir/build.make api/nblib/CMakeFiles/nblib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/gmxapi/CMakeFiles/gmxapi.dir/build.make api/gmxapi/CMakeFiles/gmxapi.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Building CXX object share/template/CMakeFiles/template.dir/template.cpp.o [ 96%] Linking CXX executable ../../bin/gmx cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/share/template && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -MD -MT share/template/CMakeFiles/template.dir/template.cpp.o -MF CMakeFiles/template.dir/template.cpp.o.d -o CMakeFiles/template.dir/template.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/share/template/template.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmx.dir/link.txt --verbose=1 [ 96%] Building CXX object api/nblib/CMakeFiles/nblib.dir/box.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/box.cpp.o -MF CMakeFiles/nblib.dir/box.cpp.o.d -o CMakeFiles/nblib.dir/box.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/box.cpp [ 96%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/resourceassignment.cpp /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/gmx_objlib.dir/gmx.cpp.o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o CMakeFiles/view_objlib.dir/view/3dview.cpp.o CMakeFiles/view_objlib.dir/view/buttons.cpp.o CMakeFiles/view_objlib.dir/view/dialogs.cpp.o CMakeFiles/view_objlib.dir/view/fgrid.cpp.o CMakeFiles/view_objlib.dir/view/filter.cpp.o CMakeFiles/view_objlib.dir/view/logo.cpp.o CMakeFiles/view_objlib.dir/view/manager.cpp.o CMakeFiles/view_objlib.dir/view/molps.cpp.o CMakeFiles/view_objlib.dir/view/nleg.cpp.o CMakeFiles/view_objlib.dir/view/nmol.cpp.o CMakeFiles/view_objlib.dir/view/popup.cpp.o CMakeFiles/view_objlib.dir/view/pulldown.cpp.o CMakeFiles/view_objlib.dir/view/view.cpp.o CMakeFiles/view_objlib.dir/view/x11.cpp.o CMakeFiles/view_objlib.dir/view/xdlg.cpp.o CMakeFiles/view_objlib.dir/view/xdlghi.cpp.o CMakeFiles/view_objlib.dir/view/xdlgitem.cpp.o CMakeFiles/view_objlib.dir/view/xmb.cpp.o CMakeFiles/view_objlib.dir/view/xutil.cpp.o -o ../../bin/gmx -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib: ../../lib/libgromacs.so.7.0.0 /usr/lib64/libX11.so -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 96%] Building CXX object api/nblib/CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o -MF CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o.d -o CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/gmxcalculatorcpu.cpp [ 96%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/context.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/context.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/context.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/context.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/context.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/api/nblib/gmxcalculatorcpu.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 96%] Linking CXX executable ../../bin/template cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/template.dir/template.cpp.o -o ../../bin/template -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Built target template [ 96%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/exceptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/exceptions.cpp [ 96%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/gmxapi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/mdmodule.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/mdmodule.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/mdmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/mdmodule.cpp [ 96%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/mdsignals.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Built target gmx [ 96%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/session.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/session.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/session.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/session.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/session.cpp [ 96%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/status.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include 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-I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/system.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/system.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/system.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/system.cpp [ 98%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/version.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/version.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/version.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/version.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/version.cpp [ 98%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/workflow.cpp [ 98%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tpr.cpp [ 98%] Building CXX object api/nblib/CMakeFiles/nblib.dir/interactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/interactions.cpp.o -MF CMakeFiles/nblib.dir/interactions.cpp.o.d -o CMakeFiles/nblib.dir/interactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/interactions.cpp [ 98%] Building CXX object api/nblib/CMakeFiles/nblib.dir/molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/molecules.cpp.o -MF CMakeFiles/nblib.dir/molecules.cpp.o.d -o CMakeFiles/nblib.dir/molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/molecules.cpp [ 98%] Building CXX object api/nblib/CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o -MF CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o.d -o CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/nbnxmsetuphelpers.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/api/nblib/nbnxmsetuphelpers.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/particlesequencer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/particlesequencer.cpp.o -MF CMakeFiles/nblib.dir/particlesequencer.cpp.o.d -o CMakeFiles/nblib.dir/particlesequencer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/particlesequencer.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/particletype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/particletype.cpp.o -MF CMakeFiles/nblib.dir/particletype.cpp.o.d -o CMakeFiles/nblib.dir/particletype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/particletype.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/simulationstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/simulationstate.cpp.o -MF CMakeFiles/nblib.dir/simulationstate.cpp.o.d -o CMakeFiles/nblib.dir/simulationstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/simulationstate.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/topologyhelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/topologyhelpers.cpp.o -MF CMakeFiles/nblib.dir/topologyhelpers.cpp.o.d -o CMakeFiles/nblib.dir/topologyhelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/topologyhelpers.cpp [100%] Linking CXX shared library ../../lib/libgmxapi.so cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxapi.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmxapi.so.0 -o ../../lib/libgmxapi.so.0.3.1 CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o CMakeFiles/gmxapi.dir/cpp/context.cpp.o CMakeFiles/gmxapi.dir/cpp/exceptions.cpp.o CMakeFiles/gmxapi.dir/cpp/gmxapi.cpp.o CMakeFiles/gmxapi.dir/cpp/md.cpp.o CMakeFiles/gmxapi.dir/cpp/mdmodule.cpp.o CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o CMakeFiles/gmxapi.dir/cpp/session.cpp.o CMakeFiles/gmxapi.dir/cpp/status.cpp.o CMakeFiles/gmxapi.dir/cpp/system.cpp.o CMakeFiles/gmxapi.dir/cpp/version.cpp.o CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib: ../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/topology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/topology.cpp.o -MF CMakeFiles/nblib.dir/topology.cpp.o.d -o CMakeFiles/nblib.dir/topology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/topology.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/tpr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/tpr.cpp.o -MF CMakeFiles/nblib.dir/tpr.cpp.o.d -o CMakeFiles/nblib.dir/tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tpr.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/virials.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/virials.cpp.o -MF CMakeFiles/nblib.dir/virials.cpp.o.d -o CMakeFiles/nblib.dir/virials.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/virials.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o -MF CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o.d -o CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/calculator.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi && /usr/bin/cmake -E cmake_symlink_library ../../lib/libgmxapi.so.0.3.1 ../../lib/libgmxapi.so.0 ../../lib/libgmxapi.so gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target gmxapi [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include 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/builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/transformations.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/conversions.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o -MF CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o.d -o CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/convertGmxToNblib.cpp [100%] Building CXX object api/nblib/CMakeFiles/nblib.dir/util/setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/util/setup.cpp.o -MF CMakeFiles/nblib.dir/util/setup.cpp.o.d -o CMakeFiles/nblib.dir/util/setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/setup.cpp [100%] Linking CXX shared library ../../lib/libnblib_gmx.so cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libnblib_gmx.so.0 -o ../../lib/libnblib_gmx.so.0.1.0 CMakeFiles/nblib.dir/box.cpp.o CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o CMakeFiles/nblib.dir/integrator.cpp.o CMakeFiles/nblib.dir/interactions.cpp.o CMakeFiles/nblib.dir/molecules.cpp.o CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o CMakeFiles/nblib.dir/particlesequencer.cpp.o CMakeFiles/nblib.dir/particletype.cpp.o CMakeFiles/nblib.dir/simulationstate.cpp.o CMakeFiles/nblib.dir/topologyhelpers.cpp.o CMakeFiles/nblib.dir/topology.cpp.o CMakeFiles/nblib.dir/tpr.cpp.o CMakeFiles/nblib.dir/virials.cpp.o CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o CMakeFiles/nblib.dir/util/setup.cpp.o -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib: ../../lib/libgromacs.so.7.0.0 /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a -lm cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib && /usr/bin/cmake -E cmake_symlink_library ../../lib/libnblib_gmx.so.0.1.0 ../../lib/libnblib_gmx.so.0 ../../lib/libnblib_gmx.so gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target nblib /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/depend /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples/CMakeFiles/argon-forces-integration.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples/CMakeFiles/methane-water-integration.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/build /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Building CXX object api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o [100%] Building CXX object api/nblib/samples/CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -MD -MT api/nblib/samples/CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o -MF CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o.d -o CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples/methane-water-integration.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -MD -MT api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o -MF CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o.d -o CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples/argon-forces-integration.cpp [100%] Linking CXX executable ../../../bin/argon-forces-integration cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples && /usr/bin/cmake -E cmake_link_script CMakeFiles/argon-forces-integration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o" -o ../../../bin/argon-forces-integration -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../lib/libnblib_gmx.so.0.1.0 /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a -Wl,-rpath-link,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib [100%] Linking CXX executable ../../../bin/methane-water-integration cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples && /usr/bin/cmake -E cmake_link_script CMakeFiles/methane-water-integration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o" -o ../../../bin/methane-water-integration -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../lib/libnblib_gmx.so.0.1.0 /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a -Wl,-rpath-link,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target argon-forces-integration gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target methane-water-integration gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles 0 + popd ~/build/BUILD/gromacs-2022.3 + test -n '' + for mpi in '' mpich openmpi + test -n mpich + module load mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + mkdir -p mpich + pushd mpich ~/build/BUILD/gromacs-2022.3/mpich ~/build/BUILD/gromacs-2022.3 + test -z mpich + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ test -n mpich ++ echo -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_mpich -DGMX_LIBS_SUFFIX=_mpich -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib ++ test -z mpich ++ test -n '' ++ echo -DGMX_GPU=OpenCL + /usr/bin/cmake -S .. -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DCMAKE_SKIP_INSTALL_RPATH=ON -DGMX_BLAS_USER=flexiblas -DGMX_BUILD_UNITTESTS:BOOL=ON -DGMX_USE_LMFIT=EXTERNAL -DGMX_EXTERNAL_TNG:BOOL=ON -DGMX_EXTERNAL_TINYXML2:BOOL=OFF -DGMX_USE_MUPARSER=EXTERNAL -DGMX_LAPACK_USER=flexiblas -DGMX_USE_RDTSCP=OFF -DGMX_INSTALL_LEGACY_API=ON -DGMX_DSSP_PROGRAM_PATH=/usr/bin/dssp -DGMX_VERSION_STRING_OF_FORK=Fedora39 -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_mpich -DGMX_LIBS_SUFFIX=_mpich -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DGMX_GPU=OpenCL -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Python3_LIBRARIES Development Development.Module Development.Embed) (found suitable version "3.12.0", minimum required is "3.7") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Looking for fedisableexcept in m -- Looking for fedisableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Found MPI_CXX: /usr/lib64/mpich/lib/libmpicxx.so (found version "4.0") -- Found MPI: TRUE (found version "4.0") found components: CXX -- Using manually set binary suffix: "_mpich" -- Using manually set library suffix: "_mpich" -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Performing Test TEST_ATOMICS -- Performing Test TEST_ATOMICS - Success -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- GPU support with OpenCL is deprecated. It is still fully supported (and recommended for AMD and Intel GPUs). It may be replaced by different approaches in future releases of GROMACS. -- Looking for CL_VERSION_3_0 -- Looking for CL_VERSION_3_0 - found -- Found OpenCL: /usr/lib64/libOpenCL.so (found version "3.0") -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 1 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd sve -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Checking for system XDR support -- Checking for system XDR support - not present -- Checking for module 'fftw3f' -- Found fftw3f, version 3.3.10 -- Looking for fftwf_plan_many_dft in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_plan_many_dft_r2c in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft_r2c in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_plan_many_dft_c2r in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft_c2r in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_have_simd_sse in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_sse in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_sse in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_sse in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_sse2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_sse2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2_128 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx2_128 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx512 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx512 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_512 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx_512 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_kcvi in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_kcvi in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_altivec in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_altivec in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_neon in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_neon in /usr/lib64/libfftw3f.so - found -- Using external FFT library - FFTW3 -- Checking that user BLAS library flexiblas works -- Looking for dgemm_ -- Looking for dgemm_ - found -- Checking that user LAPACK library flexiblas works -- Looking for cheev_ -- Looking for cheev_ - found -- Could not convert sample image, ImageMagick convert can not be used. A possible way to fix it can be found here: https://alexvanderbist.com/2018/fixing-imagick-error-unauthorized -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE pygments) (Required is at least version "1.6.1") CMake Deprecation Warning at src/external/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Performing Test HAVE_NO_DEPRECATED_COPY -- Performing Test HAVE_NO_DEPRECATED_COPY - Success -- Performing Test HAS_WARNING_EVERYTHING -- Performing Test HAS_WARNING_EVERYTHING - Failed -- Performing Test HAS_NO_STRINGOP_TRUNCATION -- Performing Test HAS_NO_STRINGOP_TRUNCATION - Success -- Performing Test HAS_NO_REDUNDANT_MOVE -- Performing Test HAS_NO_REDUNDANT_MOVE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Performing Test HAS_NO_UNUSED_PARAMETER -- Performing Test HAS_NO_UNUSED_PARAMETER - Success -- Performing Test HAS_NO_MISSING_DECLARATIONS -- Performing Test HAS_NO_MISSING_DECLARATIONS - Success -- Performing Test HAS_NO_NULL_CONVERSIONS -- Performing Test HAS_NO_NULL_CONVERSIONS - Success -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Could NOT find clFFT (missing: clFFT_INCLUDE_DIR clFFT_LIBRARY) -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- Performing Test LMFIT_LINKS_OK -- Performing Test LMFIT_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (lmfit) does not match the name of the calling package (Lmfit). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindLmfit.cmake:83 (find_package_handle_standard_args) cmake/gmxManageLmfit.cmake:76 (find_package) src/gromacs/CMakeLists.txt:394 (gmx_manage_lmfit) This warning is for project developers. Use -Wno-dev to suppress it. -- Found lmfit: /usr/include (found version "8.2.2") -- Performing Test MUPARSER_LINKS_OK -- Performing Test MUPARSER_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (muparser) does not match the name of the calling package (Muparser). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindMuparser.cmake:79 (find_package_handle_standard_args) cmake/gmxManageMuparser.cmake:74 (find_package) src/gromacs/CMakeLists.txt:396 (gmx_manage_muparser) This warning is for project developers. Use -Wno-dev to suppress it. -- Found muparser: /usr/include (found version "2.3.4") -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Configuring done (23.5s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/accessors.cpp.o [ 0%] Generating release version information cd /builddir/build/BUILD/gromacs-2022.3 && /usr/bin/cmake -D PYTHON_EXECUTABLE=/usr/bin/python3.12 -D PROJECT_VERSION=2022.3-Fedora39 -D PROJECT_SOURCE_DIR=/builddir/build/BUILD/gromacs-2022.3 -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/accessors.cpp.o -MF CMakeFiles/clFFT.dir/library/accessors.cpp.o.d -o CMakeFiles/clFFT.dir/library/accessors.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/accessors.cpp [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/andersentemperaturecoupling.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/errhandler.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 0%] Built target release-version-info /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -MF CMakeFiles/linearalgebra.dir/eigensolver.cpp.o.d -o CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/eigensolver.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o cd 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/atomic.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/lock.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/pthreads.cpp [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -MF CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o.d -o CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/gmx_arpack.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/accessors.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 0%] Built target thread_mpi /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 0%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-unused -Wno-unused-parameter -Wno-missing-declarations -Wno-null-conversion -MD -MT src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o -MF CMakeFiles/scanner.dir/parser.cpp.o.d -o CMakeFiles/scanner.dir/parser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/parser.cpp [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o -MF CMakeFiles/clFFT.dir/library/action.transpose.cpp.o.d -o CMakeFiles/clFFT.dir/library/action.transpose.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/action.transpose.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/action.transpose.cpp:26: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -MF CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/checkpointhelper.cpp [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o -MF CMakeFiles/linearalgebra.dir/matrix.cpp.o.d -o CMakeFiles/linearalgebra.dir/matrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/matrix.cpp [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o -MF CMakeFiles/linearalgebra.dir/nrjac.cpp.o.d -o CMakeFiles/linearalgebra.dir/nrjac.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/nrjac.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/checkpointhelper.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o -MF CMakeFiles/clFFT.dir/library/enqueue.cpp.o.d -o CMakeFiles/clFFT.dir/library/enqueue.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/enqueue.cpp [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -MF CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o.d -o CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/sparsematrix.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/enqueue.cpp:19: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 0%] Built target linearalgebra /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 1%] Building CXX object src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -MF CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o.d -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/mdrun.cpp [ 1%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-unused -Wno-unused-parameter -Wno-missing-declarations -Wno-null-conversion -MD -MT src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o -MF CMakeFiles/scanner.dir/scanner.cpp.o.d -o CMakeFiles/scanner.dir/scanner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/scanner.cpp [ 1%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -MF CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/compositesimulatorelement.cpp [ 1%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o -MF CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o.d -o CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.h:23, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:21: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 1%] Built target scanner /usr/bin/gmake -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/CMakeFiles/view_objlib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 1%] Building CXX object src/programs/CMakeFiles/view_objlib.dir/view/view.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/view_objlib.dir/view/view.cpp.o -MF CMakeFiles/view_objlib.dir/view/view.cpp.o.d -o CMakeFiles/view_objlib.dir/view/view.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/view/view.cpp [ 1%] Building CXX object src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -MF CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o.d -o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/nonbonded_bench.cpp [ 1%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -MF CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o.d -o CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/computeglobalselement.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 1%] Built target view_objlib /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/CMakeFiles/gmx_objlib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 1%] Building CXX object src/programs/CMakeFiles/gmx_objlib.dir/gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -MD -MT src/programs/CMakeFiles/gmx_objlib.dir/gmx.cpp.o -MF CMakeFiles/gmx_objlib.dir/gmx.cpp.o.d -o CMakeFiles/gmx_objlib.dir/gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/gmx.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/computeglobalselement.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 1%] Building CXX object src/programs/CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -MD -MT src/programs/CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o -MF CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o.d -o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/legacymodules.cpp [ 1%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.copy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.copy.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.copy.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.copy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.copy.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 1%] Built target mdrun_objlib [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.copy.cpp:21: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 3%] Built target gmx_objlib [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.cpp:24: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.cpp:20: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o -MF CMakeFiles/modularsimulator.dir/constraintelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/constraintelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/constraintelement.cpp [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:28: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o -MF CMakeFiles/modularsimulator.dir/domdechelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/domdechelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/domdechelper.cpp [ 3%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o -MF CMakeFiles/modularsimulator.dir/energydata.cpp.o.d -o CMakeFiles/modularsimulator.dir/energydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/energydata.cpp [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o -MF CMakeFiles/clFFT.dir/library/lifetime.cpp.o.d -o CMakeFiles/clFFT.dir/library/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/lifetime.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/lifetime.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o -MF CMakeFiles/clFFT.dir/library/md5sum.cpp.o.d -o CMakeFiles/clFFT.dir/library/md5sum.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/md5sum.cpp [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/plan.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/plan.cpp.o -MF CMakeFiles/clFFT.dir/library/plan.cpp.o.d -o CMakeFiles/clFFT.dir/library/plan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/plan.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/plan.cpp:24: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/repo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/repo.cpp.o -MF CMakeFiles/clFFT.dir/library/repo.cpp.o.d -o CMakeFiles/clFFT.dir/library/repo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.cpp [ 3%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o -MF CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/expandedensembleelement.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.h:22, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/stdafx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/stdafx.cpp.o -MF CMakeFiles/clFFT.dir/library/stdafx.cpp.o.d -o CMakeFiles/clFFT.dir/library/stdafx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/stdafx.cpp [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/transform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/transform.cpp.o -MF CMakeFiles/clFFT.dir/library/transform.cpp.o.d -o CMakeFiles/clFFT.dir/library/transform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/transform.cpp [ 3%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/firstorderpressurecoupling.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/transform.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:27, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp:30: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:26: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 3%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/stdafx.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o -MF CMakeFiles/modularsimulator.dir/forceelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/forceelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/forceelement.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o -MF CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o.d -o CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/freeenergyperturbationdata.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -MF CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o.d -o CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/modularsimulator.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 5%] Built target clFFT [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/mttk.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/mttk.cpp.o -MF CMakeFiles/modularsimulator.dir/mttk.cpp.o.d -o CMakeFiles/modularsimulator.dir/mttk.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/mttk.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/modularsimulator.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o -MF CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o.d -o CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/nosehooverchains.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -MF CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o.d -o CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/parrinellorahmanbarostat.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -MF CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o -MF CMakeFiles/modularsimulator.dir/propagator.cpp.o.d -o CMakeFiles/modularsimulator.dir/propagator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/propagator.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o -MF CMakeFiles/modularsimulator.dir/pullelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/pullelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pullelement.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -MF CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o.d -o CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/referencetemperaturemanager.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o -MF CMakeFiles/modularsimulator.dir/signallers.cpp.o.d -o CMakeFiles/modularsimulator.dir/signallers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/signallers.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -MF CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o.d -o CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -MF CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o.d -o CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/statepropagatordata.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/statepropagatordata.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -MF CMakeFiles/modularsimulator.dir/topologyholder.cpp.o.d -o CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/topologyholder.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/topologyholder.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -MF CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/trajectoryelement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/velocityscalingtemperaturecoupling.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 7%] Built target modularsimulator /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 7%] Generating baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/VersionInfo.cmake -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion-gen.cpp.cmakein -D VERSION_OUT=utility/baseversion-gen.cpp -D GMX_SOURCE_DOI= -D GMX_RELEASE_HASH= -D GMX_SOURCE_HASH= -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxConfigureVersionInfo.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/basenetwork.cpp.o [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/any.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -MF CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/[ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/[ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_system.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp:61: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_system.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/freeenergydispatch.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/freeenergydispatch.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/grid.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gridset.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/grid.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gridset.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kerneldispatch.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gpu_data_mgmt.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kerneldispatch.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref_prune.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.cpp:36: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_setup.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_setup.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist_tuning.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist_tuning.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistparams.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistparams.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistset.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/prunekerneldispatch.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.h:56, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/prunekerneldispatch.cpp:38: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp:69: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_jit_support.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_jit_support.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/atomdistribution.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/atomdistribution.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/atomdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/atomdistribution.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/atomdistribution.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/box.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/box.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/box.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/box.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/box.cpp [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/cellsizes.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/box.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/collect.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/collect.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/collect.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/collect.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/collect.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/cellsizes.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/computemultibodycutoffs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/computemultibodycutoffs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/collect.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/distribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlbtiming.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/distribute.cpp:62: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlb.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlbtiming.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_constraints.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_network.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_constraints.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_network.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_setup.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_specatomcomm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_setup.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_specatomcomm.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_vsite.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/dump.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/dump.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/dump.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/dump.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dump.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_vsite.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/ga2la.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange_impl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dump.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomset.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange_impl.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomsetdata.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomsetmanager.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopology.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopology.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopologychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopologychecker.cpp [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/makebondedlinks.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopologychecker.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/makebondedlinks.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/mdsetup.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/mdsetup.cpp:38: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/nsgrid.cpp [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/partition.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/partition.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/partition.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/partition.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/partition.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/nsgrid.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/redistribute.cpp [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/reversetopology.cpp [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/utility.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/utility.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/utility.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/utility.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/partition.cpp:82: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/redistribute.cpp:60: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/reversetopology.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/math/3dtransforms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tables/forcetable.cpp.o -MF CMakeFiles/libgromacs.dir/tables/forcetable.cpp.o.d -o CMakeFiles/libgromacs.dir/tables/forcetable.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/forcetable.cpp [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o cd 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o -MF CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o.d -o CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/quadraticsplinetable.cpp [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o -MF CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o.d -o CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/splineutil.cpp [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidegpuusage.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidegpuusage.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o.d -o 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/reportgpuusage.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidesimulationworkload.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/reportgpuusage.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.cpp [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/taskassignment.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/usergpuids.cpp [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o -MF CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o.d -o CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/cyclecounter.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/taskassignment.cpp:60: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o -MF CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o.d -o CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/wallcycle.cpp [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/timing/walltime_accounting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull_rotation.cpp.o -MF CMakeFiles/libgromacs.dir/pulling/pull_rotation.cpp.o.d -o CMakeFiles/libgromacs.dir/pulling/pull_rotation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/pull_rotation.cpp [ 49%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullcoordexpressionparser.cpp.o 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullutil.cpp.o -MF CMakeFiles/libgromacs.dir/pulling/pullutil.cpp.o.d -o CMakeFiles/libgromacs.dir/pulling/pullutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/pullutil.cpp [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/pulling/transformationcoordinate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/imd/imd.cpp.o -MF CMakeFiles/libgromacs.dir/imd/imd.cpp.o.d -o CMakeFiles/libgromacs.dir/imd/imd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/imd.cpp [ 50%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/imd/imdsocket.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/grompp.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/grompp.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/grompp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/grompp.cpp [ 61%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/h_db.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/grompp.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 61%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/hackblock.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o -MF CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/pme_error.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/pme_error.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o -MF CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tune_pme.cpp [ 71%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o -MF CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/conformation_utilities.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tune_pme.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 71%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/network.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/calc_verletbuf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calc_verletbuf.cpp [ 71%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calcmu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calc_verletbuf.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/constr.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/force.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/force.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/force.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/forcerec.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/freeenergyparameters.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/forcerec.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gmx_omp_nthreads.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction_impl_stubs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction_impl_stubs.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/groupcoord.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/lincs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/lincs.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/md_support.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/md_support.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdatoms.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdatoms.cpp:42: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdebin_bar.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdoutf.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/membed.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/perf_est.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/rbin.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/perf_est.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/resethandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/resethandler.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/resethandler.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/sim_util.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/simulationsignal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/simulationsignal.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/simulationsignal.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/simulationsignal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/simulationsignal.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/sim_util.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/splitter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/splitter.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/splitter.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/splitter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/splitter.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stat.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/stat.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/stat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/stat.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/stophandler.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/stat.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/tgroup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/trajectory_writing.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/trajectory_writing.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/trajectory_writing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/trajectory_writing.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/update.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/update.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu_impl_stubs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu_impl_stubs.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/wall.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/vsite.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingforceprovider.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingoptions.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:46: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:229:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:226:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoutputprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoutputprovider.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoutputprovider.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoutputprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingoutputprovider.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o cd 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src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmmoptions.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmforceprovider_stub.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmforceprovider_stub.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmforceprovider_stub.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmmforceprovider_stub.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmm.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/listed_forces_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/listed_forces/listed_forces_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/listed_forces_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu_impl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu.h:52, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu_impl.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/orires.cpp.o -MF CMakeFiles/libgromacs.dir/listed_forces/orires.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/orires.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/orires.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu.h:52, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/manage_threading.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/position_restraints.cpp.o -MF CMakeFiles/libgromacs.dir/listed_forces/position_restraints.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/position_restraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/position_restraints.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/restcbt.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/restcbt.cpp.o -MF CMakeFiles/libgromacs.dir/listed_forces/restcbt.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/restcbt.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/restcbt.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_data_mgmt.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer.h:53, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_types.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_data_mgmt.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_buffer_ops.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream.h:56, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_buffer_ops.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/calculate_spline_moduli.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/calculate_spline_moduli.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/calculate_spline_moduli.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/calculate_spline_moduli.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/calculate_spline_moduli.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/ewald.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/ewald.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/ewald_utils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gather.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gather.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gather.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gather.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_grid.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.cpp:69: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_load_balancing.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_grid.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_load_balancing.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_only.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_only.cpp:73: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_redistribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_solve.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o cd 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_spline_work.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spline_work.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spread.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spread.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu_impl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu_impl.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu_impl.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_types_host.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_ocl_stubs.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_timings.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o -MF CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/calcgrid.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_timings.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/parallel_3dfft.cpp.o -MF CMakeFiles/libgromacs.dir/fft/parallel_3dfft.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/parallel_3dfft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/parallel_3dfft.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -MF CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o -MF CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/fft_fftw3.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/clfftinitializer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_impl.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_manager.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/clfftinitializer.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_manager.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context_ocl.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/device_stream_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_ocl.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/pmalloc_ocl.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_compiler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/cpuinfo.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/detecthardware.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_common.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/hardwaretopology.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/detecthardware.cpp:63: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_common.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/identifyavx512fmaunits.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_ocl.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/legacymdrunoptions.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclraii.h:44, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_ocl.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacysimulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/md.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/md.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/md.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/md.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/md.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mdmodules.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/md.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/membedholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mimic.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/minimize.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mimic.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/minimize.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/replicaexchange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/rerun.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/rerun.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/runner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/shellfc.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/runner.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/shellfc.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/simulationcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/simulationinput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/simulatorbuilder.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/tpi.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o -MF CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/freeenergy.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/tpi.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/handlerestart.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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CMakeFiles/libgromacs.dir/mdrunutility/threadaffinity.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/threadaffinity.cpp [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o -MF CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o.d -o CMakeFiles/libgromacs.dir/mdtypes/state_propagator_data_gpu_impl_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/state_propagator_data_gpu_impl_gpu.cpp [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o -MF CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o.d -o CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/abstractoption.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer.h:53, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/state_propagator_data_gpu_impl_gpu.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio_xdr.cpp In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:39: In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/groio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/groio.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/libxdrf.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/matio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/matio.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/md5.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include 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'/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Building CXX object share/template/CMakeFiles/template.dir/template.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/share/template && /usr/bin/g++ -DGMX_DOUBLE=0 -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -MD -MT share/template/CMakeFiles/template.dir/template.cpp.o -MF CMakeFiles/template.dir/template.cpp.o.d -o CMakeFiles/template.dir/template.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/share/template/template.cpp [100%] Linking CXX executable ../../bin/gmx_mpich cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmx.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/gmx_objlib.dir/gmx.cpp.o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o CMakeFiles/view_objlib.dir/view/view.cpp.o -o ../../bin/gmx_mpich -Wl,-rpath,/usr/lib64/mpich/lib: ../../lib/libgromacs_mpich.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so [100%] Linking CXX executable ../../bin/template cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/template.dir/template.cpp.o -o ../../bin/template -Wl,-rpath,/usr/lib64/mpich/lib ../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target template /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target gmx gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles 0 + popd ~/build/BUILD/gromacs-2022.3 + test -n mpich + module unload mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for mpi in '' mpich openmpi + test -n openmpi + module load mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + mkdir -p openmpi + pushd openmpi ~/build/BUILD/gromacs-2022.3/openmpi ~/build/BUILD/gromacs-2022.3 + test -z openmpi + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ test -n openmpi ++ echo -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_openmpi -DGMX_LIBS_SUFFIX=_openmpi -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib ++ test -z openmpi ++ test -n '' ++ echo -DGMX_GPU=OpenCL + /usr/bin/cmake -S .. -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DCMAKE_SKIP_INSTALL_RPATH=ON -DGMX_BLAS_USER=flexiblas -DGMX_BUILD_UNITTESTS:BOOL=ON -DGMX_USE_LMFIT=EXTERNAL -DGMX_EXTERNAL_TNG:BOOL=ON -DGMX_EXTERNAL_TINYXML2:BOOL=OFF -DGMX_USE_MUPARSER=EXTERNAL -DGMX_LAPACK_USER=flexiblas -DGMX_USE_RDTSCP=OFF -DGMX_INSTALL_LEGACY_API=ON -DGMX_DSSP_PROGRAM_PATH=/usr/bin/dssp -DGMX_VERSION_STRING_OF_FORK=Fedora39 -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_openmpi -DGMX_LIBS_SUFFIX=_openmpi -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DGMX_GPU=OpenCL -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Python3_LIBRARIES Development Development.Module Development.Embed) (found suitable version "3.12.0", minimum required is "3.7") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Looking for fedisableexcept in m -- Looking for fedisableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Found MPI_CXX: /usr/lib64/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") found components: CXX -- GROMACS library will use OpenMPI 4.1.5 -- Using manually set binary suffix: "_openmpi" -- Using manually set library suffix: "_openmpi" -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Performing Test TEST_ATOMICS -- Performing Test TEST_ATOMICS - Success -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- GPU support with OpenCL is deprecated. It is still fully supported (and recommended for AMD and Intel GPUs). It may be replaced by different approaches in future releases of GROMACS. -- Looking for CL_VERSION_3_0 -- Looking for CL_VERSION_3_0 - found -- Found OpenCL: /usr/lib64/libOpenCL.so (found version "3.0") -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 1 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd sve -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Checking for system XDR support -- Checking for system XDR support - not present -- Checking for module 'fftw3f' -- Found fftw3f, version 3.3.10 -- Looking for fftwf_plan_many_dft in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_plan_many_dft_r2c in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft_r2c in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_plan_many_dft_c2r in /usr/lib64/libfftw3f.so -- Looking for fftwf_plan_many_dft_c2r in /usr/lib64/libfftw3f.so - found -- Looking for fftwf_have_simd_sse in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_sse in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_sse in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_sse in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_sse2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_sse2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_sse2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_sse2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx2 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx2_128 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx2_128 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx512 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx512 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx_128_fma in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_avx_512 in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_avx_512 in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_kcvi in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_kcvi in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_altivec in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_altivec in /usr/lib64/libfftw3f.so - not found -- Looking for fftwf_have_simd_neon in /usr/lib64/libfftw3f.so -- Looking for fftwf_have_simd_neon in /usr/lib64/libfftw3f.so - found -- Using external FFT library - FFTW3 -- Checking that user BLAS library flexiblas works -- Looking for dgemm_ -- Looking for dgemm_ - found -- Checking that user LAPACK library flexiblas works -- Looking for cheev_ -- Looking for cheev_ - found -- Could not convert sample image, ImageMagick convert can not be used. A possible way to fix it can be found here: https://alexvanderbist.com/2018/fixing-imagick-error-unauthorized -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE pygments) (Required is at least version "1.6.1") CMake Deprecation Warning at src/external/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Performing Test HAVE_NO_DEPRECATED_COPY -- Performing Test HAVE_NO_DEPRECATED_COPY - Success -- Performing Test HAS_WARNING_EVERYTHING -- Performing Test HAS_WARNING_EVERYTHING - Failed -- Performing Test HAS_NO_STRINGOP_TRUNCATION -- Performing Test HAS_NO_STRINGOP_TRUNCATION - Success -- Performing Test HAS_NO_REDUNDANT_MOVE -- Performing Test HAS_NO_REDUNDANT_MOVE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Performing Test HAS_NO_UNUSED_PARAMETER -- Performing Test HAS_NO_UNUSED_PARAMETER - Success -- Performing Test HAS_NO_MISSING_DECLARATIONS -- Performing Test HAS_NO_MISSING_DECLARATIONS - Success -- Performing Test HAS_NO_NULL_CONVERSIONS -- Performing Test HAS_NO_NULL_CONVERSIONS - Success -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Could NOT find clFFT (missing: clFFT_INCLUDE_DIR clFFT_LIBRARY) -- Checking for dlopen -- Performing Test HAVE_DLOPEN -- Performing Test HAVE_DLOPEN - Success -- Checking for dlopen - found -- Performing Test LMFIT_LINKS_OK -- Performing Test LMFIT_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (lmfit) does not match the name of the calling package (Lmfit). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindLmfit.cmake:83 (find_package_handle_standard_args) cmake/gmxManageLmfit.cmake:76 (find_package) src/gromacs/CMakeLists.txt:394 (gmx_manage_lmfit) This warning is for project developers. Use -Wno-dev to suppress it. -- Found lmfit: /usr/include (found version "8.2.2") -- Performing Test MUPARSER_LINKS_OK -- Performing Test MUPARSER_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (muparser) does not match the name of the calling package (Muparser). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindMuparser.cmake:79 (find_package_handle_standard_args) cmake/gmxManageMuparser.cmake:74 (find_package) src/gromacs/CMakeLists.txt:396 (gmx_manage_muparser) This warning is for project developers. Use -Wno-dev to suppress it. -- Found muparser: /usr/include (found version "2.3.4") -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Configuring done (27.8s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs 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/builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/errhandler.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/tmpi_malloc.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/checkpointhelper.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 0%] Built target thread_mpi /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -MF CMakeFiles/linearalgebra.dir/eigensolver.cpp.o.d -o CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/eigensolver.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/accessors.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -MF CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o.d -o CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/gmx_arpack.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/checkpointhelper.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o -MF CMakeFiles/clFFT.dir/library/action.transpose.cpp.o.d -o CMakeFiles/clFFT.dir/library/action.transpose.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/action.transpose.cpp [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -MF CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/compositesimulatorelement.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/action.transpose.cpp:26: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -MF CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o.d -o CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/computeglobalselement.cpp [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o -MF CMakeFiles/modularsimulator.dir/constraintelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/constraintelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/constraintelement.cpp [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o -MF CMakeFiles/linearalgebra.dir/matrix.cpp.o.d -o CMakeFiles/linearalgebra.dir/matrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/matrix.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/computeglobalselement.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o -MF CMakeFiles/clFFT.dir/library/enqueue.cpp.o.d -o CMakeFiles/clFFT.dir/library/enqueue.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/enqueue.cpp [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o -MF CMakeFiles/linearalgebra.dir/nrjac.cpp.o.d -o CMakeFiles/linearalgebra.dir/nrjac.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/nrjac.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/enqueue.cpp:19: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -MF CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o.d -o CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/sparsematrix.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 0%] Built target linearalgebra /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 0%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-unused -Wno-unused-parameter -Wno-missing-declarations -Wno-null-conversion -MD -MT src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o -MF CMakeFiles/scanner.dir/parser.cpp.o.d -o CMakeFiles/scanner.dir/parser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/parser.cpp [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o -MF CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o.d -o CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.h:23, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/fft_binary_lookup.cpp:21: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o -MF CMakeFiles/modularsimulator.dir/domdechelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/domdechelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/domdechelper.cpp [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o -MF CMakeFiles/modularsimulator.dir/energydata.cpp.o.d -o CMakeFiles/modularsimulator.dir/energydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/energydata.cpp [ 0%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.copy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.copy.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.copy.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.copy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.copy.cpp [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o -MF CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/expandedensembleelement.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.copy.cpp:21: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 0%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-unused -Wno-unused-parameter -Wno-missing-declarations -Wno-null-conversion -MD -MT src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o -MF CMakeFiles/scanner.dir/scanner.cpp.o.d -o CMakeFiles/scanner.dir/scanner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/scanner.cpp [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/firstorderpressurecoupling.cpp [ 1%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library 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'/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 1%] Built target scanner /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 3%] Building CXX object src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -MF CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o.d -o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/mdrun.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o -MF CMakeFiles/modularsimulator.dir/forceelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/forceelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/forceelement.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.stockham.cpp:20: 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src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -MF CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o.d -o CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/modularsimulator.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 5%] Built target view_objlib /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -MD -MT src/programs/CMakeFiles/gmx_objlib.dir/gmx.cpp.o -MF CMakeFiles/gmx_objlib.dir/gmx.cpp.o.d -o CMakeFiles/gmx_objlib.dir/gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/gmx.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/modularsimulator.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/mttk.cpp.o -MF CMakeFiles/modularsimulator.dir/mttk.cpp.o.d -o CMakeFiles/modularsimulator.dir/mttk.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/mttk.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o -MF CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o.d -o CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/nosehooverchains.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -MF CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o.d -o CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/parrinellorahmanbarostat.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -MF CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o -MF CMakeFiles/modularsimulator.dir/propagator.cpp.o.d -o CMakeFiles/modularsimulator.dir/propagator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/propagator.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pullelement.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -MF CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o.d -o CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/referencetemperaturemanager.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o -MF CMakeFiles/modularsimulator.dir/signallers.cpp.o.d -o CMakeFiles/modularsimulator.dir/signallers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/signallers.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -MF CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o.d -o CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -MF CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o.d -o CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/statepropagatordata.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/statepropagatordata.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.cpp:24: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -MF CMakeFiles/modularsimulator.dir/topologyholder.cpp.o.d -o CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/topologyholder.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/topologyholder.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -MF CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/trajectoryelement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/velocityscalingtemperaturecoupling.cpp [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o -MF CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o.d -o CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/generator.transpose.gcn.cpp:28: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o -MF CMakeFiles/clFFT.dir/library/lifetime.cpp.o.d -o CMakeFiles/clFFT.dir/library/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/lifetime.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/lifetime.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o -MF CMakeFiles/clFFT.dir/library/md5sum.cpp.o.d -o CMakeFiles/clFFT.dir/library/md5sum.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/md5sum.cpp [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/plan.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/plan.cpp.o -MF CMakeFiles/clFFT.dir/library/plan.cpp.o.d -o CMakeFiles/clFFT.dir/library/plan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/plan.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/plan.cpp:24: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/repo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/repo.cpp.o -MF CMakeFiles/clFFT.dir/library/repo.cpp.o.d -o CMakeFiles/clFFT.dir/library/repo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 7%] Built target modularsimulator [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/stdafx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/stdafx.cpp.o -MF CMakeFiles/clFFT.dir/library/stdafx.cpp.o.d -o CMakeFiles/clFFT.dir/library/stdafx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/stdafx.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.h:22, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/repo.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/transform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/transform.cpp.o -MF CMakeFiles/clFFT.dir/library/transform.cpp.o.d -o CMakeFiles/clFFT.dir/library/transform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/transform.cpp [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/private.h:29, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library/transform.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.h:27, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.CPU.cpp:30: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.cpp [ 7%] Building CXX object src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build && /usr/bin/g++ -DGMX_DOUBLE=0 -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/library -I/builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -w -MD -MT src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o -MF CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o.d -o CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/stdafx.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.h:21, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.extern.cpp:22: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/../include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.h:25, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/statTimer/statisticalTimer.GPU.cpp:26: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 7%] Built target clFFT /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 7%] Generating baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/VersionInfo.cmake -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion-gen.cpp.cmakein -D VERSION_OUT=utility/baseversion-gen.cpp -D GMX_SOURCE_DOI= -D GMX_RELEASE_HASH= -D GMX_SOURCE_HASH= -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxConfigureVersionInfo.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/basenetwork.cpp.o [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/any.cpp.o [ 7%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o -MF CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/alignedallocator.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/any.cpp.o -MF CMakeFiles/libgromacs.dir/utility/any.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/any.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/any.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -MF CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o -MF CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/ikeyvaluetreeerror.cpp [ 8%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/init.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o -MF CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/int64_to_int.cpp [ 8%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -MF CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/keyvaluetree.cpp [ 8%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreemdpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 12%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 15%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -speIn file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ cs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 21%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp [ 28%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -speIn file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ cs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp [ 31%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_system.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_system.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/freeenergydispatch.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_system.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/benchmark/bench_setup.cpp:61: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/freeenergydispatch.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/grid.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/gridset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gridset.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/grid.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gridset.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernel_common.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kerneldispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kerneldispatch.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_gpu_ref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/gpu_data_mgmt.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kerneldispatch.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_gpu_ref.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref.cpp:36: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_reference/kernel_ref_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref_prune.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_reference/kernel_ref_prune.cpp:39: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_geometry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_setup.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_setup.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlist_tuning.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist_tuning.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlist_tuning.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlistparams.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistparams.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistparams.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairlistset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairlistset.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/prunekerneldispatch.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.h:56, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/pairsearch.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/prunekerneldispatch.cpp:38: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_gpu_buffer_ops_internal_ocl.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp:69: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/opencl/nbnxm_ocl_jit_support.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_jit_support.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_jit_support.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinehelpcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/atomdistribution.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/atomdistribution.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/atomdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/atomdistribution.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/atomdistribution.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/box.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/cellsizes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/cellsizes.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/box.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/collect.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/collect.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/collect.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/collect.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/collect.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/cellsizes.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/computemultibodycutoffs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/computemultibodycutoffs.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/computemultibodycutoffs.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/computemultibodycutoffs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/computemultibodycutoffs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/collect.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 36%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/distribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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object src/gromacs/CMakeFiles/libgromacs.dir/domdec/dlb.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/dlb.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/dlb.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/dlb.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlb.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/dlbtiming.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlbtiming.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlbtiming.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dlb.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/distribute.cpp:62: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.cpp:37: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_constraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_constraints.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_network.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_network.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_constraints.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_network.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/domdec_specatomcomm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_specatomcomm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_setup.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_specatomcomm.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/domdec_vsite.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/dump.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/dump.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/dump.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/dump.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dump.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_vsite.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/ga2la.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/ga2la.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/dump.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/gpuhaloexchange_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange_impl.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localatomset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomset.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/gpuhaloexchange_impl.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localatomsetmanager.cpp [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/localtopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopology.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopology.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 38%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/localtopologychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopologychecker.cpp [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/makebondedlinks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/makebondedlinks.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/localtopologychecker.cpp:52: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/makebondedlinks.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/mdsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/nsgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/nsgrid.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/mdsetup.cpp:38: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/partition.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/partition.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/partition.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/partition.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/partition.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/nsgrid.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/redistribute.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/redistribute.cpp [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/reversetopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/reversetopology.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/partition.cpp:82: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/domdec/utility.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/domdec/utility.cpp.o -MF CMakeFiles/libgromacs.dir/domdec/utility.cpp.o.d -o CMakeFiles/libgromacs.dir/domdec/utility.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/reversetopology.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/redistribute.cpp:60: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/utility.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/math/3dtransforms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/math/3dtransforms.cpp.o -MF CMakeFiles/libgromacs.dir/math/3dtransforms.cpp.o.d -o CMakeFiles/libgromacs.dir/math/3dtransforms.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/3dtransforms.cpp [ 40%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/math/coordinatetransformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o -MF CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o.d -o CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/quadraticsplinetable.cpp [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o -MF CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o.d -o CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/splineutil.cpp [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidegpuusage.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidegpuusage.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidesimulationworkload.cpp [ 45%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/findallgputasks.cpp [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/reportgpuusage.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidesimulationworkload.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/reportgpuusage.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.cpp [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/taskassignment.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/resourcedivision.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/usergpuids.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/taskassignment.cpp:60: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 47%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/h_db.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/h_db.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/grompp.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/modules/displacement.cpp.o -MF CMakeFiles/libgromacs.dir/analysisdata/modules/displacement.cpp.o.d -o CMakeFiles/libgromacs.dir/analysisdata/modules/displacement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/modules/displacement.cpp [ 66%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/modules/frameaverager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/make_ndx.cpp.o -MF CMakeFiles/libgromacs.dir/tools/make_ndx.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/make_ndx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/make_ndx.cpp [ 71%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o [ 71%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o -MF CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/mk_angndx.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o -MF CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o.d -o CMakeFiles/libgromacs.dir/tools/pme_error.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/pme_error.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/pme_error.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 71%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/tools/report_methods.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o -MF CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxlib/conformation_utilities.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/conformation_utilities.cpp In file included from /usr/include/CL/cl.h:20, from 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/calcmu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calcmu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calc_verletbuf.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/calcvir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/calcvir.cpp [ 73%] Building CXX object 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/checkpointhandler.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/checkpointhandler.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/checkpointhandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/checkpointhandler.cpp [ 73%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/compute_io.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/constr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/constr.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/force.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/force.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/force.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/force.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/forcerec.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/forcerec.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/freeenergyparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/freeenergyparameters.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/forcerec.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gmx_omp_nthreads.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/gpuforcereduction_impl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction_impl_stubs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/gpuforcereduction_impl_stubs.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/groupcoord.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/groupcoord.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/lincs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/lincs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/lincs.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/md_support.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/md_support.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/md_support.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdatoms.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdebin_bar.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/mdatoms.cpp:42: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/membed.cpp [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/perf_est.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/perf_est.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_geometry.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/perf_est.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rbin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/rf_util.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/rf_util.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/rf_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/rf_util.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/resethandler.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/sighandler.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/sighandler.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/sighandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/sighandler.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/sim_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/sim_util.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/sim_util.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/stophandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/stophandler.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/stat.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/tgroup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/update_constrain_gpu_impl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu_impl_stubs.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/update_constrain_gpu_impl_stubs.cpp:46: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/vsite.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/vsite.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/vsite.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/vsite.cpp [ 78%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/wall.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/wall.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/vsite.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingparameters.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmminputgenerator.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:46: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:229:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:226:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include 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src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmmtopologypreprocessor.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmm.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmm.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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CMakeFiles/libgromacs.dir/listed_forces/listed_forces.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/listed_forces.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu.h:52, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu_impl.cpp:50: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/listed_internal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_internal.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/manage_threading.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/manage_threading.cpp.o -MF CMakeFiles/libgromacs.dir/listed_forces/manage_threading.cpp.o.d -o CMakeFiles/libgromacs.dir/listed_forces/manage_threading.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/manage_threading.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/listed_forces_gpu.h:52, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/manage_threading.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/listed_forces/orires.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_data_mgmt.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_data_mgmt.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/nbnxm_gpu_buffer_ops.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_buffer_ops.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer.h:53, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/opencl/nbnxm_ocl_types.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_data_mgmt.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream.h:56, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm_gpu_buffer_ops.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/calculate_spline_moduli.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/calculate_spline_moduli.cpp [ 82%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/ewald.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gather.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_grid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_grid.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.cpp:69: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_load_balancing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_load_balancing.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_grid.cpp:43: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_load_balancing.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_only.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_pp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_only.cpp:73: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_redistribute.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_solve.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_spread.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spread.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_spread.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_pp_comm_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu_impl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_coordinate_receiver_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu_impl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_pp_comm_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_force_sender_gpu_impl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu_impl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_coordinate_receiver_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_program_impl_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_program_impl_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_force_sender_gpu_impl.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_ocl_stubs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_ocl_stubs.cpp [ 84%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_internal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_types_host.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_ocl_stubs.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o -MF CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o.d -o CMakeFiles/libgromacs.dir/ewald/pme_gpu_timings.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_timings.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o -MF CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/calcgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/calcgrid.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_internal.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme_gpu_timings.cpp:48: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -MF CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o -MF CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/fft_fftw3.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/gpu_3dfft_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/clfftinitializer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_impl.h:46, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_manager.cpp In file included from /usr/include/CL/cl.h:20, from /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src/include/clFFT.h:33, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/clfftinitializer.cpp:54: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_manager.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/hostallocator.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/gpu_utils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/device_context_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/pmalloc_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/pmalloc_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context_ocl.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_compiler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/ocl_caching.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_stream_ocl.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_compiler.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/ocl_caching.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o -MF CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o.d -o CMakeFiles/libgromacs.dir/gpu_utils/oclutils.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/cpuinfo.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclutils.cpp:41: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/detecthardware.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_common.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/hardwaretopology.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/detecthardware.cpp:63: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_common.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/identifyavx512fmaunits.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/device_management_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_ocl.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/legacymdrunoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/legacymdrunoptions.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/oclraii.h:44, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_ocl.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/legacysimulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/md.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/md.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/md.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/md.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/md.cpp [ 87%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/mdmodules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mdmodules.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/md.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/membedholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mimic.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/minimize.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/mimic.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/minimize.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/replicaexchange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/rerun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/rerun.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/rerun.cpp:55: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/runner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o -MF CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o.d -o CMakeFiles/libgromacs.dir/mdrun/shellfc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/shellfc.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/runner.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/shellfc.cpp:47: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/simulationcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/simulationinput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/simulatorbuilder.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrun/tpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/tpi.cpp [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/freeenergy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/freeenergy.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/tpi.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 89%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdrunutility/handlerestart.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o -MF CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o.d -o CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/abstractsection.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer.h:53, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/state_propagator_data_gpu_impl_gpu.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/options/basicoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio.cpp [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio_xdr.cpp In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:39: In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/groio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/groio.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/libxdrf.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, float**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/gromacs/../external/clFFT/src/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/matio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/matio.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/md5.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include 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-specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/gmx_objlib.dir/gmx.cpp.o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o CMakeFiles/view_objlib.dir/view/view.cpp.o -o ../../bin/gmx_openmpi -Wl,-rpath,/usr/lib64/openmpi/lib: ../../lib/libgromacs_openmpi.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so [100%] Linking CXX executable ../../bin/template cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects 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/usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target template /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target gmx gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles 0 + popd ~/build/BUILD/gromacs-2022.3 + test -n openmpi + module unload mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for p in '' _d + for mpi in '' mpich openmpi + test -n '' + mkdir -p serial_d + pushd serial_d ~/build/BUILD/gromacs-2022.3/serial_d ~/build/BUILD/gromacs-2022.3 + test -z '' + cp -al ../regressiontests-2022.3 tests/ + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ test -n '' ++ echo -DGMX_X11=ON ++ test -z '' ++ echo -DREGRESSIONTEST_PATH=/builddir/build/BUILD/gromacs-2022.3/serial_d/tests ++ test -n _d ++ echo -DGMX_DOUBLE:BOOL=ON + /usr/bin/cmake -S .. -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DCMAKE_SKIP_INSTALL_RPATH=ON -DGMX_BLAS_USER=flexiblas -DGMX_BUILD_UNITTESTS:BOOL=ON -DGMX_USE_LMFIT=EXTERNAL -DGMX_EXTERNAL_TNG:BOOL=ON -DGMX_EXTERNAL_TINYXML2:BOOL=OFF -DGMX_USE_MUPARSER=EXTERNAL -DGMX_LAPACK_USER=flexiblas -DGMX_USE_RDTSCP=OFF -DGMX_INSTALL_LEGACY_API=ON -DGMX_DSSP_PROGRAM_PATH=/usr/bin/dssp -DGMX_VERSION_STRING_OF_FORK=Fedora39 -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_X11=ON -DREGRESSIONTEST_PATH=/builddir/build/BUILD/gromacs-2022.3/serial_d/tests -DGMX_DOUBLE:BOOL=ON -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Python3_LIBRARIES Development Development.Module Development.Embed) (found suitable version "3.12.0", minimum required is "3.7") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Looking for fedisableexcept in m -- Looking for fedisableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Checking for module 'mpi-c' -- Package 'mpi-c', required by 'virtual:world', not found -- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) -- Checking for module 'mpi-cxx' -- Package 'mpi-cxx', required by 'virtual:world', not found -- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) -- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND) -- Using default binary suffix: "_d" -- Using default library suffix: "_d" -- Found X11: /usr/include -- Looking for XOpenDisplay in /usr/lib64/libX11.so -- Looking for XOpenDisplay in /usr/lib64/libX11.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Performing Test TEST_ATOMICS -- Performing Test TEST_ATOMICS - Success -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 1 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd sve -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Checking for system XDR support -- Checking for system XDR support - not present -- Checking for module 'fftw3' -- Found fftw3, version 3.3.10 -- Looking for fftw_plan_many_dft in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft in /usr/lib64/libfftw3.so - found -- Looking for fftw_plan_many_dft_r2c in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft_r2c in /usr/lib64/libfftw3.so - found -- Looking for fftw_plan_many_dft_c2r in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft_c2r in /usr/lib64/libfftw3.so - found -- Looking for fftw_have_simd_sse in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_sse in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_sse in /usr/lib64/libfftw3.so -- Looking for fftw_have_sse in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_sse2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_sse2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_sse2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_sse2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx2_128 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx2_128 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx512 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx512 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx_128_fma in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx_128_fma in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx_512 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx_512 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_kcvi in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_kcvi in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_neon in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_neon in /usr/lib64/libfftw3.so - found -- Using external FFT library - FFTW3 -- Checking that user BLAS library flexiblas works -- Looking for dgemm_ -- Looking for dgemm_ - found -- Checking that user LAPACK library flexiblas works -- Looking for cheev_ -- Looking for cheev_ - found -- Could not convert sample image, ImageMagick convert can not be used. A possible way to fix it can be found here: https://alexvanderbist.com/2018/fixing-imagick-error-unauthorized -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE pygments) (Required is at least version "1.6.1") -- Performing Test HAS_WARNING_EVERYTHING -- Performing Test HAS_WARNING_EVERYTHING - Failed CMake Deprecation Warning at src/external/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Performing Test HAVE_NO_DEPRECATED_COPY -- Performing Test HAVE_NO_DEPRECATED_COPY - Success -- Performing Test HAS_NO_STRINGOP_TRUNCATION -- Performing Test HAS_NO_STRINGOP_TRUNCATION - Success -- Performing Test HAS_NO_REDUNDANT_MOVE -- Performing Test HAS_NO_REDUNDANT_MOVE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Performing Test HAS_NO_UNUSED_PARAMETER -- Performing Test HAS_NO_UNUSED_PARAMETER - Success -- Performing Test HAS_NO_MISSING_DECLARATIONS -- Performing Test HAS_NO_MISSING_DECLARATIONS - Success -- Performing Test HAS_NO_NULL_CONVERSIONS -- Performing Test HAS_NO_NULL_CONVERSIONS - Success -- Performing Test LMFIT_LINKS_OK -- Performing Test LMFIT_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (lmfit) does not match the name of the calling package (Lmfit). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindLmfit.cmake:83 (find_package_handle_standard_args) cmake/gmxManageLmfit.cmake:76 (find_package) src/gromacs/CMakeLists.txt:394 (gmx_manage_lmfit) This warning is for project developers. Use -Wno-dev to suppress it. -- Found lmfit: /usr/include (found version "8.2.2") -- Performing Test MUPARSER_LINKS_OK -- Performing Test MUPARSER_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (muparser) does not match the name of the calling package (Muparser). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindMuparser.cmake:79 (find_package_handle_standard_args) cmake/gmxManageMuparser.cmake:74 (find_package) src/gromacs/CMakeLists.txt:396 (gmx_manage_muparser) This warning is for project developers. Use -Wno-dev to suppress it. -- Found muparser: /usr/include (found version "2.3.4") -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Configuring done (23.6s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 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/usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[2]: Leaving directory 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CMakeFiles/scanner.dir/parser.cpp.o.d -o CMakeFiles/scanner.dir/parser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/parser.cpp gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o [ 0%] Generating release version information cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake [ 0%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -MF CMakeFiles/linearalgebra.dir/eigensolver.cpp.o.d -o CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/eigensolver.cpp gmake[2]: Leaving directory 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/alltoall.cpp [ 1%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_protocol.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC 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CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_send_recv.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_send_recv.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/p2p_send_recv.cpp [ 1%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/bcast.cpp [ 1%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_wait.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/p2p_wait.cpp [ 1%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/collective.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/profile.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o cd 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src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/comm.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/event.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/gather.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o cd 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src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/scatter.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/group.cpp [ 3%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -MF CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o.d -o CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/checkpointhelper.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/tmpi_init.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-stringop-truncation -MD -MT src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o -MF CMakeFiles/linearalgebra.dir/nrjac.cpp.o.d -o CMakeFiles/linearalgebra.dir/nrjac.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/nrjac.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/list.cpp [ 3%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers 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src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o -MF CMakeFiles/modularsimulator.dir/pullelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/pullelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pullelement.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -MF CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o.d -o CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/referencetemperaturemanager.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o -MF CMakeFiles/modularsimulator.dir/signallers.cpp.o.d -o CMakeFiles/modularsimulator.dir/signallers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/signallers.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -MF CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o.d -o CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/simulatoralgorithm.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -MF CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o.d -o CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/statepropagatordata.cpp [ 8%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -MF CMakeFiles/modularsimulator.dir/topologyholder.cpp.o.d -o CMakeFiles/modularsimulator.dir/topologyholder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/topologyholder.cpp [ 9%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -MF CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/trajectoryelement.cpp [ 9%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/velocityscalingtemperaturecoupling.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 9%] Built target modularsimulator /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 9%] Generating baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/cmake -D VERSION_VARIABLES=/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/VersionInfo.cmake -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion-gen.cpp.cmakein -D VERSION_OUT=utility/baseversion-gen.cpp -D GMX_SOURCE_DOI= -D GMX_RELEASE_HASH= -D GMX_SOURCE_HASH= -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxConfigureVersionInfo.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp [ 17%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp [ 20%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp [ 22%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast 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-std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp [ 25%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include 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27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include 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/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp [ 30%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp [ 32%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp [ 33%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_prune.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/atomdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/benchmark/bench_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/freeenergydispatch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/freeenergydispatch.cpp [ 35%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/grid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_filter.cpp.o -MF CMakeFiles/libgromacs.dir/gmxana/gmx_filter.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxana/gmx_filter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/gmx_filter.cpp [ 54%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_gyrate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_nmr.cpp.o -MF CMakeFiles/libgromacs.dir/gmxana/gmx_nmr.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxana/gmx_nmr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/gmx_nmr.cpp [ 56%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_nmtraj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rotacf.cpp.o -MF CMakeFiles/libgromacs.dir/gmxana/gmx_rotacf.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxana/gmx_rotacf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/gmx_rotacf.cpp [ 58%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_rotmat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/gen_ad.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/gen_ad.cpp [ 61%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/gen_maxwell_velocities.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topdirs.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/topdirs.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/topdirs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/topdirs.cpp [ 64%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/topio.cpp.o -MF CMakeFiles/libgromacs.dir/gmxpreprocess/topio.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxpreprocess/topio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/topio.cpp [ 64%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxpreprocess/toppush.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/datamodule.cpp [ 66%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/datamodulemanager.cpp.o [ 66%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/dataproxy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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/builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/datastorage.cpp.o -MF CMakeFiles/libgromacs.dir/analysisdata/datastorage.cpp.o.d -o CMakeFiles/libgromacs.dir/analysisdata/datastorage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/datastorage.cpp [ 66%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/modules/average.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/mdlib/boxdeformation.cpp.o -MF CMakeFiles/libgromacs.dir/mdlib/boxdeformation.cpp.o.d -o CMakeFiles/libgromacs.dir/mdlib/boxdeformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/boxdeformation.cpp [ 72%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/mdlib/broadcaststructs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/electricfield.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/electricfield.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/electricfield.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/electricfield.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/awh.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/awh.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/awh/awh.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/awh/awh.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/awh.cpp [ 77%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/bias.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingparameters.cpp [ 79%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmminputgenerator.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:46: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:229:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:226:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 79%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -MF CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o.d -o CMakeFiles/libgromacs.dir/fft/gpu_3dfft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.cpp [ 83%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fft/fft_fftw3.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/device_management_common.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_management_common.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/hardwaretopology.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o -MF CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o.d -o CMakeFiles/libgromacs.dir/hardware/printhardware.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/printhardware.cpp [ 85%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/hardware/identifyavx512fmaunits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/g96io.cpp [ 90%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmx_internal_xdr.cpp [ 90%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include 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CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio.cpp [ 90%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio_xdr.cpp In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:39: In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/groio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/groio.cpp [ 90%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/libxdrf.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -Dlibgromacs_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include 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share/template/CMakeFiles/template.dir/template.cpp.o [ 95%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/share/template && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fopenmp -MD -MT share/template/CMakeFiles/template.dir/template.cpp.o -MF CMakeFiles/template.dir/template.cpp.o.d -o CMakeFiles/template.dir/template.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/share/template/template.cpp [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/box.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/box.cpp.o -MF CMakeFiles/nblib.dir/box.cpp.o.d -o CMakeFiles/nblib.dir/box.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/box.cpp [ 95%] Linking CXX executable ../../bin/gmx_d cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmx.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/gmx_objlib.dir/gmx.cpp.o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o 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/usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-c /builddir/build/BUILD/gromacs-2022.3/api/nblib/gmxcalculatorcpu.cpp [ 95%] Building CXX object api/gmxapi/CMakeFiles/gmxapi.dir/cpp/context.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/context.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/context.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/context.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/context.cpp [ 95%] Linking CXX executable ../../bin/template cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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api/gmxapi/CMakeFiles/gmxapi.dir/cpp/exceptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -Dgmxapi_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o -MF CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o.d -o CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tpr.cpp [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/molecules.cpp.o -MF CMakeFiles/nblib.dir/molecules.cpp.o.d -o CMakeFiles/nblib.dir/molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/molecules.cpp [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o -MF CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o.d -o CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/nbnxmsetuphelpers.cpp [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/particlesequencer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/particlesequencer.cpp.o -MF CMakeFiles/nblib.dir/particlesequencer.cpp.o.d -o CMakeFiles/nblib.dir/particlesequencer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/particlesequencer.cpp [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/particletype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/particletype.cpp.o -MF CMakeFiles/nblib.dir/particletype.cpp.o.d -o CMakeFiles/nblib.dir/particletype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/particletype.cpp [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/simulationstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/simulationstate.cpp.o -MF CMakeFiles/nblib.dir/simulationstate.cpp.o.d -o CMakeFiles/nblib.dir/simulationstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/simulationstate.cpp [ 95%] Building CXX object api/nblib/CMakeFiles/nblib.dir/topologyhelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/topologyhelpers.cpp.o -MF CMakeFiles/nblib.dir/topologyhelpers.cpp.o.d -o CMakeFiles/nblib.dir/topologyhelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/topologyhelpers.cpp [ 96%] Linking CXX shared library ../../lib/libgmxapi_d.so cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxapi.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmxapi_d.so.0 -o ../../lib/libgmxapi_d.so.0.3.1 CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o CMakeFiles/gmxapi.dir/cpp/context.cpp.o CMakeFiles/gmxapi.dir/cpp/exceptions.cpp.o CMakeFiles/gmxapi.dir/cpp/gmxapi.cpp.o CMakeFiles/gmxapi.dir/cpp/md.cpp.o CMakeFiles/gmxapi.dir/cpp/mdmodule.cpp.o CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o CMakeFiles/gmxapi.dir/cpp/session.cpp.o CMakeFiles/gmxapi.dir/cpp/status.cpp.o CMakeFiles/gmxapi.dir/cpp/system.cpp.o CMakeFiles/gmxapi.dir/cpp/version.cpp.o CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib: ../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 96%] Building CXX object api/nblib/CMakeFiles/nblib.dir/topology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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/builddir/build/BUILD/gromacs-2022.3/api/nblib/topology.cpp [ 96%] Building CXX object api/nblib/CMakeFiles/nblib.dir/tpr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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/builddir/build/BUILD/gromacs-2022.3/api/nblib/tpr.cpp [ 96%] Building CXX object api/nblib/CMakeFiles/nblib.dir/virials.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include 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api/nblib/CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o -MF CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o.d -o CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/calculator.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi && /usr/bin/cmake -E cmake_symlink_library ../../lib/libgmxapi_d.so.0.3.1 ../../lib/libgmxapi_d.so.0 ../../lib/libgmxapi_d.so gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 98%] Built target gmxapi [ 98%] Building CXX object api/nblib/CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o -MF CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o.d -o CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/transformations.cpp [ 98%] Building CXX object api/nblib/CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o -MF CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o.d -o CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/conversions.cpp [ 98%] Building CXX object api/nblib/CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o -MF CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o.d -o CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/convertGmxToNblib.cpp [ 98%] Building CXX object api/nblib/CMakeFiles/nblib.dir/util/setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dnblib_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/CMakeFiles/nblib.dir/util/setup.cpp.o -MF CMakeFiles/nblib.dir/util/setup.cpp.o.d -o CMakeFiles/nblib.dir/util/setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/setup.cpp [ 98%] Linking CXX shared library ../../lib/libnblib_gmx.so cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libnblib_gmx.so.0 -o ../../lib/libnblib_gmx.so.0.1.0 CMakeFiles/nblib.dir/box.cpp.o CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o CMakeFiles/nblib.dir/integrator.cpp.o CMakeFiles/nblib.dir/interactions.cpp.o CMakeFiles/nblib.dir/molecules.cpp.o CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o CMakeFiles/nblib.dir/particlesequencer.cpp.o CMakeFiles/nblib.dir/particletype.cpp.o CMakeFiles/nblib.dir/simulationstate.cpp.o CMakeFiles/nblib.dir/topologyhelpers.cpp.o CMakeFiles/nblib.dir/topology.cpp.o CMakeFiles/nblib.dir/tpr.cpp.o CMakeFiles/nblib.dir/virials.cpp.o CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o CMakeFiles/nblib.dir/util/setup.cpp.o -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib: ../../lib/libgromacs_d.so.7.0.0 /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a -lm cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib && /usr/bin/cmake -E cmake_symlink_library ../../lib/libnblib_gmx.so.0.1.0 ../../lib/libnblib_gmx.so.0 ../../lib/libnblib_gmx.so gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 98%] Built target nblib /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/depend /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples/CMakeFiles/argon-forces-integration.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples/CMakeFiles/methane-water-integration.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Building CXX object api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples && /usr/bin/g++ -DGMX_DOUBLE=1 -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fopenmp -MD -MT api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o -MF CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o.d -o CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples/argon-forces-integration.cpp [100%] Building CXX object api/nblib/samples/CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples && /usr/bin/g++ -DGMX_DOUBLE=1 -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fopenmp -MD -MT api/nblib/samples/CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o -MF CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o.d -o CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples/methane-water-integration.cpp [100%] Linking CXX executable ../../../bin/argon-forces-integration cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples && /usr/bin/cmake -E cmake_link_script CMakeFiles/argon-forces-integration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o" -o ../../../bin/argon-forces-integration -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../lib/libnblib_gmx.so.0.1.0 /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a -Wl,-rpath-link,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib [100%] Linking CXX executable ../../../bin/methane-water-integration cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples && /usr/bin/cmake -E cmake_link_script CMakeFiles/methane-water-integration.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o" -o ../../../bin/methane-water-integration -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../lib/libnblib_gmx.so.0.1.0 /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a -Wl,-rpath-link,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target argon-forces-integration gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target methane-water-integration gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles 0 + popd ~/build/BUILD/gromacs-2022.3 + test -n '' + for mpi in '' mpich openmpi + test -n mpich + module load mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + mkdir -p mpich_d + pushd mpich_d ~/build/BUILD/gromacs-2022.3/mpich_d ~/build/BUILD/gromacs-2022.3 + test -z mpich + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ test -n mpich ++ echo -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_mpich_d -DGMX_LIBS_SUFFIX=_mpich_d -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib ++ test -z mpich ++ test -n _d ++ echo -DGMX_DOUBLE:BOOL=ON + /usr/bin/cmake -S .. -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DCMAKE_SKIP_INSTALL_RPATH=ON -DGMX_BLAS_USER=flexiblas -DGMX_BUILD_UNITTESTS:BOOL=ON -DGMX_USE_LMFIT=EXTERNAL -DGMX_EXTERNAL_TNG:BOOL=ON -DGMX_EXTERNAL_TINYXML2:BOOL=OFF -DGMX_USE_MUPARSER=EXTERNAL -DGMX_LAPACK_USER=flexiblas -DGMX_USE_RDTSCP=OFF -DGMX_INSTALL_LEGACY_API=ON -DGMX_DSSP_PROGRAM_PATH=/usr/bin/dssp -DGMX_VERSION_STRING_OF_FORK=Fedora39 -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_mpich_d -DGMX_LIBS_SUFFIX=_mpich_d -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DGMX_DOUBLE:BOOL=ON -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Python3_LIBRARIES Development Development.Module Development.Embed) (found suitable version "3.12.0", minimum required is "3.7") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Looking for fedisableexcept in m -- Looking for fedisableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Found MPI_CXX: /usr/lib64/mpich/lib/libmpicxx.so (found version "4.0") -- Found MPI: TRUE (found version "4.0") found components: CXX -- Using manually set binary suffix: "_mpich_d" -- Using manually set library suffix: "_mpich_d" -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Performing Test TEST_ATOMICS -- Performing Test TEST_ATOMICS - Success -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 1 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd sve -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Checking for system XDR support -- Checking for system XDR support - not present -- Checking for module 'fftw3' -- Found fftw3, version 3.3.10 -- Looking for fftw_plan_many_dft in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft in /usr/lib64/libfftw3.so - found -- Looking for fftw_plan_many_dft_r2c in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft_r2c in /usr/lib64/libfftw3.so - found -- Looking for fftw_plan_many_dft_c2r in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft_c2r in /usr/lib64/libfftw3.so - found -- Looking for fftw_have_simd_sse in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_sse in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_sse in /usr/lib64/libfftw3.so -- Looking for fftw_have_sse in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_sse2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_sse2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_sse2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_sse2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx2_128 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx2_128 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx512 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx512 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx_128_fma in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx_128_fma in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx_512 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx_512 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_kcvi in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_kcvi in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_neon in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_neon in /usr/lib64/libfftw3.so - found -- Using external FFT library - FFTW3 -- Checking that user BLAS library flexiblas works -- Looking for dgemm_ -- Looking for dgemm_ - found -- Checking that user LAPACK library flexiblas works -- Looking for cheev_ -- Looking for cheev_ - found -- Could not convert sample image, ImageMagick convert can not be used. A possible way to fix it can be found here: https://alexvanderbist.com/2018/fixing-imagick-error-unauthorized -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE pygments) (Required is at least version "1.6.1") CMake Deprecation Warning at src/external/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Performing Test HAVE_NO_DEPRECATED_COPY -- Performing Test HAVE_NO_DEPRECATED_COPY - Success -- Performing Test HAS_WARNING_EVERYTHING -- Performing Test HAS_WARNING_EVERYTHING - Failed -- Performing Test HAS_NO_STRINGOP_TRUNCATION -- Performing Test HAS_NO_STRINGOP_TRUNCATION - Success -- Performing Test HAS_NO_REDUNDANT_MOVE -- Performing Test HAS_NO_REDUNDANT_MOVE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Performing Test HAS_NO_UNUSED_PARAMETER -- Performing Test HAS_NO_UNUSED_PARAMETER - Success -- Performing Test HAS_NO_MISSING_DECLARATIONS -- Performing Test HAS_NO_MISSING_DECLARATIONS - Success -- Performing Test HAS_NO_NULL_CONVERSIONS -- Performing Test HAS_NO_NULL_CONVERSIONS - Success -- Performing Test LMFIT_LINKS_OK -- Performing Test LMFIT_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (lmfit) does not match the name of the calling package (Lmfit). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindLmfit.cmake:83 (find_package_handle_standard_args) cmake/gmxManageLmfit.cmake:76 (find_package) src/gromacs/CMakeLists.txt:394 (gmx_manage_lmfit) This warning is for project developers. Use -Wno-dev to suppress it. -- Found lmfit: /usr/include (found version "8.2.2") -- Performing Test MUPARSER_LINKS_OK -- Performing Test MUPARSER_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (muparser) does not match the name of the calling package (Muparser). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindMuparser.cmake:79 (find_package_handle_standard_args) cmake/gmxManageMuparser.cmake:74 (find_package) src/gromacs/CMakeLists.txt:396 (gmx_manage_muparser) This warning is for project developers. Use -Wno-dev to suppress it. -- Found muparser: /usr/include (found version "2.3.4") -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Configuring done (22.2s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 0%] Generating release version information [ 0%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/andersentemperaturecoupling.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/errhandler.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 0%] Built target release-version-info /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build 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src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -MF CMakeFiles/linearalgebra.dir/eigensolver.cpp.o.d -o CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/eigensolver.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/lock.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -isystem 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src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 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src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o -MF CMakeFiles/linearalgebra.dir/nrjac.cpp.o.d -o CMakeFiles/linearalgebra.dir/nrjac.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/nrjac.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 0%] Built target mdrun_objlib /usr/bin/gmake -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs 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src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o -MF CMakeFiles/modularsimulator.dir/pullelement.cpp.o.d -o CMakeFiles/modularsimulator.dir/pullelement.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/pullelement.cpp [ 3%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include 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src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -MF CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o.d -o CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/referencetemperaturemanager.cpp [ 3%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion-gen.cpp.cmakein -D VERSION_OUT=utility/baseversion-gen.cpp -D GMX_SOURCE_DOI= -D GMX_RELEASE_HASH= -D GMX_SOURCE_HASH= -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxConfigureVersionInfo.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/basenetwork.cpp.o [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/any.cpp.o [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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CMakeFiles/libgromacs.dir/utility/basenetwork.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/basenetwork.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -MF CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include 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src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -MF CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o.d -o CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/keyvaluetree.cpp [ 6%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreemdpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp [ 9%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs 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/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 9%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o cd 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp.o cd 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp [ 14%] Building CXX object 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp [ 14%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp.o cd 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-pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp [ 19%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_prune.cpp.o cd 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp [ 26%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp [ 27%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidegpuusage.cpp [ 44%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o -MF CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o.d -o CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/decidesimulationworkload.cpp [ 44%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include 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src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_dipoles.cpp.o -MF CMakeFiles/libgromacs.dir/gmxana/gmx_dipoles.cpp.o.d -o CMakeFiles/libgromacs.dir/gmxana/gmx_dipoles.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/gmx_dipoles.cpp [ 52%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/gmxana/gmx_disre.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingamplitudelookup.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingamplitudelookup.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingamplitudelookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingamplitudelookup.cpp [ 78%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingforceprovider.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingforceprovider.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp [ 78%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingoptions.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:46: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:229:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:226:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingoutputprovider.cpp.o [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingoutputprovider.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include 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src/gromacs/CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/g96io.cpp [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio.cpp In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:39: In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio_xdr.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/groio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/groio.cpp [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/libxdrf.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include 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modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o selection/CMakeFiles/scanner.dir/parser.cpp.o selection/CMakeFiles/scanner.dir/scanner.cpp.o /usr/bin/ranlib ../../lib/libgromacs_mpich_d.a gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 98%] Built target libgromacs /usr/bin/gmake -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/depend /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/share/template /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/share/template /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/share/template/CMakeFiles/template.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Linking CXX executable ../../bin/gmx_mpich_d cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmx.dir/link.txt --verbose=1 [100%] Building CXX object share/template/CMakeFiles/template.dir/template.cpp.o /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/gmx_objlib.dir/gmx.cpp.o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o CMakeFiles/view_objlib.dir/view/view.cpp.o -o ../../bin/gmx_mpich_d -Wl,-rpath,/usr/lib64/mpich/lib: ../../lib/libgromacs_mpich_d.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/share/template && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fopenmp -MD -MT share/template/CMakeFiles/template.dir/template.cpp.o -MF CMakeFiles/template.dir/template.cpp.o.d -o CMakeFiles/template.dir/template.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/share/template/template.cpp [100%] Linking CXX executable ../../bin/template cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/template.dir/template.cpp.o -o ../../bin/template -Wl,-rpath,/usr/lib64/mpich/lib ../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Built target template /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Built target gmx gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles 0 + popd ~/build/BUILD/gromacs-2022.3 + test -n mpich + module unload mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for mpi in '' mpich openmpi + test -n openmpi + module load mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + mkdir -p openmpi_d + pushd openmpi_d ~/build/BUILD/gromacs-2022.3/openmpi_d ~/build/BUILD/gromacs-2022.3 + test -z openmpi + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ test -n openmpi ++ echo -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_openmpi_d -DGMX_LIBS_SUFFIX=_openmpi_d -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib ++ test -z openmpi ++ test -n _d ++ echo -DGMX_DOUBLE:BOOL=ON + /usr/bin/cmake -S .. -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DCMAKE_SKIP_INSTALL_RPATH=ON -DGMX_BLAS_USER=flexiblas -DGMX_BUILD_UNITTESTS:BOOL=ON -DGMX_USE_LMFIT=EXTERNAL -DGMX_EXTERNAL_TNG:BOOL=ON -DGMX_EXTERNAL_TINYXML2:BOOL=OFF -DGMX_USE_MUPARSER=EXTERNAL -DGMX_LAPACK_USER=flexiblas -DGMX_USE_RDTSCP=OFF -DGMX_INSTALL_LEGACY_API=ON -DGMX_DSSP_PROGRAM_PATH=/usr/bin/dssp -DGMX_VERSION_STRING_OF_FORK=Fedora39 -DGMX_SIMD=ARM_NEON_ASIMD -DGMX_MPI:BOOL=ON -DGMX_THREAD_MPI:BOOL=OFF -DGMX_DEFAULT_SUFFIX:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=OFF -DGMX_BINARY_SUFFIX=_openmpi_d -DGMX_LIBS_SUFFIX=_openmpi_d -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DGMX_DOUBLE:BOOL=ON -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Python3_LIBRARIES Development Development.Module Development.Embed) (found suitable version "3.12.0", minimum required is "3.7") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CFLAGS_EXCESS_PREC -- Performing Test CFLAGS_EXCESS_PREC - Success -- Performing Test CFLAGS_COPT -- Performing Test CFLAGS_COPT - Success -- Performing Test CFLAGS_NOINLINE -- Performing Test CFLAGS_NOINLINE - Success -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS -- Performing Test CXXFLAGS_WARN_NO_MISSING_FIELD_INITIALIZERS - Success -- Performing Test CXXFLAGS_EXCESS_PREC -- Performing Test CXXFLAGS_EXCESS_PREC - Success -- Performing Test CXXFLAGS_COPT -- Performing Test CXXFLAGS_COPT - Success -- Performing Test CXXFLAGS_NOINLINE -- Performing Test CXXFLAGS_NOINLINE - Success -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file time.h -- Looking for include file time.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file io.h -- Looking for include file io.h - not found -- Looking for include file sched.h -- Looking for include file sched.h - found -- Looking for include file xmmintrin.h -- Looking for include file xmmintrin.h - not found -- Looking for gettimeofday -- Looking for gettimeofday - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for nice -- Looking for nice - found -- Looking for fsync -- Looking for fsync - found -- Looking for _fileno -- Looking for _fileno - not found -- Looking for fileno -- Looking for fileno - found -- Looking for _commit -- Looking for _commit - not found -- Looking for sigaction -- Looking for sigaction - found -- Performing Test HAVE_BUILTIN_CLZ -- Performing Test HAVE_BUILTIN_CLZ - Success -- Performing Test HAVE_BUILTIN_CLZLL -- Performing Test HAVE_BUILTIN_CLZLL - Success -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for feenableexcept in m -- Looking for feenableexcept in m - found -- Looking for fedisableexcept in m -- Looking for fedisableexcept in m - found -- Checking for sched.h GNU affinity API -- Performing Test sched_affinity_compile -- Performing Test sched_affinity_compile - Success -- Looking for include file mm_malloc.h -- Looking for include file mm_malloc.h - not found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Checking for _mm_malloc() -- Checking for _mm_malloc() - not supported -- Looking for posix_memalign -- Looking for posix_memalign - found -- Looking for memalign -- Looking for memalign - not found -- Found MPI_CXX: /usr/lib64/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") found components: CXX -- GROMACS library will use OpenMPI 4.1.5 -- Using manually set binary suffix: "_openmpi_d" -- Using manually set library suffix: "_openmpi_d" -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for C++ include pthread.h -- Looking for C++ include pthread.h - found -- Performing Test TEST_ATOMICS -- Performing Test TEST_ATOMICS - Success -- Atomic operations found -- Performing Test PTHREAD_SETAFFINITY -- Performing Test PTHREAD_SETAFFINITY - Success -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test C_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS -- Performing Test CXX_COMPILE_WORKS_WITHOUT_SPECIAL_FLAGS - Success -- Enabling ARM (AArch64) NEON Advanced SIMD instructions using CXX flags: -- Performing Test _callconv___vectorcall -- Performing Test _callconv___vectorcall - Failed -- Performing Test _callconv___regcall -- Performing Test _callconv___regcall - Failed -- Performing Test _callconv_ -- Performing Test _callconv_ - Success -- Checking for GCC x86 inline asm -- Checking for GCC x86 inline asm - not supported -- Detected build CPU vendor - ARM -- Detected build CPU brand - Unknown CPU brand -- Detected build CPU family - 8 -- Detected build CPU model - 1 -- Detected build CPU stepping - 1 -- Detected build CPU features - neon neon_asimd sve -- Checking for 64-bit off_t -- Checking for 64-bit off_t - present -- Checking for fseeko/ftello -- Checking for fseeko/ftello - present -- Checking for SIGUSR1 -- Checking for SIGUSR1 - found -- Checking for pipe support -- Checking for system XDR support -- Checking for system XDR support - not present -- Checking for module 'fftw3' -- Found fftw3, version 3.3.10 -- Looking for fftw_plan_many_dft in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft in /usr/lib64/libfftw3.so - found -- Looking for fftw_plan_many_dft_r2c in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft_r2c in /usr/lib64/libfftw3.so - found -- Looking for fftw_plan_many_dft_c2r in /usr/lib64/libfftw3.so -- Looking for fftw_plan_many_dft_c2r in /usr/lib64/libfftw3.so - found -- Looking for fftw_have_simd_sse in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_sse in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_sse in /usr/lib64/libfftw3.so -- Looking for fftw_have_sse in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_sse2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_sse2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_sse2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_sse2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx2 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx2 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx2_128 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx2_128 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx512 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx512 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx_128_fma in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx_128_fma in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_avx_512 in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_avx_512 in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_kcvi in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_kcvi in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_altivec in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_altivec in /usr/lib64/libfftw3.so - not found -- Looking for fftw_have_simd_neon in /usr/lib64/libfftw3.so -- Looking for fftw_have_simd_neon in /usr/lib64/libfftw3.so - found -- Using external FFT library - FFTW3 -- Checking that user BLAS library flexiblas works -- Looking for dgemm_ -- Looking for dgemm_ - found -- Checking that user LAPACK library flexiblas works -- Looking for cheev_ -- Looking for cheev_ - found -- Could not convert sample image, ImageMagick convert can not be used. A possible way to fix it can be found here: https://alexvanderbist.com/2018/fixing-imagick-error-unauthorized -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE pygments) (Required is at least version "1.6.1") CMake Deprecation Warning at src/external/googletest/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at src/external/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter -- Performing Test HAVE_NO_DEPRECATED_COPY -- Performing Test HAVE_NO_DEPRECATED_COPY - Success -- Performing Test HAS_WARNING_EVERYTHING -- Performing Test HAS_WARNING_EVERYTHING - Failed -- Performing Test HAS_NO_STRINGOP_TRUNCATION -- Performing Test HAS_NO_STRINGOP_TRUNCATION - Success -- Performing Test HAS_NO_REDUNDANT_MOVE -- Performing Test HAS_NO_REDUNDANT_MOVE - Success -- Performing Test HAS_NO_UNUSED -- Performing Test HAS_NO_UNUSED - Success -- Performing Test HAS_NO_UNUSED_PARAMETER -- Performing Test HAS_NO_UNUSED_PARAMETER - Success -- Performing Test HAS_NO_MISSING_DECLARATIONS -- Performing Test HAS_NO_MISSING_DECLARATIONS - Success -- Performing Test HAS_NO_NULL_CONVERSIONS -- Performing Test HAS_NO_NULL_CONVERSIONS - Success -- Performing Test LMFIT_LINKS_OK -- Performing Test LMFIT_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (lmfit) does not match the name of the calling package (Lmfit). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindLmfit.cmake:83 (find_package_handle_standard_args) cmake/gmxManageLmfit.cmake:76 (find_package) src/gromacs/CMakeLists.txt:394 (gmx_manage_lmfit) This warning is for project developers. Use -Wno-dev to suppress it. -- Found lmfit: /usr/include (found version "8.2.2") -- Performing Test MUPARSER_LINKS_OK -- Performing Test MUPARSER_LINKS_OK - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (muparser) does not match the name of the calling package (Muparser). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindMuparser.cmake:79 (find_package_handle_standard_args) cmake/gmxManageMuparser.cmake:74 (find_package) src/gromacs/CMakeLists.txt:396 (gmx_manage_muparser) This warning is for project developers. Use -Wno-dev to suppress it. -- Found muparser: /usr/include (found version "2.3.4") -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Configuring done (27.5s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 0%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fopenmp -Wno-redundant-move -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -MF CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d -o CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/andersentemperaturecoupling.cpp [ 0%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o [ 0%] Generating release version information cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -MF CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/src/errhandler.cpp cd /builddir/build/BUILD/gromacs-2022.3 && /usr/bin/cmake -D PYTHON_EXECUTABLE=/usr/bin/python3.12 -D PROJECT_VERSION=2022.3-Fedora39 -D PROJECT_SOURCE_DIR=/builddir/build/BUILD/gromacs-2022.3 -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake [ 0%] Building CXX object src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -Wno-unused -Wno-unused-parameter -Wno-missing-declarations -Wno-null-conversion -MD -MT src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o -MF CMakeFiles/scanner.dir/parser.cpp.o.d -o CMakeFiles/scanner.dir/parser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/parser.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 0%] Built target release-version-info /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/linearalgebra && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/baseversion-gen.cpp.cmakein -D VERSION_OUT=utility/baseversion-gen.cpp -D GMX_SOURCE_DOI= -D GMX_RELEASE_HASH= -D GMX_SOURCE_HASH= -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxConfigureVersionInfo.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/cmake -E touch utility/baseversion-gen.cpp cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/alignedallocator.cpp.o [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/any.cpp.o [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/basenetwork.cpp.o [ 3%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp [ 11%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp [ 13%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp [ 16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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16%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp [ 24%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -MF CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o.d -o CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp [ 29%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfittingparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingparameters.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmminputgenerator.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:46: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:229:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28, inlined from 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/densityfittingforceprovider.cpp:226:48: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In member function 'gmx::DensityFittingForceProvider::Impl::Impl(gmx::DensityFittingParameters const&, gmx::basic_mdspan, gmx::layout_right, gmx::accessor_basic >, gmx::TranslateAndScale const&, gmx::LocalAtomSet const&, PbcType, double, gmx::DensityFittingForceProviderState const&)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o -MF CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o.d -o CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/qmmm.cpp [ 80%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/qmmm/qmmmforceprovider_stub.cpp.o cd 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio.cpp In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:39: In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullCoordEntry>(XDR*, StatePullCoordEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullGroupEntry>(XDR*, StatePullGroupEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/gmxfio_xdr.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrun/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mimic/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/groio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/groio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/groio.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, double**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StatePullEntry>(XDR*, StatePullEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateKineticEntry>(XDR*, StateKineticEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/essentialdynamics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/imd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/statistics/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/swap/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectory/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/libxdrf.cpp In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEnergyEntry>(XDR*, StateEnergyEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateEntry>(XDR*, StateEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function 'std::vector >::resize(unsigned long)', inlined from 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/checkpoint.cpp:828:31: /usr/include/c++/13/bits/stl_vector.h:1013:28: warning: 'this' pointer is null [-Wnonnull] 1013 | _M_default_append(__new_size - size()); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'doVectorLow, StateFepEntry>(XDR*, StateFepEntry, int, int, int*, int**, std::vector >*, _IO_FILE*, CptElementType)int [clone .constprop.0]': /usr/include/c++/13/bits/vector.tcc:634:5: note: in a call to non-static member function 'std::vector >::_M_default_append(unsigned long)' 634 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include 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src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -MF CMakeFiles/libgromacs.dir/fileio/matio.cpp.o.d -o CMakeFiles/libgromacs.dir/fileio/matio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/matio.cpp [ 91%] Building CXX object src/gromacs/CMakeFiles/libgromacs.dir/fileio/md5.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs && /usr/bin/g++ -DGMX_DOUBLE=1 -DHAVE_CONFIG_H -DTMPI_EXPORTS -DTMPI_USE_VISIBILITY -DUSE_STD_INTTYPES_H -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/mttk.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/signallers.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/trajectoryelement.cpp.o modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o selection/CMakeFiles/scanner.dir/parser.cpp.o selection/CMakeFiles/scanner.dir/scanner.cpp.o /usr/bin/ranlib ../../lib/libgromacs_openmpi_d.a gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Built target libgromacs /usr/bin/gmake -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/depend /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/share/template /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/share/template /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/share/template/CMakeFiles/template.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Linking CXX executable ../../bin/gmx_openmpi_d cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmx.dir/link.txt --verbose=1 gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f share/template/CMakeFiles/template.dir/build.make share/template/CMakeFiles/template.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/gmx_objlib.dir/gmx.cpp.o CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o CMakeFiles/view_objlib.dir/view/view.cpp.o -o ../../bin/gmx_openmpi_d -Wl,-rpath,/usr/lib64/openmpi/lib: ../../lib/libgromacs_openmpi_d.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so [100%] Building CXX object share/template/CMakeFiles/template.dir/template.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/share/template && /usr/bin/g++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fopenmp -MD -MT share/template/CMakeFiles/template.dir/template.cpp.o -MF CMakeFiles/template.dir/template.cpp.o.d -o CMakeFiles/template.dir/template.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/share/template/template.cpp [100%] Linking CXX executable ../../bin/template cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/template.dir/template.cpp.o -o ../../bin/template -Wl,-rpath,/usr/lib64/openmpi/lib ../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Built target template /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Built target gmx gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles 0 + popd ~/build/BUILD/gromacs-2022.3 + test -n openmpi + module unload mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.7MWSfY + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 ++ dirname /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd gromacs-2022.3 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec READLINK_CMD /usr/bin/readlink readlink ++ Nm=READLINK_CMD ++ confPath=/usr/bin/readlink ++ execNm=readlink ++ eval READLINK_CMD=/usr/bin/readlink +++ READLINK_CMD=/usr/bin/readlink ++ '[' '!' -x /usr/bin/readlink ']' ++ unset Nm confPath execNm ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec ++ '[' -f /proc/39732/exe ']' +++ /usr/bin/readlink /proc/39732/exe ++ my_shell=/usr/bin/bash +++ /usr/bin/expr /usr/bin/bash : '-*\(.*\)' ++ my_shell=/usr/bin/bash +++ /usr/bin/basename /usr/bin/bash ++ my_shell=bash ++ case ${my_shell} in ++ '[' -f /usr/share/lmod/lmod/init/bash ']' ++ . /usr/share/lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/share/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx ~/build/BUILD/gromacs-2022.3/serial ~/build/BUILD/gromacs-2022.3 ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE READLINK_CMD + for p in '' _d + for mpi in '' mpich openmpi + test -n '' + pushd serial + DESTDIR=/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/COPYING -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdrun.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjconv.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-freevolume.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-msd.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-density.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-enemat.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-extract-cluster.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-gyrate.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmens.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-angle.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-cluster.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-filter.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdmat.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-helix.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-eneconv.1 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-chi.1 -- Installing: 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Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/abstractdata.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/analysisdata.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/arraydata.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/dataframe.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/datamodule.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/average.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/displacement.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/histogram.h -- Installing: 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/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionbehavior.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoption.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionmanager.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/libgromacs.so.7.0.0 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/libgromacs.so.7 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/libgromacs.so -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/pkgconfig/libgromacs.pc -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs/libgromacs.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs/libgromacs-release.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs/gromacs-config.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs/gromacs-config-version.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs/gromacs-hints.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/gpu_utils/device_utils.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/gpu_utils/vectype_ops.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/pbcutil/ishift.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_consts.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_pruneonly.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_utils.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.cl -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen_add_twincut.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gather.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gpu_calculate_splines.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gpu_types.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_program.cl -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_solve.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_spread.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx -- Set runtime path of "/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx" to "" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx-completion.bash -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx-completion-gmx.bash + popd ~/build/BUILD/gromacs-2022.3 + test -n '' + for mpi in '' mpich openmpi + test -n mpich + module load mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 ~/build/BUILD/gromacs-2022.3/mpich ~/build/BUILD/gromacs-2022.3 + pushd mpich + DESTDIR=/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "Release" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/COPYING -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdrun.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-freevolume.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-msd.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-density.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-enemat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-extract-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-gyrate.1 -- Up-to-date: 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Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/indexutil.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/nbsearch.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/position.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectioncollection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionenums.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionmanager.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/gpu_utils/device_utils.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/gpu_utils/vectype_ops.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/pbcutil/ishift.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_consts.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_pruneonly.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_utils.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.cl -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen_add_twincut.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gather.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gpu_calculate_splines.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gpu_types.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_program.cl -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_solve.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_spread.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx_mpich -- Set runtime path of "/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx_mpich" to "" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx-completion.bash -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx-completion-gmx_mpich.bash + popd ~/build/BUILD/gromacs-2022.3 + test -n mpich + module unload mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for mpi in '' mpich openmpi + test -n openmpi + module load mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + pushd openmpi ~/build/BUILD/gromacs-2022.3/openmpi ~/build/BUILD/gromacs-2022.3 + DESTDIR=/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "Release" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/COPYING -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdrun.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-freevolume.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-msd.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-density.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-enemat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-extract-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-gyrate.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmens.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-angle.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-filter.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdmat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-helix.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-eneconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-chi.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-help.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-make_ndx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-xpm2ps.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sham.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-covar.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rmsdist.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mk_angndx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-select.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nonbonded-benchmark.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dipoles.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dyecoupl.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dielectric.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-analyze.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-genrestr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sorient.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pme_error.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-potential.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-tcaf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-make_edi.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-convert-trj.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-traj.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pairdist.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-insert-molecules.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-view.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-vanhove.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-densmap.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-bar.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-convert-tpr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-lie.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-report-methods.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-grompp.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-order.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pdb2gmx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-anaeig.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-principal.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-awh.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-check.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rdf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rotmat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-h2order.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-x2top.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-velacc.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-saxs.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-spatial.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rmsf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-saltbr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-helixorient.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-spol.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-genion.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dump.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmtraj.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trajectory.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-bundle.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sans.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-clustsize.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-gangle.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-editconf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rama.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-tune_pme.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-disre.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rms.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-hbond.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjcat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-genconf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-solvate.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mindist.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-densorder.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-hydorder.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-wheel.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-current.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-do_dssp.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-polystat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dos.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sigeps.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-wham.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjorder.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-distance.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-energy.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-confrms.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmeig.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rotacf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sasa.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/template/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/template/README -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/template/template.cpp -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/template/Makefile.pkg -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/template/cmake/FindGROMACS.cmake -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/README.tutor -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/README_FreeEnergyModifications.txt -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/top -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/top/gromos45a3.ff -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/top/gromos45a3.ff/watermodels.dat -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/top/gromos45a3.ff/aminoacids.n.tdb -- Up-to-date: 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/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/timeunitmanager.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/pbcutil/pbc.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/atomprop.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/atoms.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/block.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/forcefieldparameters.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/idef.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/ifunc.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/index.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/symtab.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/topology.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectory/trajectoryframe.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/abstractdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/analysisdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/arraydata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/dataframe.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/datamodule.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/average.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/displacement.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/histogram.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/lifetime.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/plot.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/analysismodule.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/analysissettings.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/cmdlinerunner.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/topologyinformation.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/indexutil.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/nbsearch.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/position.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectioncollection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionenums.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionmanager.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/gpu_utils/device_utils.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/gpu_utils/vectype_ops.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/pbcutil/ishift.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_consts.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_pruneonly.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_utils.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.cl -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen_add_twincut.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gather.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gpu_calculate_splines.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_gpu_types.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_program.cl -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_solve.clh -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/opencl/gromacs/ewald/pme_spread.clh -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx_openmpi -- Set runtime path of "/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx_openmpi" to "" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx-completion.bash -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx-completion-gmx_openmpi.bash + popd ~/build/BUILD/gromacs-2022.3 + test -n openmpi + module unload mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for p in '' _d + for mpi in '' mpich openmpi ~/build/BUILD/gromacs-2022.3/serial_d ~/build/BUILD/gromacs-2022.3 + test -n '' + pushd serial_d + DESTDIR=/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "Release" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/COPYING -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdrun.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-freevolume.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-msd.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-density.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-enemat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-extract-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-gyrate.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmens.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-angle.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-filter.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdmat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-helix.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-eneconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-chi.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-help.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-make_ndx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-xpm2ps.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sham.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-covar.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rmsdist.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mk_angndx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-select.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nonbonded-benchmark.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dipoles.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dyecoupl.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dielectric.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-analyze.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-genrestr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sorient.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pme_error.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-potential.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-tcaf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-make_edi.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-convert-trj.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-traj.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pairdist.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-insert-molecules.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-view.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-vanhove.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-densmap.1 -- Up-to-date: 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Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/mdtypes/inputrec.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/mdtypes/md_enums.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/abstractoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/basicoptions.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/filenameoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/filenameoptionmanager.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionsbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionscontainer.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionscontainerwithsections.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ivaluestore.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/optionfiletype.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/optionflags.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/options.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/timeunitmanager.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/pbcutil/pbc.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/atomprop.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/atoms.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/block.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/forcefieldparameters.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/idef.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/ifunc.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/index.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/symtab.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/topology.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectory/trajectoryframe.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/abstractdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/analysisdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/arraydata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/dataframe.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/datamodule.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/average.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/displacement.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/histogram.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/lifetime.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/modules/plot.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/analysismodule.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/analysissettings.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/cmdlinerunner.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/topologyinformation.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/indexutil.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/nbsearch.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/position.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectioncollection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionenums.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionmanager.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/libgromacs_d.so.7.0.0 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/libgromacs_d.so.7 -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/libgromacs_d.so -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/pkgconfig/libgromacs_d.pc -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs_d/libgromacs.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs_d/libgromacs-release.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs_d/gromacs_d-config.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs_d/gromacs_d-config-version.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/cmake/gromacs_d/gromacs-hints_d.cmake -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx_d -- Set runtime path of "/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx_d" to "" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx-completion.bash -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/bin/gmx-completion-gmx_d.bash + popd ~/build/BUILD/gromacs-2022.3 + test -n '' + for mpi in '' mpich openmpi + test -n mpich + module load mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + pushd mpich_d ~/build/BUILD/gromacs-2022.3/mpich_d ~/build/BUILD/gromacs-2022.3 + DESTDIR=/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "Release" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/COPYING -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdrun.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-freevolume.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-msd.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-density.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-enemat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-extract-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-gyrate.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmens.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-angle.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-filter.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdmat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-helix.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-eneconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-chi.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-help.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-make_ndx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-xpm2ps.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sham.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-covar.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rmsdist.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mk_angndx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-select.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nonbonded-benchmark.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dipoles.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dyecoupl.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-dielectric.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-analyze.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-genrestr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-sorient.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pme_error.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-potential.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-tcaf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-make_edi.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-convert-trj.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-traj.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pairdist.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-insert-molecules.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-view.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-vanhove.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-densmap.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-bar.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-convert-tpr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-lie.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-report-methods.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-grompp.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-order.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-pdb2gmx.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmr.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-anaeig.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-principal.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-awh.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-check.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rdf.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-rotmat.1 -- Up-to-date: 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Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/math -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/math/vec.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/math/utilities.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/math/do_fit.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/math/vectypes.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/math/units.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/math/functions.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/version.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/libgromacs_export.h -- Up-to-date: 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Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/abstractoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/basicoptions.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/filenameoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/filenameoptionmanager.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionsbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionscontainer.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionscontainerwithsections.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ivaluestore.h -- Up-to-date: 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Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/idef.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/ifunc.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/index.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/symtab.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/topology.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectory/trajectoryframe.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/abstractdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/analysisdata.h -- Up-to-date: 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/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/analysismodule.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/analysissettings.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/cmdlinerunner.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis/topologyinformation.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectoryanalysis.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/indexutil.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/nbsearch.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/position.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectioncollection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionenums.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionmanager.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx_mpich_d -- Set runtime path of "/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx_mpich_d" to "" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx-completion.bash -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/mpich/bin/gmx-completion-gmx_mpich_d.bash + popd ~/build/BUILD/gromacs-2022.3 + test -n mpich + module unload mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for mpi in '' mpich openmpi + test -n openmpi + module load mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + pushd openmpi_d ~/build/BUILD/gromacs-2022.3/openmpi_d ~/build/BUILD/gromacs-2022.3 + DESTDIR=/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "Release" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/gromacs/COPYING -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-mdrun.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-trjconv.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-freevolume.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-msd.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-density.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-enemat.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-extract-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-gyrate.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-nmens.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-angle.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-cluster.1 -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/man/man1/gmx-filter.1 -- Up-to-date: 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Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/abstractoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/basicoptions.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/filenameoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/filenameoptionmanager.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionsbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionscontainer.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ioptionscontainerwithsections.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/options/ivaluestore.h -- Up-to-date: 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Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/idef.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/ifunc.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/index.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/symtab.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/topology/topology.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/trajectory/trajectoryframe.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/abstractdata.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/analysisdata/analysisdata.h -- Up-to-date: 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/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/indexutil.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/nbsearch.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/position.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectioncollection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionenums.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selection.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionbehavior.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoption.h -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/include/gromacs/selection/selectionoptionmanager.h -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx_openmpi_d -- Set runtime path of "/builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx_openmpi_d" to "" -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin -- Up-to-date: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx-completion.bash -- Installing: /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/lib64/openmpi/bin/gmx-completion-gmx_openmpi_d.bash + popd ~/build/BUILD/gromacs-2022.3 + test -n openmpi + module unload mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + mkdir -p /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/doc/gromacs + install -pm 644 AUTHORS COPYING README /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/doc/gromacs + install -cpm 644 serial/docs/manual/gromacs.pdf /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/doc/gromacs/manual.pdf + install -cpm 644 /builddir/build/SOURCES/gromacs-README.fedora /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64/usr/share/doc/gromacs/README.fedora + pushd /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 ~/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 ~/build/BUILD/gromacs-2022.3 + rm .//usr/bin/GMXRC .//usr/bin/GMXRC.bash .//usr/bin/GMXRC.csh .//usr/bin/GMXRC.zsh + rm .//usr/lib64/mpich/bin/GMXRC .//usr/lib64/mpich/bin/GMXRC.bash .//usr/lib64/mpich/bin/GMXRC.csh .//usr/lib64/mpich/bin/GMXRC.zsh .//usr/lib64/openmpi/bin/GMXRC .//usr/lib64/openmpi/bin/GMXRC.bash .//usr/lib64/openmpi/bin/GMXRC.csh .//usr/lib64/openmpi/bin/GMXRC.zsh .//usr/lib64/mpich/bin/demux.pl .//usr/lib64/mpich/bin/xplor2gmx.pl .//usr/lib64/openmpi/bin/demux.pl .//usr/lib64/openmpi/bin/xplor2gmx.pl + for bin in demux.pl xplor2gmx.pl + mv .//usr/bin/demux.pl .//usr/bin/g_demux.pl + for bin in demux.pl xplor2gmx.pl + mv .//usr/bin/xplor2gmx.pl .//usr/bin/g_xplor2gmx.pl + mkdir -p .//usr/share/bash-completion/completions + for bin in gmx{,_d} + cat .//usr/bin/gmx-completion.bash .//usr/bin/gmx-completion-gmx.bash + rm .//usr/bin/gmx-completion-gmx.bash + for bin in gmx{,_d} + cat .//usr/bin/gmx-completion.bash .//usr/bin/gmx-completion-gmx_d.bash + rm .//usr/bin/gmx-completion-gmx_d.bash + rm .//usr/bin/gmx-completion.bash .//usr/lib64/mpich/bin/gmx-completion-gmx_mpich.bash .//usr/lib64/mpich/bin/gmx-completion-gmx_mpich_d.bash .//usr/lib64/mpich/bin/gmx-completion.bash .//usr/lib64/openmpi/bin/gmx-completion-gmx_openmpi.bash .//usr/lib64/openmpi/bin/gmx-completion-gmx_openmpi_d.bash .//usr/lib64/openmpi/bin/gmx-completion.bash + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2022.3-4.fc39 --unique-debug-suffix -2022.3-4.fc39.aarch64 --unique-debug-src-base gromacs-2022.3-4.fc39.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/gromacs-2022.3 find-debuginfo: starting Extracting debug info from 11 files DWARF-compressing 11 files sepdebugcrcfix: Updated 11 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/gromacs-2022.3-4.fc39.aarch64 cpio: mpich/redhat-linux-build/src/gromacs/parser.h: Cannot stat: No such file or directory cpio: mpich/redhat-linux-build/src/gromacs/parser.y: Cannot stat: No such file or directory cpio: mpich/redhat-linux-build/src/gromacs/scanner_flex.h: Cannot stat: No such file or directory cpio: mpich/redhat-linux-build/src/gromacs/selection/parser.cpp: Cannot stat: No such file or directory cpio: mpich/redhat-linux-build/src/gromacs/selection/parser.h: Cannot stat: No such file or directory cpio: mpich/redhat-linux-build/src/gromacs/selection/parser.y: Cannot stat: No such file or directory cpio: mpich/redhat-linux-build/src/gromacs/selection/scanner.cpp: Cannot stat: No such file or directory cpio: mpich/redhat-linux-build/src/gromacs/selection/scanner.l: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/parser.h: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/parser.y: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/scanner_flex.h: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/selection/parser.cpp: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/selection/parser.h: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/selection/parser.y: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/selection/scanner.cpp: Cannot stat: No such file or directory cpio: mpich_d/redhat-linux-build/src/gromacs/selection/scanner.l: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/parser.h: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/parser.y: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/scanner_flex.h: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/selection/parser.cpp: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/selection/parser.h: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/selection/parser.y: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/selection/scanner.cpp: Cannot stat: No such file or directory cpio: openmpi/redhat-linux-build/src/gromacs/selection/scanner.l: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/parser.h: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/parser.y: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/scanner_flex.h: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/selection/parser.cpp: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/selection/parser.h: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/selection/parser.y: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/selection/scanner.cpp: Cannot stat: No such file or directory cpio: openmpi_d/redhat-linux-build/src/gromacs/selection/scanner.l: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/parser.h: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/parser.y: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/scanner_flex.h: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/selection/parser.cpp: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/selection/parser.h: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/selection/parser.y: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/selection/scanner.cpp: Cannot stat: No such file or directory cpio: serial/redhat-linux-build/src/gromacs/selection/scanner.l: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/parser.h: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/parser.y: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/scanner_flex.h: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/selection/parser.cpp: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/selection/parser.h: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/selection/parser.y: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/selection/scanner.cpp: Cannot stat: No such file or directory cpio: serial_d/redhat-linux-build/src/gromacs/selection/scanner.l: Cannot stat: No such file or directory 44365 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.Z6Dzc5 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd gromacs-2022.3 + . /etc/profile.d/modules.sh ++ . /etc/profile.d/00-modulepath.sh +++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']' +++ : ++ '[' -z '' ']' ++ LMOD_ALLOW_ROOT_USE=yes ++ '[' -n '' ']' ++ '[' yes '!=' yes ']' ++ '[' -z /usr/share/modulefiles ']' ++ findExec READLINK_CMD /usr/bin/readlink readlink ++ Nm=READLINK_CMD ++ confPath=/usr/bin/readlink ++ execNm=readlink ++ eval READLINK_CMD=/usr/bin/readlink +++ READLINK_CMD=/usr/bin/readlink ++ '[' '!' -x /usr/bin/readlink ']' ++ unset Nm confPath execNm ++ findExec PS_CMD /usr/bin/ps ps ++ Nm=PS_CMD ++ confPath=/usr/bin/ps ++ execNm=ps ++ eval PS_CMD=/usr/bin/ps +++ PS_CMD=/usr/bin/ps ++ '[' '!' -x /usr/bin/ps ']' ++ unset Nm confPath execNm ++ findExec EXPR_CMD /usr/bin/expr expr ++ Nm=EXPR_CMD ++ confPath=/usr/bin/expr ++ execNm=expr ++ eval EXPR_CMD=/usr/bin/expr +++ EXPR_CMD=/usr/bin/expr ++ '[' '!' -x /usr/bin/expr ']' ++ unset Nm confPath execNm ++ findExec BASENAME_CMD /usr/bin/basename basename ++ Nm=BASENAME_CMD ++ confPath=/usr/bin/basename ++ execNm=basename ++ eval BASENAME_CMD=/usr/bin/basename +++ BASENAME_CMD=/usr/bin/basename ++ '[' '!' -x /usr/bin/basename ']' ++ unset Nm confPath execNm ++ unset -f findExec ++ '[' -f /proc/48981/exe ']' +++ /usr/bin/readlink /proc/48981/exe ++ my_shell=/usr/bin/bash +++ /usr/bin/expr /usr/bin/bash : '-*\(.*\)' ++ my_shell=/usr/bin/bash +++ /usr/bin/basename /usr/bin/bash ++ my_shell=bash ++ case ${my_shell} in ++ '[' -f /usr/share/lmod/lmod/init/bash ']' ++ . /usr/share/lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/share/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx ++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT LMOD_ALLOW_ROOT_USE READLINK_CMD + for p in '' _d + for mpi in '' mpich openmpi + test -n '' + pushd serial ~/build/BUILD/gromacs-2022.3/serial ~/build/BUILD/gromacs-2022.3 + [[ '' = openmpi ]] + /usr/bin/cmake --build redhat-linux-build -j4 --verbose --target check Change Dir: '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 check /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/gmake -f CMakeFiles/Makefile2 check gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles 90 /usr/bin/gmake -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/depend /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/gmx_objlib.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/DependInfo.cmake "--color=" Dependencies file "src/programs/CMakeFiles/gmx_objlib.dir/gmx.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/gmx_objlib.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/accessors.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/programs/CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/gmx_objlib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target gmx_objlib gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/build Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/barrier.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_malloc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". 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directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 4%] Built target thread_mpi /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend [ 4%] Built target release-version-info /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend [ 5%] Built target clFFT /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend [ 5%] Built target linearalgebra /usr/bin/gmake -f src/programs/CMakeFiles/view_objlib.dir/build.make src/programs/CMakeFiles/view_objlib.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection 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Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/compiler_depend.internal". Dependencies file "src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". Dependencies file "src/programs/CMakeFiles/view_objlib.dir/view/3dview.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/view_objlib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target scanner Dependencies file "src/programs/CMakeFiles/view_objlib.dir/view/buttons.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/view_objlib.dir/compiler_depend.internal". 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[ 5%] Building CXX object src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/external/googletest/googletest && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_LANG_CXX11 -Dgtest_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wno-comment -Wall -Wshadow -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=1 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/src/gtest-all.cc Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/correlationgrid.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/correlationhistory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/correlationtensor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpwritercontext.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/rstparser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/basicoptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/behaviorcollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/options.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/treesupport.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/boxutilities.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/com.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/mshift.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc_simd.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbcenums.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbcmethods.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/rmpbc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/output.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull_rotation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullcoordexpressionparser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/transformationcoordinate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/random/seed.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/random/tabulatednormaldistribution.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/restraint/manager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/restraint/restraintmdmodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/centerofmass.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/compiler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/evaluate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/indexutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/mempool.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/nbsearch.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/params.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/parsetree.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/poscalc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/position.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/scanner_internal.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectioncollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionbehavior.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selelem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selmethod.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selvalue.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_compare.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_keywords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_merge.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_permute.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_position.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_same.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_simple.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/symrec.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/simd/support.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/statistics/statistics.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/swap/swapcoords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/cubicsplinetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/forcetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/resourcedivision.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/taskassignment.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/usergpuids.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/physicalnodecommunicator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/pleasecite.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/programcontext.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/smalloc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/strconvert.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/strdb.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sycl_version_information.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/textreader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/textwriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target libgromacs gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 62%] Built target libgromacs /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend /usr/bin/gmake -f api/gmxapi/CMakeFiles/gmxapi.dir/build.make api/gmxapi/CMakeFiles/gmxapi.dir/depend /usr/bin/gmake -f api/nblib/CMakeFiles/nblib.dir/build.make api/nblib/CMakeFiles/nblib.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/gmxapi /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'src/programs/CMakeFiles/gmx.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/context.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/box.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/exceptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/integrator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/interactions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/gmxapi.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/md.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/mdmodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". [ 62%] Built target gmx Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". /usr/bin/gmake -f tests/CMakeFiles/gmxtests.dir/build.make tests/CMakeFiles/gmxtests.dir/depend Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/molecules.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/session.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/tests/CMakeFiles/gmxtests.dir/DependInfo.cmake "--color=" Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/status.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/particlesequencer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/system.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/particletype.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/version.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/simulationstate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/topology.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/topologyhelpers.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f tests/CMakeFiles/gmxtests.dir/build.make tests/CMakeFiles/gmxtests.dir/build Dependencies file "api/nblib/CMakeFiles/nblib.dir/tpr.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/util/setup.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target gmxapi gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/gmxapi/CMakeFiles/gmxapi.dir/build.make api/gmxapi/CMakeFiles/gmxapi.dir/build Dependencies file "api/nblib/CMakeFiles/nblib.dir/virials.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'tests/CMakeFiles/gmxtests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'api/gmxapi/CMakeFiles/gmxapi.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' Consolidate compiler generated dependencies of target nblib gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/CMakeFiles/nblib.dir/build.make api/nblib/CMakeFiles/nblib.dir/build [ 62%] Built target gmxtests [ 63%] Built target gmxapi gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'api/nblib/CMakeFiles/nblib.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 64%] Built target nblib /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/depend /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples/CMakeFiles/argon-forces-integration.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples/CMakeFiles/methane-water-integration.dir/DependInfo.cmake "--color=" Dependencies file "api/nblib/samples/CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples/CMakeFiles/methane-water-integration.dir/compiler_depend.internal". Dependencies file "api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/samples/CMakeFiles/argon-forces-integration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target methane-water-integration Consolidate compiler generated dependencies of target argon-forces-integration gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/build /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'api/nblib/samples/CMakeFiles/methane-water-integration.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 64%] Built target methane-water-integration [ 64%] Built target argon-forces-integration [ 64%] Linking CXX shared library ../../../../lib/libgtest.so cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.11.0 -o ../../../../lib/libgtest.so.1.11.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgtest.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 64%] Built target gtest /usr/bin/gmake -f src/external/googletest/googlemock/CMakeFiles/gmock.dir/build.make src/external/googletest/googlemock/CMakeFiles/gmock.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/external/googletest/googlemock /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/external/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/external/googletest/googlemock/CMakeFiles/gmock.dir/build.make src/external/googletest/googlemock/CMakeFiles/gmock.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 64%] Building CXX object src/external/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd 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-I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/loggertest.cpp.o -MF CMakeFiles/testutils.dir/loggertest.cpp.o.d -o CMakeFiles/testutils.dir/loggertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/mpi_printer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/mpi_printer.cpp.o -MF CMakeFiles/testutils.dir/mpi_printer.cpp.o.d -o CMakeFiles/testutils.dir/mpi_printer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/mpi_printer.cpp [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/mpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/mpitest.cpp.o -MF CMakeFiles/testutils.dir/mpitest.cpp.o.d -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/mpitest.cpp [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o -MF CMakeFiles/testutils.dir/refdata.cpp.o.d -o CMakeFiles/testutils.dir/refdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata.cpp [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o -MF CMakeFiles/testutils.dir/refdata_xml.cpp.o.d -o CMakeFiles/testutils.dir/refdata_xml.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata_xml.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::(anonymous namespace)::MockLogTarget::gmock_writeEntry(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:62:5, inlined from 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.198941].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp: In member function 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:35: note: '' declared here 113 | EXPECT_CALL(target, writeEntry(testing::_)).Times(0); | ^ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:48: In member function 'testing::internal::MatcherBase, std::allocator >*>::MatcherBase(testing::internal::MatcherBase, std::allocator >*> const&)', inlined from 'testing::Matcher, std::allocator >*>::Matcher(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextInputStream::gmock_readLine(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:71:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211524].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/simulationdatabase.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/simulationdatabase.cpp.o -MF CMakeFiles/testutils.dir/simulationdatabase.cpp.o.d -o CMakeFiles/testutils.dir/simulationdatabase.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/simulationdatabase.cpp /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:43: note: '' declared here 90 | EXPECT_CALL(inputStream_, readLine(_)).WillRepeatedly(Invoke(this, &Impl::readInputLine)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextOutputStream::gmock_write(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:78:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211531].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:41: note: '' declared here 92 | EXPECT_CALL(outputStream_, write(_)).WillRepeatedly(Invoke(this, &Impl::addOutput)); | ^ [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/stdiohelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/testutils/CMakeFiles/testutils.dir/stringtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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../../../lib/libgtest.so.1.11.0 [ 68%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -MF CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/testasserts_tests.cpp [ 68%] Linking CXX static library ../../../lib/libnblib_test_infrastructure.a cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -P CMakeFiles/nblib_test_infrastructure.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib_test_infrastructure.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libnblib_test_infrastructure.a 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-grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o -MF CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o.d -o CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator_mpi.cpp [ 68%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o cd 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -MF CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/xvgtest_tests.cpp [ 68%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -MF CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o.d -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 68%] Built target utility-mpi-test /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 68%] Building CXX object src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxlib/nonbonded/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/arrayref.cpp.o -MF CMakeFiles/utility-test.dir/arrayref.cpp.o.d -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/arrayref.cpp [ 70%] Linking CXX executable ../../../bin/testutils-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/testutils-test.dir/interactivetest.cpp.o" "CMakeFiles/testutils-test.dir/refdata_tests.cpp.o" "CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o" "CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o" "CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o" -o ../../../bin/testutils-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libtestutils.a ../../../lib/libtestutils.a ../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 [ 70%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 70%] Linking CXX static library ../../../../lib/libmdrun_test_infrastructure.a cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -P CMakeFiles/mdrun_test_infrastructure.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun_test_infrastructure.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrun_test_infrastructure.a CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o /usr/bin/ranlib ../../../../lib/libmdrun_test_infrastructure.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 70%] Built target mdrun_test_infrastructure /usr/bin/gmake -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix 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executable ../../../../../bin/nonbonded-fep-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nonbonded-fep-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o" 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-I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS 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-DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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'/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 71%] Built target nonbonded-fep-test /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 71%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask32.cpp.o -MF CMakeFiles/utility-test.dir/bitmask32.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask32.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o -MF CMakeFiles/mdlib-test.dir/ebin.cpp.o.d -o CMakeFiles/mdlib-test.dir/ebin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/ebin.cpp [ 71%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingamplitudelookup.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -MF CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o.d -o CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energydrifttracker.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask64.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask64.cpp.o -MF CMakeFiles/utility-test.dir/bitmask64.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask64.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -MF CMakeFiles/mdlib-test.dir/energyoutput.cpp.o.d -o CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energyoutput.cpp [ 71%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingforceprovider.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o -MF CMakeFiles/awh-test.dir/biasgrid.cpp.o.d -o CMakeFiles/awh-test.dir/biasgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasgrid.cpp [ 71%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingoptions.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o -MF CMakeFiles/utility-test.dir/bitmask128.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask128.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biassharing.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o -MF CMakeFiles/awh-test.dir/biasstate.cpp.o.d -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasstate.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o -MF CMakeFiles/mdlib-test.dir/expanded.cpp.o.d -o CMakeFiles/mdlib-test.dir/expanded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/expanded.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/cstringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/cstringutil.cpp.o -MF CMakeFiles/utility-test.dir/cstringutil.cpp.o.d -o CMakeFiles/utility-test.dir/cstringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/cstringutil.cpp [ 71%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o -MF CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o.d -o CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/defaultinitializationallocator.cpp [ 72%] Linking CXX executable ../../../../../bin/density_fitting_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/density_fitting_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/density_fitting_applied_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs.so.7.0.0 ../../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgtest.so.1.11.0 [ 72%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 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72%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -MF CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o.d -o CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/freeenergyparameters.cpp [ 72%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -MF CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o.d -o CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/fixedcapacityvector.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 72%] Built target density_fitting_applied_forces-test /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 72%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmminputgenerator.cpp [ 72%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -MF CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o.d -o CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/inmemoryserializer.cpp [ 73%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmtopologypreprocessor.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrog.cpp [ 73%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreeserializer.cpp [ 73%] Linking CXX executable ../../../../../bin/awh-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/awh-test.dir/awh_setup.cpp.o" "CMakeFiles/awh-test.dir/bias.cpp.o" "CMakeFiles/awh-test.dir/biasgrid.cpp.o" "CMakeFiles/awh-test.dir/biassharing.cpp.o" "CMakeFiles/awh-test.dir/biasstate.cpp.o" "CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o" "CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/awh-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs.so.7.0.0 ../../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgtest.so.1.11.0 [ 73%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmoptions.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreetransform.cpp [ 74%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmforceprovider.cpp [ 74%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o -MF CMakeFiles/utility-test.dir/listoflists.cpp.o.d -o CMakeFiles/utility-test.dir/listoflists.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/listoflists.cpp [ 74%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o -MF CMakeFiles/mdlib-test.dir/settle.cpp.o.d -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settle.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmm.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 74%] Built target awh-test /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 74%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -MF CMakeFiles/applied_forces-test.dir/electricfield.cpp.o.d -o CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests/electricfield.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 74%] Linking CXX executable ../../../../../bin/qmmm_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/qmmm_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/qmmm_applied_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs.so.7.0.0 ../../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgtest.so.1.11.0 [ 74%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestdata.cpp [ 74%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o -MF CMakeFiles/utility-test.dir/logger.cpp.o.d -o CMakeFiles/utility-test.dir/logger.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/logger.cpp [ 74%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 74%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -MF CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o.d -o CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/mdmodulesnotifier.cpp [ 74%] Linking CXX executable ../../../../bin/applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/applied_forces-test.dir/electricfield.cpp.o" "CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/applied_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 74%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o -MF CMakeFiles/mdlib-test.dir/shake.cpp.o.d -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/shake.cpp [ 74%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o -MF CMakeFiles/utility-test.dir/message_string_collector.cpp.o.d -o CMakeFiles/utility-test.dir/message_string_collector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/message_string_collector.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 74%] Built target qmmm_applied_forces-test [ 74%] Built target applied_forces-test /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/depend /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/DependInfo.cmake "--color=" cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o [ 75%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o -MF CMakeFiles/listed_forces-test.dir/bonded.cpp.o.d -o CMakeFiles/listed_forces-test.dir/bonded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/bonded.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -MF CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o.d -o CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o -MF CMakeFiles/utility-test.dir/path.cpp.o.d -o CMakeFiles/utility-test.dir/path.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/path.cpp [ 75%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -MF CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o.d -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/simulationsignal.cpp [ 75%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/nbnxm-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nbnxm-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o" "CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/nbnxm-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 75%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroups.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroups.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroups.cpp [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -MF CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o.d -o CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator.cpp [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o -MF CMakeFiles/utility-test.dir/range.cpp.o.d -o CMakeFiles/utility-test.dir/range.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/range.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target nbnxm-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp [ 76%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o -MF CMakeFiles/listed_forces-test.dir/pairs.cpp.o.d -o CMakeFiles/listed_forces-test.dir/pairs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/pairs.cpp [ 76%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroupscog.cpp [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o -MF CMakeFiles/utility-test.dir/strconvert.cpp.o.d -o CMakeFiles/utility-test.dir/strconvert.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.207740].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp: In member function 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:33: note: '' declared here 77 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockHelpTopic::writeHelpBase)); | ^ [ 76%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp:45: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 76%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -MF CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o.d -o CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringtoenumvalueconverter.cpp [ 76%] Linking CXX static library ../../../../lib/libonlinehelp-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -P CMakeFiles/onlinehelp-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libonlinehelp-test-shared.a "CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o" "CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libonlinehelp-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target onlinehelp-test-shared /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o -MF CMakeFiles/domdec-test.dir/hashedmap.cpp.o.d -o CMakeFiles/domdec-test.dir/hashedmap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/hashedmap.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp [ 76%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -MF CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o.d -o CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/localatomsetmanager.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -MF CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o.d -o CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/position_restraints.cpp [ 76%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o -MF CMakeFiles/utility-test.dir/stringutil.cpp.o.d -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringutil.cpp [ 76%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -MF CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o.d -o CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/wholemoleculetransform.cpp [ 76%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Linking CXX executable ../../../../bin/domdec-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-test.dir/hashedmap.cpp.o" "CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o" "CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 76%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Linking CXX executable ../../../../bin/mdlib-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o" "CMakeFiles/mdlib-test.dir/calcvir.cpp.o" "CMakeFiles/mdlib-test.dir/constr.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/ebin.cpp.o" "CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o" "CMakeFiles/mdlib-test.dir/energyoutput.cpp.o" "CMakeFiles/mdlib-test.dir/expanded.cpp.o" "CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrog.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/settle.cpp.o" "CMakeFiles/mdlib-test.dir/settletestdata.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/shake.cpp.o" "CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o" "CMakeFiles/mdlib-test.dir/updategroups.cpp.o" "CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o" "CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdlib-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 76%] Linking CXX executable ../../../../bin/listed_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/listed_forces-test.dir/bonded.cpp.o" "CMakeFiles/listed_forces-test.dir/pairs.cpp.o" "CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o" "CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/listed_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target domdec-test [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o -MF CMakeFiles/utility-test.dir/template_mp.cpp.o.d -o CMakeFiles/utility-test.dir/template_mp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/template_mp.cpp [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o -MF CMakeFiles/utility-test.dir/textreader.cpp.o.d -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textreader.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target listed_forces-test /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp [ 76%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target mdlib-test /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp:61: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -MF CMakeFiles/ewald-test.dir/pmegathertest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o -MF CMakeFiles/utility-test.dir/textwriter.cpp.o.d -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textwriter.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o -MF CMakeFiles/utility-test.dir/typetraits.cpp.o.d -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/typetraits.cpp [ 76%] Linking CXX executable ../../../../bin/domdec-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o" "CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-mpi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 76%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Linking CXX executable ../../../../bin/utility-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-test.dir/alignedallocator.cpp.o" "CMakeFiles/utility-test.dir/arrayref.cpp.o" "CMakeFiles/utility-test.dir/bitmask32.cpp.o" "CMakeFiles/utility-test.dir/bitmask64.cpp.o" "CMakeFiles/utility-test.dir/bitmask128.cpp.o" "CMakeFiles/utility-test.dir/cstringutil.cpp.o" "CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o" "CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o" "CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o" "CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o" "CMakeFiles/utility-test.dir/listoflists.cpp.o" "CMakeFiles/utility-test.dir/logger.cpp.o" "CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o" "CMakeFiles/utility-test.dir/message_string_collector.cpp.o" "CMakeFiles/utility-test.dir/path.cpp.o" "CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o" "CMakeFiles/utility-test.dir/range.cpp.o" "CMakeFiles/utility-test.dir/strconvert.cpp.o" "CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o" "CMakeFiles/utility-test.dir/stringutil.cpp.o" "CMakeFiles/utility-test.dir/template_mp.cpp.o" "CMakeFiles/utility-test.dir/textreader.cpp.o" "CMakeFiles/utility-test.dir/textwriter.cpp.o" "CMakeFiles/utility-test.dir/typetraits.cpp.o" "CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target domdec-mpi-test /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o -MF CMakeFiles/fft-test.dir/fft.cpp.o.d -o CMakeFiles/fft-test.dir/fft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests/fft.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests/fft.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -MF CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o.d -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o -MF CMakeFiles/ewald-test.dir/pme.cpp.o.d -o CMakeFiles/ewald-test.dir/pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Linking CXX executable ../../../../bin/fft-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fft-test.dir/fft.cpp.o" "CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fft-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 76%] Linking CXX executable ../../../../bin/ewald-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o" "CMakeFiles/ewald-test.dir/pmegathertest.cpp.o" "CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o" "CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o" "CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o" "CMakeFiles/ewald-test.dir/pme.cpp.o" "CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/ewald-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target fft-test /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/clfftinitializer.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_availability.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_stream_manager.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -MF CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/hostallocator.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target ewald-test /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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-DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -MF CMakeFiles/hardware-test.dir/cpuinfo.cpp.o.d -o CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/cpuinfo.cpp [ 76%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/hardwaretopology.cpp [ 76%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/mockhardwaretopology.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Built target utility-test /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 76%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -MF CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o.d -o CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/arrayrefwithpadding.cpp [ 76%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o -MF CMakeFiles/hardware-test.dir/device_management.cpp.o.d -o CMakeFiles/hardware-test.dir/device_management.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -MF CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/pinnedmemorychecker.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o -MF CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers_ocl.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers_ocl.cpp:42: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_event_ocl.h:44, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_event.h:117, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gpueventsynchronizer.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -MF CMakeFiles/math-test.dir/coordinatetransformation.cpp.o.d -o CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/coordinatetransformation.cpp [ 77%] Linking CXX executable ../../../../bin/hardware-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/hardware-test.dir/cpuinfo.cpp.o" "CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/device_management.cpp.o" "CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/hardware-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -MF CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/typecasts.cpp [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 77%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o -MF CMakeFiles/math-test.dir/densityfittingforce.cpp.o.d -o CMakeFiles/math-test.dir/densityfittingforce.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfittingforce.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:36: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockThreadAffinityAccess::gmock_setCurrentThreadAffinityToCore(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:70:5, inlined from 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.222050].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp: In member function 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:50: note: '' declared here 59 | ON_CALL(*this, setCurrentThreadAffinityToCore(_)).WillByDefault(Return(true)); | ^ [ 77%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast 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-I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/invertmatrix.cpp.o -MF CMakeFiles/math-test.dir/invertmatrix.cpp.o.d -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/invertmatrix.cpp [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o -MF CMakeFiles/math-test.dir/matrix.cpp.o.d -o CMakeFiles/math-test.dir/matrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/matrix.cpp [ 78%] Linking CXX static library ../../../../lib/libmdrunutility-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -P CMakeFiles/mdrunutility-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrunutility-test-shared.a "CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o" "CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libmdrunutility-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 78%] Built target mdrunutility-test-shared /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 78%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -MF CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o.d -o CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/accessor_policy.cpp [ 78%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o -MF CMakeFiles/math-test.dir/multidimarray.cpp.o.d -o CMakeFiles/math-test.dir/multidimarray.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/multidimarray.cpp [ 78%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o -MF CMakeFiles/math-test.dir/optimization.cpp.o.d -o CMakeFiles/math-test.dir/optimization.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/optimization.cpp [ 80%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o -MF CMakeFiles/math-test.dir/paddedvector.cpp.o.d -o CMakeFiles/math-test.dir/paddedvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/paddedvector.cpp [ 80%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o cd 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src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o -MF CMakeFiles/mdspan-test.dir/layouts.cpp.o.d -o CMakeFiles/mdspan-test.dir/layouts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/layouts.cpp [ 80%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o -MF CMakeFiles/math-test.dir/vectypes.cpp.o.d -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/vectypes.cpp [ 80%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 80%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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-mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o" "CMakeFiles/mdspan-test.dir/extents.cpp.o" "CMakeFiles/mdspan-test.dir/extensions.cpp.o" "CMakeFiles/mdspan-test.dir/layouts.cpp.o" "CMakeFiles/mdspan-test.dir/mdspan.cpp.o" "CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdspan-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 80%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o cd 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-I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -MF CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o.d -o CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/multipletimestepping.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 80%] Built target mdspan-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpformat.cpp [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp [ 80%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpwritercontext.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:47: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.220014].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:36: note: '' declared here 106 | EXPECT_CALL(firstSub, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.219159].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:38: note: '' declared here 95 | EXPECT_CALL(rootTopic_, writeHelp(_)); | ^ [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Linking CXX executable ../../../../bin/mdtypes-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdtypes-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o" "CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o" "CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o" "CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o" "CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdtypes-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 81%] Linking CXX executable ../../../../bin/onlinehelp-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o" "CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/onlinehelp-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 81%] Linking CXX executable ../../../../bin/math-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o" "CMakeFiles/math-test.dir/coordinatetransformation.cpp.o" "CMakeFiles/math-test.dir/densityfit.cpp.o" "CMakeFiles/math-test.dir/dofit.cpp.o" "CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o" "CMakeFiles/math-test.dir/functions.cpp.o" "CMakeFiles/math-test.dir/gausstransform.cpp.o" "CMakeFiles/math-test.dir/densityfittingforce.cpp.o" "CMakeFiles/math-test.dir/invertmatrix.cpp.o" "CMakeFiles/math-test.dir/matrix.cpp.o" "CMakeFiles/math-test.dir/multidimarray.cpp.o" "CMakeFiles/math-test.dir/neldermead.cpp.o" "CMakeFiles/math-test.dir/optimization.cpp.o" "CMakeFiles/math-test.dir/paddedvector.cpp.o" "CMakeFiles/math-test.dir/vectypes.cpp.o" "CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/math-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 81%] Built target onlinehelp-test /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 81%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -MF CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o.d -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp [ 81%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o -MF CMakeFiles/options-test.dir/filenameoption.cpp.o.d -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/filenameoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 81%] Built target mdtypes-test /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 81%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o -MF CMakeFiles/pbcutil-test.dir/com.cpp.o.d -o CMakeFiles/pbcutil-test.dir/com.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/com.cpp [ 81%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -MF CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o.d -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/filenameoptionmanager.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:49: In member function 'testing::internal::MatcherBase, std::allocator > const&>::MatcherBase(testing::internal::MatcherBase, std::allocator > const&> const&)', inlined from 'testing::Matcher, std::allocator > const&>::Matcher(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:514:18, inlined from '(anonymous namespace)::MockOptionStorage::gmock_convertValue(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:113:5, inlined from '__ct ' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:5, inlined from '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:138:43: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.394537].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp: In member function '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:32: note: '' declared here 147 | ON_CALL(*this, convertValue(_)).WillByDefault(WithArg<0>(Invoke(this, &MockOptionStorage::addValue))); | ^ [ 81%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o -MF CMakeFiles/pbcutil-test.dir/mshift.cpp.o.d -o CMakeFiles/pbcutil-test.dir/mshift.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/mshift.cpp [ 81%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o -MF CMakeFiles/options-test.dir/option.cpp.o.d -o CMakeFiles/options-test.dir/option.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/option.cpp [ 81%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o -MF CMakeFiles/options-test.dir/optionsassigner.cpp.o.d -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/optionsassigner.cpp [ 81%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o -MF CMakeFiles/options-test.dir/repeatingsection.cpp.o.d -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/repeatingsection.cpp [ 81%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/pbcutil-test.dir/pbc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbc.cpp [ 82%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -MF CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o.d -o CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbcenums.cpp [ 82%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/pbcutil-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbcutil-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pbcutil-test.dir/com.cpp.o" "CMakeFiles/pbcutil-test.dir/mshift.cpp.o" "CMakeFiles/pbcutil-test.dir/pbc.cpp.o" "CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o" "CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pbcutil-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o -MF CMakeFiles/options-test.dir/timeunitmanager.cpp.o.d -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/timeunitmanager.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/treesupport.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY 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gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/exponentialdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/random/tests/CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -MF CMakeFiles/random-test.dir/exponentialdistribution.cpp.o.d -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/exponentialdistribution.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o -MF CMakeFiles/random-test.dir/gammadistribution.cpp.o.d -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/gammadistribution.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o -MF CMakeFiles/random-test.dir/normaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/normaldistribution.cpp [ 82%] Linking CXX executable ../../../../bin/options-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o" "CMakeFiles/options-test.dir/filenameoption.cpp.o" "CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o" "CMakeFiles/options-test.dir/option.cpp.o" "CMakeFiles/options-test.dir/optionsassigner.cpp.o" "CMakeFiles/options-test.dir/repeatingsection.cpp.o" "CMakeFiles/options-test.dir/timeunitmanager.cpp.o" "CMakeFiles/options-test.dir/treesupport.cpp.o" "CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/options-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o -MF CMakeFiles/random-test.dir/seed.cpp.o.d -o CMakeFiles/random-test.dir/seed.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/seed.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -MF CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/tabulatednormaldistribution.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o -MF CMakeFiles/random-test.dir/threefry.cpp.o.d -o CMakeFiles/random-test.dir/threefry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/threefry.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target math-test /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/restraint/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/restraint/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o -MF CMakeFiles/restraintpotential-test.dir/manager.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests/manager.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformintdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformintdistribution.cpp [ 82%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/restraint/tests && 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CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/restraintpotential-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/restraintpotential-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/restraintpotential-test.dir/manager.cpp.o" "CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/restraintpotential-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformrealdistribution.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target restraintpotential-test /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/splinetable.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tables/tests/CMakeFiles/table-test.dir/splinetable.cpp.o -MF CMakeFiles/table-test.dir/splinetable.cpp.o.d -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests/splinetable.cpp [ 82%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tables/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/random-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -MF CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o.d -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests/usergpuids.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target random-test /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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../../../../bin/table-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/table-test.dir/splinetable.cpp.o" "CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/table-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/taskassignment-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o" "CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/taskassignment-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Linking CXX executable ../../../../bin/timing-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/timing-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/timing-test.dir/timing.cpp.o" "CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/timing-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target taskassignment-test /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests/CMakeFiles/topology-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -MF CMakeFiles/topology-test.dir/exclusionblocks.cpp.o.d -o CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/exclusionblocks.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target timing-test /usr/bin/gmake -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/tests 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pulling/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/pull.cpp.o -MF CMakeFiles/pull-test.dir/pull.cpp.o.d -o CMakeFiles/pull-test.dir/pull.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/tests/pull.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target options-test /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o -MF CMakeFiles/simd-test.dir/base.cpp.o.d -o CMakeFiles/simd-test.dir/base.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/base.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target table-test /usr/bin/gmake -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/mp11.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/compat/tests/CMakeFiles/compat-test.dir/mp11.cpp.o -MF CMakeFiles/compat-test.dir/mp11.cpp.o.d -o CMakeFiles/compat-test.dir/mp11.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests/mp11.cpp [ 82%] Building CXX object src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pulling/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/idef.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -MF CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o.d -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/bootstrap_loadstore.cpp [ 82%] Linking CXX executable ../../../../bin/pull-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pull-test.dir/pull.cpp.o" "CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pull-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lmuparser -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/pointers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-o CMakeFiles/compat-test.dir/pointers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests/pointers.cpp [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o -MF CMakeFiles/topology-test.dir/mtop.cpp.o.d -o CMakeFiles/topology-test.dir/mtop.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/mtop.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o -MF CMakeFiles/simd-test.dir/scalar.cpp.o.d -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar.cpp [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/compat-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/compat-test.dir/mp11.cpp.o" "CMakeFiles/compat-test.dir/pointers.cpp.o" "CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/compat-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target pull-test /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o -MF CMakeFiles/gmxana-test.dir/entropy.cpp.o.d -o CMakeFiles/gmxana-test.dir/entropy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/entropy.cpp [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_chi.cpp [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o -MF CMakeFiles/topology-test.dir/symtab.cpp.o.d -o CMakeFiles/topology-test.dir/symtab.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/symtab.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o -MF CMakeFiles/simd-test.dir/scalar_util.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_util.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Built target compat-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 82%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_mindist.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o -MF CMakeFiles/simd-test.dir/scalar_math.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_math.cpp [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genconf.cpp [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/topsort.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o -MF CMakeFiles/simd-test.dir/simd.cpp.o.d -o CMakeFiles/simd-test.dir/simd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd.cpp [ 82%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/gmxana-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxana-test.dir/entropy.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o" "CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxana-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genrestr.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint.cpp [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_atomtype.cpp [ 83%] Linking CXX executable ../../../../bin/topology-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/topology-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/topology-test.dir/exclusionblocks.cpp.o" "CMakeFiles/topology-test.dir/idef.cpp.o" "CMakeFiles/topology-test.dir/mtop.cpp.o" "CMakeFiles/topology-test.dir/symtab.cpp.o" "CMakeFiles/topology-test.dir/topsort.cpp.o" "CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/topology-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_bond_atomtype.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint_util.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/grompp_directives.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/insert_molecules.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Built target gmxana-test [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/readir.cpp /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o -MF CMakeFiles/simd-test.dir/simd_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Built target topology-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In static member function 'static std::vector > gmx::test::SimdMathTest::generateTestPoints(Range, std::size_t)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^~~~~~~~~~~~ [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/solvate.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/topdirs.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Linking CXX executable ../../../../bin/pdb2gmx1-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx1-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx1-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_memory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_memory.cpp.o -MF CMakeFiles/simd-test.dir/simd_memory.cpp.o.d -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_memory.cpp [ 83%] Linking CXX executable ../../../../bin/gmxpreprocess-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxpreprocess-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 83%] Linking CXX executable ../../../../bin/pdb2gmx2-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx2-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx2-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_vector_operations.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o -MF CMakeFiles/simd-test.dir/simd4.cpp.o.d -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_floatingpoint.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Built target pdb2gmx1-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Built target gmxpreprocess-test /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o -MF CMakeFiles/correlations-test.dir/autocorr.cpp.o.d -o CMakeFiles/correlations-test.dir/autocorr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/autocorr.cpp [ 83%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -MF CMakeFiles/correlations-test.dir/correlationdataset.cpp.o.d -o CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/correlationdataset.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Built target pdb2gmx2-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 83%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/datatest.cpp [ 83%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o -MF CMakeFiles/correlations-test.dir/expfit.cpp.o.d -o CMakeFiles/correlations-test.dir/expfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/expfit.cpp [ 84%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 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src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_vector_operations.cpp [ 84%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Linking CXX executable ../../../../bin/correlations-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 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/usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228063].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228064].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_dataStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:73:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237615].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:35: note: '' declared here 579 | EXPECT_CALL(*this, dataStarted(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237620].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:40: note: '' declared here 583 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237628].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:47: note: '' declared here 589 | EXPECT_CALL(*this, pointsAdded(_)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237636].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:41: note: '' declared here 593 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238074].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:40: note: '' declared here 617 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238109].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:43: note: '' declared here 621 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238382].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:41: note: '' declared here 623 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In member function 'compareSimdMathFunction.constprop': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:309:87: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 309 | std::vector testPoints = generateTestPoints(compareSettings.range, s_nPoints); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237552].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:44: note: '' declared here 551 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237570].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:47: note: '' declared here 557 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237575].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:45: note: '' declared here 559 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 84%] Built target correlations-test /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make 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cmake_link_script CMakeFiles/energyanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o" "CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/energyanalysis-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 84%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o -MF CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o.d -o CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/outputadapters.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 84%] Built target pdb2gmx3-test /usr/bin/gmake -f src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build.make src/gromacs/tools/tests/CMakeFiles/tool-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests/CMakeFiles/tool-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build.make src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 84%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/dump.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/dump.cpp.o -MF CMakeFiles/tool-test.dir/dump.cpp.o.d -o CMakeFiles/tool-test.dir/dump.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/dump.cpp [ 84%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o -MF CMakeFiles/tool-test.dir/helpwriting.cpp.o.d -o CMakeFiles/tool-test.dir/helpwriting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/helpwriting.cpp [ 84%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o -MF CMakeFiles/tool-test.dir/report_methods.cpp.o.d -o CMakeFiles/tool-test.dir/report_methods.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/report_methods.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 84%] Built target energyanalysis-test /usr/bin/gmake -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 84%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/checkpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/checkpoint.cpp.o -MF CMakeFiles/fileio-test.dir/checkpoint.cpp.o.d -o CMakeFiles/fileio-test.dir/checkpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/checkpoint.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In function 'generateTestPoints': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^ [ 84%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o -MF CMakeFiles/tool-test.dir/trjconv.cpp.o.d -o CMakeFiles/tool-test.dir/trjconv.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/trjconv.cpp [ 85%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o -MF CMakeFiles/fileio-test.dir/confio.cpp.o.d -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/confio.cpp [ 85%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/filemd5.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/fileio-test.dir/filemd5.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/filemd5.cpp [ 85%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o -MF CMakeFiles/coordinateio-test.dir/requirements.cpp.o.d -o CMakeFiles/coordinateio-test.dir/requirements.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/requirements.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 85%] Built target simd-test /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/tool-test.dir/dump.cpp.o" "CMakeFiles/tool-test.dir/helpwriting.cpp.o" "CMakeFiles/tool-test.dir/report_methods.cpp.o" "CMakeFiles/tool-test.dir/trjconv.cpp.o" "CMakeFiles/tool-test.dir/convert-tpr.cpp.o" "CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/tool-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 86%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o -MF CMakeFiles/selection-test.dir/nbsearch.cpp.o.d -o CMakeFiles/selection-test.dir/nbsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/nbsearch.cpp [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setbothtime.cpp [ 86%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setstarttime.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -MF CMakeFiles/coordinateio-test.dir/settimestep.cpp.o.d -o CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/settimestep.cpp [ 87%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o -MF CMakeFiles/selection-test.dir/poscalc.cpp.o.d -o CMakeFiles/selection-test.dir/poscalc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/poscalc.cpp [ 87%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o -MF CMakeFiles/fileio-test.dir/readinp.cpp.o.d -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/readinp.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 87%] Built target tool-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o -MF CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o.d -o CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/fileioxdrserializer.cpp [ 87%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include 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"CMakeFiles/coordinateio-test.dir/testmodule.cpp.o" "CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/coordinateio-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 87%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o -MF CMakeFiles/fileio-test.dir/tngio.cpp.o.d -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/tngio.cpp [ 87%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o -MF CMakeFiles/fileio-test.dir/xvgio.cpp.o.d -o CMakeFiles/fileio-test.dir/xvgio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/xvgio.cpp [ 87%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/trajectory_writing.cpp [ 87%] Linking CXX executable ../../../../bin/fileio-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fileio-test.dir/checkpoint.cpp.o" "CMakeFiles/fileio-test.dir/confio.cpp.o" "CMakeFiles/fileio-test.dir/filemd5.cpp.o" "CMakeFiles/fileio-test.dir/mrcserializer.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o" "CMakeFiles/fileio-test.dir/readinp.cpp.o" "CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o" "CMakeFiles/fileio-test.dir/tngio.cpp.o" "CMakeFiles/fileio-test.dir/xvgio.cpp.o" "CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fileio-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 87%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Linking CXX executable ../../../../bin/mdrun-output-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-output-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o" "CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o" "CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o" "CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o" "CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-output-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 87%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o -MF CMakeFiles/selection-test.dir/selectionoption.cpp.o.d -o CMakeFiles/selection-test.dir/selectionoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectionoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 87%] Built target coordinateio-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/densityfittingmodule.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 87%] Built target fileio-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/mimic.cpp [ 87%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o -MF CMakeFiles/selection-test.dir/toputils.cpp.o.d -o CMakeFiles/selection-test.dir/toputils.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/toputils.cpp [ 87%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -MF CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/exactcontinuation.cpp [ 88%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/selection-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/selection-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/selection-test.dir/indexutil.cpp.o" "CMakeFiles/selection-test.dir/nbsearch.cpp.o" "CMakeFiles/selection-test.dir/poscalc.cpp.o" "CMakeFiles/selection-test.dir/selectioncollection.cpp.o" "CMakeFiles/selection-test.dir/selectionoption.cpp.o" "CMakeFiles/selection-test.dir/toputils.cpp.o" "CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/selection-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 88%] Linking CXX executable ../../../../bin/mdrun-modules-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-modules-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o" "CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o" "CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o" "CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-modules-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -MF CMakeFiles/mdrun-test.dir/swapcoords.cpp.o.d -o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/swapcoords.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -MF CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o.d -o CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tabulated_bonded_interactions.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o -MF CMakeFiles/mdrun-io-test.dir/grompp.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/grompp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/grompp.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/freezegroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 88%] Built target mdrun-modules-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory 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/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-io-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o" "CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o" "CMakeFiles/mdrun-io-test.dir/grompp.cpp.o" "CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o" "CMakeFiles/mdrun-io-test.dir/termination.cpp.o" "CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-io-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 90%] Linking CXX executable ../../../../bin/mdrun-single-rank-algorithms-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-single-rank-algorithms-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-single-rank-algorithms-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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"CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o" "CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 90%] Built target mdrun-single-rank-algorithms-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 90%] Built target selection-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -MF CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o.d -o CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tpitest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 90%] Built target mdrun-io-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/domain_decomposition.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-tpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-tpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/mimic.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o -MF CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o.d -o CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisim.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 90%] Built target mdrun-tpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simple_mdrun.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 91%] Linking CXX executable ../../../../bin/mdrun-non-integrator-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-non-integrator-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-non-integrator-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 91%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 91%] Built target mdrun-mpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange_equivalence.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 92%] Built target mdrun-multisim-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 92%] Built target mdrun-multisim-replex-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-mpi-pme-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-pme-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o" "CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-pme-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_basic.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 92%] Built target mdrun-non-integrator-test [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-equivalence-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-equivalence-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 92%] Built target mdrun-mpi-pme-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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/usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-basic-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-basic-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-basic-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_coupling.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_constraints.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 93%] Built target mdrun-mpi-coordination-basic-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-constraints-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o" "CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-fep-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Built target mdrun-mpi-coordination-coupling-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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'/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/virtualsites.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Built target mdrun-fep-test /usr/bin/gmake -f api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/build.make api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/restraint.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-pull-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-pull-test.dir/pull.cpp.o" "CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-pull-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 94%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/runner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/runner.cpp.o -MF CMakeFiles/gmxapi-test.dir/runner.cpp.o.d -o CMakeFiles/gmxapi-test.dir/runner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/runner.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-simulator-comparison-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-simulator-comparison-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o" "CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-simulator-comparison-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-vsites-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-vsites-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o" "CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-vsites-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 94%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/status.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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-funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/status.cpp.o -MF CMakeFiles/gmxapi-test.dir/status.cpp.o.d -o CMakeFiles/gmxapi-test.dir/status.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/status.cpp [ 94%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o -MF CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o.d -o CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/stopsignaler.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Built target mdrun-vsites-test /usr/bin/gmake -f api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/build.make api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/workflow/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/workflow/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/build.make api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Building CXX object api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/workflow.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/workflow/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/workflow/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/workflow/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/workflow.cpp.o -MF CMakeFiles/workflow-details-test.dir/workflow.cpp.o.d -o CMakeFiles/workflow-details-test.dir/workflow.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/workflow/tests/workflow.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Built target mdrun-simulator-comparison-test /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/integrator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/integrator.cpp.o -MF CMakeFiles/nblib-integrator-test.dir/integrator.cpp.o.d -o CMakeFiles/nblib-integrator-test.dir/integrator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/integrator.cpp [ 94%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/system.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/system.cpp.o -MF CMakeFiles/gmxapi-test.dir/system.cpp.o.d -o CMakeFiles/gmxapi-test.dir/system.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/system.cpp [ 94%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/version.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 94%] Built target mdrun-pull-test /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-setup-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-setup-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/CMakeFiles/nblib-setup-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/box.cpp.o -MF CMakeFiles/nblib-setup-test.dir/box.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/box.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/box.cpp [ 96%] Linking CXX executable ../../../../../bin/workflow-details-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/workflow/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/workflow-details-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/workflow-details-test.dir/workflow.cpp.o" "CMakeFiles/workflow-details-test.dir/__/__/__/__/__/src/testutils/unittest_main.cpp.o" ../../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../../bin/workflow-details-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgmxapi.so.0.3.1 ../../../../../lib/libmdrun_test_infrastructure.a ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgmock.so.1.11.0 ../../../../../lib/libgtest.so.1.11.0 [ 96%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include 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/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxapi-test.dir/restraint.cpp.o" "CMakeFiles/gmxapi-test.dir/runner.cpp.o" "CMakeFiles/gmxapi-test.dir/status.cpp.o" "CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o" "CMakeFiles/gmxapi-test.dir/system.cpp.o" "CMakeFiles/gmxapi-test.dir/version.cpp.o" "CMakeFiles/gmxapi-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o" ../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/gmxapi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgmxapi.so.0.3.1 ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-integrator-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-integrator-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Built target workflow-details-test /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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../../../bin/nblib-integrator-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libnblib_test_infrastructure.a ../../../lib/libnblib_gmx.so.0.1.0 ../../../lib/libtestutils.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/particletype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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/builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/tpr.cpp: In member function 'virtual void nblib::test::TprReaderTest_Spc2Reads_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/tpr.cpp:91:48: warning: ignoring return value of 'std::vector<_Tp, _Alloc>::size_type std::vector<_Tp, _Alloc>::size() const [with _Tp = gmx::BasicVector; _Alloc = std::allocator >; size_type = long unsigned int]', declared with attribute 'nodiscard' [-Wunused-result] 91 | EXPECT_NO_THROW(tprReader.coordinates_.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:58: /usr/include/c++/13/bits/stl_vector.h:989:7: note: declared here 989 | size() const _GLIBCXX_NOEXCEPT | ^~~~ [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/pbcholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/pbcholder.cpp.o -MF CMakeFiles/nblib-setup-test.dir/pbcholder.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/pbcholder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/pbcholder.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Built target gmxapi-test /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-integration-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-integration-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/CMakeFiles/nblib-integration-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-integration-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-integration-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o -MF CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/gmxcalculator.cpp [ 96%] Linking CXX executable ../../../bin/nblib-tpr-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-tpr-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-tpr-test.dir/tpr.cpp.o" "CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../bin/nblib-tpr-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libmdrun_test_infrastructure.a ../../../lib/libnblib_test_infrastructure.a ../../../lib/libnblib_gmx.so.0.1.0 ../../../lib/libtestutils.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Built target nblib-integrator-test /usr/bin/gmake -f api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/build.make api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/build.make api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/bondtypes.cpp [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/molecules.cpp.o -MF CMakeFiles/nblib-setup-test.dir/molecules.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/molecules.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/gmxcalculator.cpp [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o -MF CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/nbkernelsystem.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Built target nblib-tpr-test /usr/bin/gmake -f api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/build.make api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/build.make api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/helpers.cpp [ 96%] Building CXX object api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/util/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/setup.cpp.o -MF CMakeFiles/nblib-util-test.dir/setup.cpp.o.d -o CMakeFiles/nblib-util-test.dir/setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/tests/setup.cpp [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/nbnxmsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/nbnxmsetup.cpp.o -MF CMakeFiles/nblib-setup-test.dir/nbnxmsetup.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/nbnxmsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/nbnxmsetup.cpp [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/simstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/simstate.cpp.o -MF CMakeFiles/nblib-integration-test.dir/simstate.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/simstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/simstate.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/nbnxm.h:114, from /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/nbnxmsetup.cpp:49: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 96%] Building CXX object api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/traits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/util/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/traits.cpp.o -MF CMakeFiles/nblib-util-test.dir/traits.cpp.o.d -o CMakeFiles/nblib-util-test.dir/traits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/tests/traits.cpp [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/topology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/topology.cpp.o -MF CMakeFiles/nblib-setup-test.dir/topology.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/topology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/topology.cpp [ 96%] Building CXX object api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/util/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Linking CXX executable ../../../../bin/nblib-util-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/util/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-util-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-util-test.dir/setup.cpp.o" "CMakeFiles/nblib-util-test.dir/traits.cpp.o" "CMakeFiles/nblib-util-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../../bin/nblib-util-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libnblib_test_infrastructure.a ../../../../lib/libnblib_gmx.so.0.1.0 ../../../../lib/libtestutils.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 97%] Linking CXX executable ../../../bin/nblib-integration-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-integration-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o" "CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o" "CMakeFiles/nblib-integration-test.dir/simstate.cpp.o" "CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../bin/nblib-integration-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libnblib_test_infrastructure.a ../../../lib/libnblib_gmx.so.0.1.0 ../../../lib/libtestutils.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 97%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/listedtesthelpers.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 97%] Built target nblib-util-test /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 97%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/kernels.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp [ 97%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/typetests.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255580].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255581].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256649].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256650].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256653].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:34: note: '' declared here 140 | EXPECT_CALL(topic1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256656].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:32: note: '' declared here 141 | EXPECT_CALL(sub1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256659].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:32: note: '' declared here 142 | EXPECT_CALL(sub2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256662].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:32: note: '' declared here 143 | EXPECT_CALL(sub3, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256665].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:34: note: '' declared here 144 | EXPECT_CALL(topic2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.254599].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:33: note: '' declared here 92 | EXPECT_CALL(topic, writeHelp(_)); | ^ [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 97%] Built target nblib-integration-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 97%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -MF CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp [ 97%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o [ 97%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/virials.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/virials.cpp.o -MF CMakeFiles/nblib-setup-test.dir/virials.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/virials.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/virials.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/calculator.cpp [ 97%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Linking CXX executable ../../../../bin/mdrunutility-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o" "CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 97%] Linking CXX executable ../../../bin/nblib-setup-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-setup-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-setup-test.dir/box.cpp.o" "CMakeFiles/nblib-setup-test.dir/interactions.cpp.o" "CMakeFiles/nblib-setup-test.dir/particletype.cpp.o" "CMakeFiles/nblib-setup-test.dir/pbcholder.cpp.o" "CMakeFiles/nblib-setup-test.dir/molecules.cpp.o" "CMakeFiles/nblib-setup-test.dir/nbnxmsetup.cpp.o" "CMakeFiles/nblib-setup-test.dir/topology.cpp.o" "CMakeFiles/nblib-setup-test.dir/virials.cpp.o" "CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../bin/nblib-setup-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libmdrun_test_infrastructure.a ../../../lib/libnblib_test_infrastructure.a ../../../lib/libnblib_gmx.so.0.1.0 ../../../lib/libtestutils.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243854].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:32: note: '' declared here 116 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243700].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:32: note: '' declared here 101 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.242871].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:32: note: '' declared here 86 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240024].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:27: note: '' declared here 71 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240768].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240769].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244202].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:27: note: '' declared here 148 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244205].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244206].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244046].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:31: note: '' declared here 131 | EXPECT_CALL(mod, writeHelp(_)); | ^ [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 98%] Built target mdrunutility-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity_mpi.cpp [ 98%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/conversions.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:106:5, inlined from 'gmx::test::MockOptionsModule::MockOptionsModule()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249346].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockOptionsModule::MockOptionsModule()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:24: note: '' declared here 113 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249218].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:24: note: '' declared here 89 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249224].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:29: note: '' declared here 90 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockModule::checkHelpContext)); | ^ [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineparser.cpp [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/mdrunutility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o" "CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-mpi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o -MF CMakeFiles/commandline-test.dir/filenm.cpp.o.d -o CMakeFiles/commandline-test.dir/filenm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/filenm.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 98%] Built target mdrunutility-mpi-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -MF CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/analysisdata.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 98%] Built target nblib-setup-test /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/moduletest.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o -MF CMakeFiles/commandline-test.dir/pargs.cpp.o.d -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/pargs.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/angle.cpp [ 98%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/shiftforces.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/clustsize.cpp [ 98%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/transformations.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include 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src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/commandline-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o" "CMakeFiles/commandline-test.dir/filenm.cpp.o" "CMakeFiles/commandline-test.dir/pargs.cpp.o" "CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/commandline-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -MF CMakeFiles/analysisdata-test.dir/arraydata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/arraydata.cpp [ 98%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/nblib-listed-forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-listed-forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../../bin/nblib-listed-forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libnblib_test_infrastructure.a ../../../../lib/libnblib_gmx.so.0.1.0 ../../../../lib/libtestutils.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o -MF CMakeFiles/analysisdata-test.dir/average.cpp.o.d -o CMakeFiles/analysisdata-test.dir/average.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/average.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280783].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280784].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.284025].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.284026].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/convert_trj.cpp [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o -MF CMakeFiles/analysisdata-test.dir/histogram.cpp.o.d -o CMakeFiles/analysisdata-test.dir/histogram.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/histogram.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser 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src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target commandline-test /usr/bin/gmake -f api/nblib/CMakeFiles/nblib-tests.dir/build.make api/nblib/CMakeFiles/nblib-tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/nblib/CMakeFiles/nblib-tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f api/nblib/CMakeFiles/nblib-tests.dir/build.make api/nblib/CMakeFiles/nblib-tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'api/nblib/CMakeFiles/nblib-tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target nblib-tests [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/pairdist.cpp [100%] Linking CXX executable ../../../../bin/analysisdata-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o" "CMakeFiles/analysisdata-test.dir/arraydata.cpp.o" "CMakeFiles/analysisdata-test.dir/average.cpp.o" "CMakeFiles/analysisdata-test.dir/histogram.cpp.o" "CMakeFiles/analysisdata-test.dir/lifetime.cpp.o" "CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/analysisdata-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/rdf.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target nblib-listed-forces-test [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/sasa.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/select.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/topologyinformation.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/trajectory.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/unionfind.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target analysisdata-test [100%] Linking CXX executable ../../../../bin/trajectoryanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/trajectoryanalysis-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target trajectoryanalysis-test /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles/tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target tests /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Running all tests except physical validation /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build Start 1: GmxapiExternalInterfaceTests 1/87 Test #1: GmxapiExternalInterfaceTests ................... Passed 1.98 sec Start 2: GmxapiInternalInterfaceTests 2/87 Test #2: GmxapiInternalInterfaceTests ................... Passed 0.38 sec Start 3: NbLibListedForcesTests 3/87 Test #3: NbLibListedForcesTests ......................... Passed 0.08 sec Start 4: NbLibSamplesTestArgon 4/87 Test #4: NbLibSamplesTestArgon .......................... Passed 0.07 sec Start 5: NbLibSamplesTestMethaneWater 5/87 Test #5: NbLibSamplesTestMethaneWater ................... Passed 0.02 sec Start 6: NbLibUtilTests 6/87 Test #6: NbLibUtilTests ................................. Passed 0.02 sec Start 7: NbLibSetupTests 7/87 Test #7: NbLibSetupTests ................................ Passed 0.02 sec Start 8: NbLibTprTests 8/87 Test #8: NbLibTprTests .................................. Passed 0.03 sec Start 9: NbLibIntegrationTests 9/87 Test #9: NbLibIntegrationTests .......................... Passed 0.03 sec Start 10: NbLibIntegratorTests 10/87 Test #10: NbLibIntegratorTests ........................... Passed 0.01 sec Start 11: TestUtilsUnitTests 11/87 Test #11: TestUtilsUnitTests ............................. Passed 0.02 sec Start 12: TestUtilsMpiUnitTests 12/87 Test #12: TestUtilsMpiUnitTests .......................... Passed 0.03 sec Start 13: UtilityUnitTests 13/87 Test #13: UtilityUnitTests ............................... Passed 0.04 sec Start 14: UtilityMpiUnitTests 14/87 Test #14: UtilityMpiUnitTests ............................ Passed 0.01 sec Start 15: GmxlibTests 15/87 Test #15: GmxlibTests .................................... Passed 0.06 sec Start 16: MdlibUnitTest 16/87 Test #16: MdlibUnitTest .................................. Passed 0.13 sec Start 17: AwhTest 17/87 Test #17: AwhTest ........................................ Passed 0.08 sec Start 18: DensityFittingAppliedForcesUnitTest 18/87 Test #18: DensityFittingAppliedForcesUnitTest ............ Passed 0.02 sec Start 19: QMMMAppliedForcesUnitTest 19/87 Test #19: QMMMAppliedForcesUnitTest ...................... Passed 0.06 sec Start 20: AppliedForcesUnitTest 20/87 Test #20: AppliedForcesUnitTest .......................... Passed 0.01 sec Start 21: ListedForcesTest 21/87 Test #21: ListedForcesTest ............................... Passed 0.07 sec Start 22: NbnxmTests 22/87 Test #22: NbnxmTests ..................................... Passed 0.01 sec Start 23: CommandLineUnitTests 23/87 Test #23: CommandLineUnitTests ........................... Passed 0.03 sec Start 24: DomDecTests 24/87 Test #24: DomDecTests .................................... Passed 0.01 sec Start 25: DomDecMpiTests 25/87 Test #25: DomDecMpiTests ................................. Passed 0.08 sec Start 26: EwaldUnitTests 26/87 Test #26: EwaldUnitTests ................................. Passed 0.27 sec Start 27: FFTUnitTests 27/87 Test #27: FFTUnitTests ................................... Passed 0.06 sec Start 28: GpuUtilsUnitTests 28/87 Test #28: GpuUtilsUnitTests .............................. Passed 0.02 sec Start 29: HardwareUnitTests 29/87 Test #29: HardwareUnitTests .............................. Passed 0.09 sec Start 30: MathUnitTests 30/87 Test #30: MathUnitTests .................................. Passed 0.07 sec Start 31: MdrunUtilityUnitTests 31/87 Test #31: MdrunUtilityUnitTests .......................... Passed 0.02 sec Start 32: MdrunUtilityMpiUnitTests 32/87 Test #32: MdrunUtilityMpiUnitTests ....................... Passed 0.02 sec Start 33: MDSpanTests 33/87 Test #33: MDSpanTests .................................... Passed 0.01 sec Start 34: MdtypesUnitTest 34/87 Test #34: MdtypesUnitTest ................................ Passed 0.02 sec Start 35: OnlineHelpUnitTests 35/87 Test #35: OnlineHelpUnitTests ............................ Passed 0.02 sec Start 36: OptionsUnitTests 36/87 Test #36: OptionsUnitTests ............................... Passed 0.02 sec Start 37: PbcutilUnitTest 37/87 Test #37: PbcutilUnitTest ................................ Passed 0.03 sec Start 38: RandomUnitTests 38/87 Test #38: RandomUnitTests ................................ Passed 0.03 sec Start 39: RestraintTests 39/87 Test #39: RestraintTests ................................. Passed 0.01 sec Start 40: TableUnitTests 40/87 Test #40: TableUnitTests ................................. Passed 0.06 sec Start 41: TaskAssignmentUnitTests 41/87 Test #41: TaskAssignmentUnitTests ........................ Passed 0.02 sec Start 42: GmxTimingTests 42/87 Test #42: GmxTimingTests ................................. Passed 0.01 sec Start 43: TopologyTest 43/87 Test #43: TopologyTest ................................... Passed 0.02 sec Start 44: PullTest 44/87 Test #44: PullTest ....................................... Passed 0.03 sec Start 45: SimdUnitTests 45/87 Test #45: SimdUnitTests .................................. Passed 0.03 sec Start 46: CompatibilityHelpersTests 46/87 Test #46: CompatibilityHelpersTests ...................... Passed 0.01 sec Start 47: GmxAnaTest 47/87 Test #47: GmxAnaTest ..................................... Passed 0.71 sec Start 48: GmxPreprocessTests 48/87 Test #48: GmxPreprocessTests ............................. Passed 0.63 sec Start 49: Pdb2gmx1Test 49/87 Test #49: Pdb2gmx1Test ................................... Passed 1.12 sec Start 50: Pdb2gmx2Test 50/87 Test #50: Pdb2gmx2Test ................................... Passed 1.11 sec Start 51: Pdb2gmx3Test 51/87 Test #51: Pdb2gmx3Test ................................... Passed 2.86 sec Start 52: CorrelationsTest 52/87 Test #52: CorrelationsTest ............................... Passed 0.09 sec Start 53: AnalysisDataUnitTests 53/87 Test #53: AnalysisDataUnitTests .......................... Passed 0.03 sec Start 54: CoordinateIOTests 54/87 Test #54: CoordinateIOTests .............................. Passed 0.05 sec Start 55: TrajectoryAnalysisUnitTests 55/87 Test #55: TrajectoryAnalysisUnitTests .................... Passed 0.55 sec Start 56: EnergyAnalysisUnitTests 56/87 Test #56: EnergyAnalysisUnitTests ........................ Passed 0.06 sec Start 57: ToolUnitTests 57/87 Test #57: ToolUnitTests .................................. Passed 0.99 sec Start 58: FileIOTests 58/87 Test #58: FileIOTests .................................... Passed 0.02 sec Start 59: SelectionUnitTests 59/87 Test #59: SelectionUnitTests ............................. Passed 0.17 sec Start 60: MdrunOutputTests 60/87 Test #60: MdrunOutputTests ............................... Passed 0.10 sec Start 61: MdrunModulesTests 61/87 Test #61: MdrunModulesTests .............................. Passed 0.21 sec Start 62: MdrunIOTests 62/87 Test #62: MdrunIOTests ................................... Passed 0.08 sec Start 63: MdrunTestsOneRank 63/87 Test #63: MdrunTestsOneRank .............................. Passed 0.68 sec Start 64: MdrunTestsTwoRanks 64/87 Test #64: MdrunTestsTwoRanks ............................. Passed 59.30 sec Start 65: MdrunSingleRankAlgorithmsTests 65/87 Test #65: MdrunSingleRankAlgorithmsTests ................. Passed 0.20 sec Start 66: MdrunNonIntegratorTests 66/87 Test #66: MdrunNonIntegratorTests ........................ Passed 0.66 sec Start 67: MdrunTpiTests 67/87 Test #67: MdrunTpiTests .................................. Passed 0.39 sec Start 68: MdrunMpiTests 68/87 Test #68: MdrunMpiTests .................................. Passed 39.40 sec Start 69: MdrunMultiSimTests 69/87 Test #69: MdrunMultiSimTests ............................. Passed 0.01 sec Start 70: MdrunMultiSimReplexTests 70/87 Test #70: MdrunMultiSimReplexTests ....................... Passed 0.01 sec Start 71: MdrunMultiSimReplexEquivalenceTests 71/87 Test #71: MdrunMultiSimReplexEquivalenceTests ............ Passed 0.01 sec Start 72: MdrunMpi1RankPmeTests 72/87 Test #72: MdrunMpi1RankPmeTests .......................... Passed 0.11 sec Start 73: MdrunMpi2RankPmeTests 73/87 Test #73: MdrunMpi2RankPmeTests .......................... Passed 20.38 sec Start 74: MdrunMpiCoordinationBasicTestsOneRank 74/87 Test #74: MdrunMpiCoordinationBasicTestsOneRank .......... Passed 0.01 sec Start 75: MdrunMpiCoordinationBasicTestsTwoRanks 75/87 Test #75: MdrunMpiCoordinationBasicTestsTwoRanks ......... Passed 0.01 sec Start 76: MdrunMpiCoordinationCouplingTestsOneRank 76/87 Test #76: MdrunMpiCoordinationCouplingTestsOneRank ....... Passed 0.01 sec Start 77: MdrunMpiCoordinationCouplingTestsTwoRanks 77/87 Test #77: MdrunMpiCoordinationCouplingTestsTwoRanks ...... Passed 0.01 sec Start 78: MdrunMpiCoordinationConstraintsTestsOneRank 78/87 Test #78: MdrunMpiCoordinationConstraintsTestsOneRank .... Passed 0.01 sec Start 79: MdrunMpiCoordinationConstraintsTestsTwoRanks 79/87 Test #79: MdrunMpiCoordinationConstraintsTestsTwoRanks ... Passed 0.01 sec Start 80: MdrunFEPTests 80/87 Test #80: MdrunFEPTests .................................. Passed 0.01 sec Start 81: MdrunPullTests 81/87 Test #81: MdrunPullTests ................................. Passed 0.79 sec Start 82: MdrunSimulatorComparison 82/87 Test #82: MdrunSimulatorComparison ....................... Passed 0.02 sec Start 83: MdrunVirtualSiteTests 83/87 Test #83: MdrunVirtualSiteTests .......................... Passed 0.11 sec Start 84: regressiontests/complex 84/87 Test #84: regressiontests/complex ........................ Passed 61.19 sec Start 85: regressiontests/freeenergy 85/87 Test #85: regressiontests/freeenergy ..................... Passed 5.27 sec Start 86: regressiontests/rotation 86/87 Test #86: regressiontests/rotation ....................... Passed 3.10 sec Start 87: regressiontests/essentialdynamics 87/87 Test #87: regressiontests/essentialdynamics .............. Passed 1.00 sec 100% tests passed, 0 tests failed out of 87 Label Time Summary: GTest = 135.06 sec*proc (81 tests) IntegrationTest = 125.70 sec*proc (25 tests) MpiTest = 120.25 sec*proc (19 tests) QuickGpuTest = 43.97 sec*proc (17 tests) SlowTest = 7.40 sec*proc (13 tests) UnitTest = 1.95 sec*proc (43 tests) Total Test time (real) = 205.84 sec gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target run-ctest-nophys /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles/check.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/check.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' [100%] Built target check gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build/CMakeFiles 0 gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial/redhat-linux-build' + [[ '' = openmpi ]] + popd ~/build/BUILD/gromacs-2022.3 + test -n '' + for mpi in '' mpich openmpi + test -n mpich + module load mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + pushd mpich ~/build/BUILD/gromacs-2022.3/mpich ~/build/BUILD/gromacs-2022.3 + [[ mpich = openmpi ]] + /usr/bin/cmake --build redhat-linux-build -j4 --verbose --target check Change Dir: '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 check /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/gmake -f CMakeFiles/Makefile2 check gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles 89 /usr/bin/gmake -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/gmake -f src/external/googletest/googletest/CMakeFiles/gtest.dir/build.make src/external/googletest/googletest/CMakeFiles/gtest.dir/depend /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/external/googletest/googletest 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"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' Dependencies file "src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". /usr/bin/gmake -f src/external/googletest/googletest/CMakeFiles/gtest.dir/build.make src/external/googletest/googletest/CMakeFiles/gtest.dir/build Consolidate compiler generated dependencies of target mdrun_objlib gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/accessors.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 0%] Building CXX object src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/external/googletest/googletest && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wall -Wshadow -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=1 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/src/gtest-all.cc Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.copy.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.stockham.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". [ 1%] Built target mdrun_objlib /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/generator.transpose.gcn.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/lifetime.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/plan.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationdata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/repo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/stdafx.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/mttk.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/transform.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.CPU.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.GPU.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/statisticalTimer.extern.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/statTimer/stdafx.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target clFFT Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build [ 1%] Generating release version information cd /builddir/build/BUILD/gromacs-2022.3 && /usr/bin/cmake -D PYTHON_EXECUTABLE=/usr/bin/python3.12 -D PROJECT_VERSION=2022.3-Fedora39 -D PROJECT_SOURCE_DIR=/builddir/build/BUILD/gromacs-2022.3 -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/referencetemperaturemanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinemodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlinemodulemanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/commandline/cmdlineoptionsmodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/behaviorcollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/options.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/treesupport.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/boxutilities.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/com.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/mshift.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc_simd.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbcenums.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbcmethods.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/rmpbc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/output.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull_rotation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullcoordexpressionparser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/transformationcoordinate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/random/seed.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/compiler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/evaluate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/indexutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/mempool.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/nbsearch.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/params.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/parsetree.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/poscalc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/position.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/scanner_internal.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectioncollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionbehavior.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selelem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_keywords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_merge.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/symrec.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/simd/support.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/statistics/statistics.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/swap/swapcoords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sycl_version_information.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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CMakeFiles/testutils.dir/mpitest.cpp.o.d -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/mpitest.cpp [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o -MF CMakeFiles/testutils.dir/refdata.cpp.o.d -o CMakeFiles/testutils.dir/refdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::(anonymous namespace)::MockLogTarget::gmock_writeEntry(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:62:5, inlined from 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.198941].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp: In member function 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:35: note: '' declared here 113 | EXPECT_CALL(target, writeEntry(testing::_)).Times(0); | ^ [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o -MF CMakeFiles/testutils.dir/refdata_xml.cpp.o.d -o CMakeFiles/testutils.dir/refdata_xml.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata_xml.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:48: In member function 'testing::internal::MatcherBase, std::allocator >*>::MatcherBase(testing::internal::MatcherBase, std::allocator >*> const&)', inlined from 'testing::Matcher, std::allocator >*>::Matcher(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextInputStream::gmock_readLine(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:71:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211524].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:43: note: '' declared here 90 | EXPECT_CALL(inputStream_, readLine(_)).WillRepeatedly(Invoke(this, &Impl::readInputLine)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextOutputStream::gmock_write(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:78:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211531].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:41: note: '' declared here 92 | EXPECT_CALL(outputStream_, write(_)).WillRepeatedly(Invoke(this, &Impl::addOutput)); | ^ [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/simulationdatabase.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/stdiohelper.cpp.o -MF CMakeFiles/testutils.dir/stdiohelper.cpp.o.d -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/stdiohelper.cpp [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/stringtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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-g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -MF CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o.d -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 66%] Linking CXX executable ../../../bin/testutils-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script 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../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 66%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/arrayref.cpp.o -MF CMakeFiles/utility-test.dir/arrayref.cpp.o.d -o CMakeFiles/utility-test.dir/arrayref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/arrayref.cpp [ 66%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 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src/testutils/tests/CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/testutils/tests/CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -MF CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/testasserts_tests.cpp [ 66%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include 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src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX static library ../../../../lib/libmdrun_test_infrastructure.a cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -P CMakeFiles/mdrun_test_infrastructure.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun_test_infrastructure.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrun_test_infrastructure.a CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o /usr/bin/ranlib ../../../../lib/libmdrun_test_infrastructure.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 67%] Built target mdrun_test_infrastructure /usr/bin/gmake -f src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends 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CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator_mpi.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../bin/utility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o" "CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 68%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask32.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask32.cpp.o -MF CMakeFiles/utility-test.dir/bitmask32.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask32.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 68%] Built target testutils-mpi-test /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o -MF CMakeFiles/utility-test.dir/bitmask128.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask128.cpp [ 68%] Building CXX object src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -MF CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o.d -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/calc_verletbuf.cpp [ 68%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -MF CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o.d -o CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/inmemoryserializer.cpp [ 69%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o -MF CMakeFiles/mdlib-test.dir/constr.cpp.o.d -o CMakeFiles/mdlib-test.dir/constr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constr.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 69%] Built target testutils-test /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 69%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreeserializer.cpp [ 69%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o -MF CMakeFiles/awh-test.dir/awh_setup.cpp.o.d -o CMakeFiles/awh-test.dir/awh_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/awh_setup.cpp [ 69%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreetransform.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o -MF CMakeFiles/awh-test.dir/bias.cpp.o.d -o CMakeFiles/awh-test.dir/bias.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestdata.cpp [ 70%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o -MF CMakeFiles/utility-test.dir/listoflists.cpp.o.d -o CMakeFiles/utility-test.dir/listoflists.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/listoflists.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o -MF CMakeFiles/mdlib-test.dir/ebin.cpp.o.d -o CMakeFiles/mdlib-test.dir/ebin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/ebin.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -MF CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o.d -o CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energydrifttracker.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o -MF CMakeFiles/utility-test.dir/logger.cpp.o.d -o CMakeFiles/utility-test.dir/logger.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/logger.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -MF CMakeFiles/mdlib-test.dir/energyoutput.cpp.o.d -o CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energyoutput.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o -MF CMakeFiles/awh-test.dir/biassharing.cpp.o.d -o CMakeFiles/awh-test.dir/biassharing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biassharing.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -MF CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o.d -o CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/mdmodulesnotifier.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o -MF CMakeFiles/awh-test.dir/biasstate.cpp.o.d -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasstate.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o -MF CMakeFiles/utility-test.dir/message_string_collector.cpp.o.d -o CMakeFiles/utility-test.dir/message_string_collector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/message_string_collector.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o -MF CMakeFiles/utility-test.dir/path.cpp.o.d -o CMakeFiles/utility-test.dir/path.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/path.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -MF CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o.d -o CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias_fep_lambda_state.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o -MF CMakeFiles/mdlib-test.dir/expanded.cpp.o.d -o CMakeFiles/mdlib-test.dir/expanded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/expanded.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -MF CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o.d -o CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o -MF CMakeFiles/utility-test.dir/range.cpp.o.d -o CMakeFiles/utility-test.dir/range.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/range.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -MF CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o.d -o CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/freeenergyparameters.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o -MF CMakeFiles/utility-test.dir/strconvert.cpp.o.d -o CMakeFiles/utility-test.dir/strconvert.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Linking CXX executable ../../../../../bin/awh-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/awh-test.dir/awh_setup.cpp.o" "CMakeFiles/awh-test.dir/bias.cpp.o" "CMakeFiles/awh-test.dir/biasgrid.cpp.o" "CMakeFiles/awh-test.dir/biassharing.cpp.o" "CMakeFiles/awh-test.dir/biasstate.cpp.o" "CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o" "CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/awh-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_mpich.a ../../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp:45: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -MF CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o.d -o CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringtoenumvalueconverter.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrog.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrog.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestdata.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o -MF CMakeFiles/utility-test.dir/stringutil.cpp.o.d -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringutil.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o -MF CMakeFiles/mdlib-test.dir/settle.cpp.o.d -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settle.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o -MF CMakeFiles/utility-test.dir/template_mp.cpp.o.d -o CMakeFiles/utility-test.dir/template_mp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/template_mp.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textreader.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o -MF CMakeFiles/mdlib-test.dir/shake.cpp.o.d -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/shake.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o -MF CMakeFiles/utility-test.dir/textwriter.cpp.o.d -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textwriter.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -MF CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o.d -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/simulationsignal.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o -MF CMakeFiles/utility-test.dir/typetraits.cpp.o.d -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/typetraits.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroups.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroups.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroups.cpp [ 73%] Linking CXX executable ../../../../bin/utility-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-test.dir/alignedallocator.cpp.o" "CMakeFiles/utility-test.dir/arrayref.cpp.o" "CMakeFiles/utility-test.dir/bitmask32.cpp.o" "CMakeFiles/utility-test.dir/bitmask64.cpp.o" "CMakeFiles/utility-test.dir/bitmask128.cpp.o" "CMakeFiles/utility-test.dir/cstringutil.cpp.o" "CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o" "CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o" "CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o" "CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o" 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/usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroupscog.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 73%] Built target awh-test /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 73%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfitting.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -MF CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o.d -o CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/wholemoleculetransform.cpp [ 73%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingamplitudelookup.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 73%] Built target nonbonded-fep-test /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 73%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmminputgenerator.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 74%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingforceprovider.cpp [ 74%] Linking CXX executable ../../../../bin/mdlib-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o" "CMakeFiles/mdlib-test.dir/calcvir.cpp.o" "CMakeFiles/mdlib-test.dir/constr.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/ebin.cpp.o" "CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o" "CMakeFiles/mdlib-test.dir/energyoutput.cpp.o" "CMakeFiles/mdlib-test.dir/expanded.cpp.o" "CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrog.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/settle.cpp.o" "CMakeFiles/mdlib-test.dir/settletestdata.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/shake.cpp.o" "CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o" "CMakeFiles/mdlib-test.dir/updategroups.cpp.o" "CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o" "CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdlib-test -Wl,-rpath,/usr/lib64/mpich/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmtopologypreprocessor.cpp [ 74%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingoptions.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmoptions.cpp [ 74%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -DGMX_CP2K=0 -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmforceprovider.cpp [ 74%] Linking CXX executable ../../../../../bin/density_fitting_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/density_fitting_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/density_fitting_applied_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_mpich.a ../../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser 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CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmm.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../../bin/qmmm_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/qmmm_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/qmmm_applied_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_mpich.a ../../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target utility-test /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -MF CMakeFiles/applied_forces-test.dir/electricfield.cpp.o.d -o CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests/electricfield.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target density_fitting_applied_forces-test /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o -MF CMakeFiles/listed_forces-test.dir/bonded.cpp.o.d -o CMakeFiles/listed_forces-test.dir/bonded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/bonded.cpp [ 75%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/applied_forces-test.dir/electricfield.cpp.o" "CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/applied_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o -MF CMakeFiles/listed_forces-test.dir/pairs.cpp.o.d -o CMakeFiles/listed_forces-test.dir/pairs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/pairs.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target mdlib-test /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -MF CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o.d -o CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -MF CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o.d -o CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/position_restraints.cpp [ 75%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/nbnxm-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nbnxm-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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/usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/listed_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/listed_forces-test.dir/bonded.cpp.o" "CMakeFiles/listed_forces-test.dir/pairs.cpp.o" "CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o" "CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/listed_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target applied_forces-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target nbnxm-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.207740].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp: In member function 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:33: note: '' declared here 77 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockHelpTopic::writeHelpBase)); | ^ [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX static library ../../../../lib/libonlinehelp-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -P CMakeFiles/onlinehelp-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libonlinehelp-test-shared.a "CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o" "CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libonlinehelp-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target onlinehelp-test-shared /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o -MF CMakeFiles/domdec-test.dir/hashedmap.cpp.o.d -o CMakeFiles/domdec-test.dir/hashedmap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/hashedmap.cpp [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -MF CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o.d -o CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/localatomsetmanager.cpp [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/domdec-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-test.dir/hashedmap.cpp.o" "CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o" "CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target listed_forces-test /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp:61: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/domdec-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o" "CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target qmmm_applied_forces-test /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target domdec-test /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o -MF CMakeFiles/fft-test.dir/fft.cpp.o.d -o CMakeFiles/fft-test.dir/fft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests/fft.cpp [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -MF CMakeFiles/ewald-test.dir/pmegathertest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests/fft.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp [ 75%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp [ 75%] Linking CXX executable ../../../../bin/fft-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fft-test.dir/fft.cpp.o" "CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fft-test -Wl,-rpath,/usr/lib64/mpich/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Built target domdec-mpi-test /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/clfftinitializer.cpp [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_availability.cpp [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_stream_manager.cpp [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -MF CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o.d -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o -MF CMakeFiles/ewald-test.dir/pme.cpp.o.d -o CMakeFiles/ewald-test.dir/pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -MF CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/hostallocator.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 77%] Linking CXX executable ../../../../bin/ewald-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o" "CMakeFiles/ewald-test.dir/pmegathertest.cpp.o" "CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o" "CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o" "CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o" "CMakeFiles/ewald-test.dir/pme.cpp.o" "CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/ewald-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -MF CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/pinnedmemorychecker.cpp [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o -MF CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers_ocl.cpp:42: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_event_ocl.h:44, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_event.h:117, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gpueventsynchronizer.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -MF CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/typecasts.cpp [ 77%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 77%] Linking CXX executable ../../../../bin/gpu_utils-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o" "CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o" "CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o" "CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o" "CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o" "CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o" "CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gpu_utils-test -Wl,-rpath,/usr/lib64/mpich/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 77%] Built target fft-test /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 77%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -MF CMakeFiles/hardware-test.dir/cpuinfo.cpp.o.d -o CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/cpuinfo.cpp [ 77%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/hardwaretopology.cpp [ 77%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/mockhardwaretopology.cpp [ 78%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o -MF CMakeFiles/hardware-test.dir/device_management.cpp.o.d -o CMakeFiles/hardware-test.dir/device_management.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 78%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Linking CXX executable ../../../../bin/hardware-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/hardware-test.dir/cpuinfo.cpp.o" "CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/device_management.cpp.o" "CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/hardware-test -Wl,-rpath,/usr/lib64/mpich/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 78%] Built target ewald-test /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -MF CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o.d -o CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/arrayrefwithpadding.cpp [ 78%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -MF CMakeFiles/math-test.dir/coordinatetransformation.cpp.o.d -o CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/coordinatetransformation.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 78%] Built target gpu_utils-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 78%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:36: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockThreadAffinityAccess::gmock_setCurrentThreadAffinityToCore(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:70:5, inlined from 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.241455].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp: In member function 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:50: note: '' declared here 59 | ON_CALL(*this, setCurrentThreadAffinityToCore(_)).WillByDefault(Return(true)); | ^ [ 78%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o -MF CMakeFiles/math-test.dir/densityfit.cpp.o.d -o CMakeFiles/math-test.dir/densityfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfit.cpp [ 78%] Linking CXX static library ../../../../lib/libmdrunutility-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -P CMakeFiles/mdrunutility-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrunutility-test-shared.a "CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o" "CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libmdrunutility-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 78%] Built target mdrunutility-test-shared /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extensions.cpp.o -MF CMakeFiles/mdspan-test.dir/extensions.cpp.o.d -o CMakeFiles/mdspan-test.dir/extensions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/extensions.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 78%] Built target hardware-test /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o -MF CMakeFiles/mdspan-test.dir/mdspan.cpp.o.d -o CMakeFiles/mdspan-test.dir/mdspan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/mdspan.cpp [ 78%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o cd 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src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -MF CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o.d -o CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/exponentialmovingaverage.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o -MF CMakeFiles/math-test.dir/functions.cpp.o.d -o CMakeFiles/math-test.dir/functions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/functions.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o -MF CMakeFiles/math-test.dir/gausstransform.cpp.o.d -o CMakeFiles/math-test.dir/gausstransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/gausstransform.cpp [ 79%] Linking CXX executable ../../../../bin/mdspan-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdspan-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o" "CMakeFiles/mdspan-test.dir/extents.cpp.o" "CMakeFiles/mdspan-test.dir/extensions.cpp.o" "CMakeFiles/mdspan-test.dir/layouts.cpp.o" "CMakeFiles/mdspan-test.dir/mdspan.cpp.o" "CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdspan-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 79%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o -MF CMakeFiles/math-test.dir/densityfittingforce.cpp.o.d -o CMakeFiles/math-test.dir/densityfittingforce.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfittingforce.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/invertmatrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o -MF CMakeFiles/math-test.dir/matrix.cpp.o.d -o CMakeFiles/math-test.dir/matrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/matrix.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o -MF CMakeFiles/math-test.dir/neldermead.cpp.o.d -o CMakeFiles/math-test.dir/neldermead.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/neldermead.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" 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src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o -MF CMakeFiles/math-test.dir/paddedvector.cpp.o.d -o CMakeFiles/math-test.dir/paddedvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/paddedvector.cpp [ 79%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -MF CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o.d -o CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/multipletimestepping.cpp [ 79%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o cd 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CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Linking CXX executable ../../../../bin/mdtypes-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdtypes-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o" "CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o" "CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o" "CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o" "CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdtypes-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 80%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o -MF CMakeFiles/math-test.dir/vectypes.cpp.o.d -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/vectypes.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 80%] Built target mdspan-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpformat.cpp [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp [ 80%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:47: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.220014].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:36: note: '' declared here 106 | EXPECT_CALL(firstSub, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.219159].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:38: note: '' declared here 95 | EXPECT_CALL(rootTopic_, writeHelp(_)); | ^ [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpwritercontext.cpp [ 80%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Linking CXX executable ../../../../bin/onlinehelp-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o" "CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/onlinehelp-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a [ 80%] Linking CXX executable ../../../../bin/math-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o" "CMakeFiles/math-test.dir/coordinatetransformation.cpp.o" "CMakeFiles/math-test.dir/densityfit.cpp.o" "CMakeFiles/math-test.dir/dofit.cpp.o" "CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o" "CMakeFiles/math-test.dir/functions.cpp.o" "CMakeFiles/math-test.dir/gausstransform.cpp.o" "CMakeFiles/math-test.dir/densityfittingforce.cpp.o" "CMakeFiles/math-test.dir/invertmatrix.cpp.o" "CMakeFiles/math-test.dir/matrix.cpp.o" "CMakeFiles/math-test.dir/multidimarray.cpp.o" "CMakeFiles/math-test.dir/neldermead.cpp.o" "CMakeFiles/math-test.dir/optimization.cpp.o" "CMakeFiles/math-test.dir/paddedvector.cpp.o" "CMakeFiles/math-test.dir/vectypes.cpp.o" "CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/math-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 80%] Built target mdtypes-test /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 80%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -MF CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o.d -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:49: In member function 'testing::internal::MatcherBase, std::allocator > const&>::MatcherBase(testing::internal::MatcherBase, std::allocator > const&> const&)', inlined from 'testing::Matcher, std::allocator > const&>::Matcher(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:514:18, inlined from '(anonymous namespace)::MockOptionStorage::gmock_convertValue(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:113:5, inlined from '__ct ' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:5, inlined from '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:138:43: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.394537].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp: In member function '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:32: note: '' declared here 147 | ON_CALL(*this, convertValue(_)).WillByDefault(WithArg<0>(Invoke(this, &MockOptionStorage::addValue))); | ^ [ 80%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o -MF CMakeFiles/options-test.dir/filenameoption.cpp.o.d -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/filenameoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 80%] Built target onlinehelp-test /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 80%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o -MF CMakeFiles/pbcutil-test.dir/com.cpp.o.d -o CMakeFiles/pbcutil-test.dir/com.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/com.cpp [ 80%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -MF CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o.d -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/filenameoptionmanager.cpp [ 80%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o -MF CMakeFiles/pbcutil-test.dir/mshift.cpp.o.d -o CMakeFiles/pbcutil-test.dir/mshift.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/mshift.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o -MF CMakeFiles/options-test.dir/option.cpp.o.d -o CMakeFiles/options-test.dir/option.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/option.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o -MF CMakeFiles/options-test.dir/optionsassigner.cpp.o.d -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/optionsassigner.cpp [ 82%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY 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-g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o -MF CMakeFiles/pbcutil-test.dir/pbc.cpp.o.d -o CMakeFiles/pbcutil-test.dir/pbc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbc.cpp [ 82%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o -MF CMakeFiles/options-test.dir/repeatingsection.cpp.o.d -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/repeatingsection.cpp [ 82%] Linking CXX executable ../../../../bin/pbcutil-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbcutil-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pbcutil-test.dir/com.cpp.o" "CMakeFiles/pbcutil-test.dir/mshift.cpp.o" "CMakeFiles/pbcutil-test.dir/pbc.cpp.o" "CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o" "CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pbcutil-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 82%] Built target math-test /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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CMakeFiles/random-test.dir/gammadistribution.cpp.o.d -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/gammadistribution.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o -MF CMakeFiles/options-test.dir/timeunitmanager.cpp.o.d -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/timeunitmanager.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o -MF CMakeFiles/random-test.dir/normaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/normaldistribution.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/treesupport.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/tabulatednormaldistribution.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o -MF CMakeFiles/random-test.dir/threefry.cpp.o.d -o CMakeFiles/random-test.dir/threefry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/threefry.cpp [ 82%] Linking CXX executable ../../../../bin/options-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o" "CMakeFiles/options-test.dir/filenameoption.cpp.o" "CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o" "CMakeFiles/options-test.dir/option.cpp.o" "CMakeFiles/options-test.dir/optionsassigner.cpp.o" "CMakeFiles/options-test.dir/repeatingsection.cpp.o" "CMakeFiles/options-test.dir/timeunitmanager.cpp.o" "CMakeFiles/options-test.dir/treesupport.cpp.o" "CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/options-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformintdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformintdistribution.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformrealdistribution.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 82%] Built target pbcutil-test /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 82%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/restraint/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/restraint/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o -MF CMakeFiles/restraintpotential-test.dir/manager.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests/manager.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/restraint/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/restraint/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/random-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/random-test.dir/exponentialdistribution.cpp.o" "CMakeFiles/random-test.dir/gammadistribution.cpp.o" "CMakeFiles/random-test.dir/normaldistribution.cpp.o" "CMakeFiles/random-test.dir/seed.cpp.o" "CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o" "CMakeFiles/random-test.dir/threefry.cpp.o" "CMakeFiles/random-test.dir/uniformintdistribution.cpp.o" "CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o" "CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/random-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 83%] Linking CXX executable ../../../../bin/restraintpotential-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/restraintpotential-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/restraintpotential-test.dir/manager.cpp.o" "CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/restraintpotential-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Built target options-test /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tables/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Built target restraintpotential-test /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -MF CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o.d -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests/usergpuids.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Built target random-test /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/timing/tests/CMakeFiles/timing-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/timing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/timing-test.dir/timing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/tests/timing.cpp [ 83%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build 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Linking CXX executable ../../../../bin/timing-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/timing-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/timing-test.dir/timing.cpp.o" "CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/timing-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 83%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/idef.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers 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-DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o" "CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/taskassignment-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 83%] Linking CXX executable ../../../../bin/table-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/table-test.dir/splinetable.cpp.o" "CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/table-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 83%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o -MF CMakeFiles/topology-test.dir/symtab.cpp.o.d -o CMakeFiles/topology-test.dir/symtab.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/symtab.cpp [ 83%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/topsort.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Linking CXX executable ../../../../bin/topology-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/topology-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/topology-test.dir/exclusionblocks.cpp.o" "CMakeFiles/topology-test.dir/idef.cpp.o" "CMakeFiles/topology-test.dir/mtop.cpp.o" "CMakeFiles/topology-test.dir/symtab.cpp.o" "CMakeFiles/topology-test.dir/topsort.cpp.o" "CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/topology-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Built target timing-test /usr/bin/gmake -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend gmake[3]: Entering directory 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/usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Built target taskassignment-test /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -MF CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o.d -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/bootstrap_loadstore.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 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src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o [ 83%] Linking CXX executable ../../../../bin/compat-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o -MF CMakeFiles/simd-test.dir/scalar_math.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_math.cpp /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/compat-test.dir/mp11.cpp.o" "CMakeFiles/compat-test.dir/pointers.cpp.o" "CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/compat-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o -MF CMakeFiles/simd-test.dir/simd.cpp.o.d -o CMakeFiles/simd-test.dir/simd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Built target pull-test /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/gmxana-test.dir/entropy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/entropy.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint_util.cpp [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_chi.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Built target topology-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/editconf.cpp [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_mindist.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o -MF CMakeFiles/simd-test.dir/simd_integer.cpp.o.d -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_integer.cpp [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o -MF CMakeFiles/simd-test.dir/simd_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genconf.cpp [ 84%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In static member function 'static std::vector > gmx::test::SimdMathTest::generateTestPoints(Range, std::size_t)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^~~~~~~~~~~~ [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genion.cpp [ 84%] Linking CXX executable ../../../../bin/gmxana-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxana-test.dir/entropy.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o" "CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxana-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genrestr.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 84%] Built target compat-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_atomtype.cpp [ 84%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_memory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_bond_atomtype.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/grompp_directives.cpp [ 85%] Linking CXX executable ../../../../bin/pdb2gmx1-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx1-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx1-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/insert_molecules.cpp [ 85%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_vector_operations.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/readir.cpp [ 85%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o -MF CMakeFiles/simd-test.dir/simd4.cpp.o.d -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4.cpp [ 85%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -MF CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_floatingpoint.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/solvate.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/topdirs.cpp [ 86%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o -MF CMakeFiles/simd-test.dir/simd4_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_math.cpp [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/gmxpreprocess-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxpreprocess-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 86%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_vector_operations.cpp [ 86%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/simd-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/simd-test.dir/base.cpp.o" "CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o" "CMakeFiles/simd-test.dir/scalar.cpp.o" "CMakeFiles/simd-test.dir/scalar_util.cpp.o" "CMakeFiles/simd-test.dir/scalar_math.cpp.o" "CMakeFiles/simd-test.dir/simd.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o" "CMakeFiles/simd-test.dir/simd_integer.cpp.o" "CMakeFiles/simd-test.dir/simd_math.cpp.o" "CMakeFiles/simd-test.dir/simd_memory.cpp.o" "CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/simd4.cpp.o" "CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd4_math.cpp.o" "CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/simd-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In function 'generateTestPoints': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In member function 'compareSimdMathFunction.constprop': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:309:87: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 309 | std::vector testPoints = generateTestPoints(compareSettings.range, s_nPoints); | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Built target simd-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Built target gmxana-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Built target pdb2gmx1-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 86%] Linking CXX executable ../../../../bin/pdb2gmx2-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx2-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx2-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/pdb2gmx3-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx3-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx3-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Built target gmxpreprocess-test /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o -MF CMakeFiles/correlations-test.dir/autocorr.cpp.o.d -o CMakeFiles/correlations-test.dir/autocorr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/autocorr.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -MF CMakeFiles/correlations-test.dir/correlationdataset.cpp.o.d -o CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/correlationdataset.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o -MF CMakeFiles/correlations-test.dir/expfit.cpp.o.d -o CMakeFiles/correlations-test.dir/expfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/expfit.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -MF CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o.d -o CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/correlations-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/correlations-test.dir/autocorr.cpp.o" "CMakeFiles/correlations-test.dir/correlationdataset.cpp.o" "CMakeFiles/correlations-test.dir/expfit.cpp.o" "CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o" "CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/correlations-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Built target pdb2gmx2-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/datatest.cpp [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228063].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228064].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_dataStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:73:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237615].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:35: note: '' declared here 579 | EXPECT_CALL(*this, dataStarted(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237620].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:40: note: '' declared here 583 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237628].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:47: note: '' declared here 589 | EXPECT_CALL(*this, pointsAdded(_)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237636].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:41: note: '' declared here 593 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238074].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:40: note: '' declared here 617 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238109].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:43: note: '' declared here 621 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238382].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:41: note: '' declared here 623 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Built target pdb2gmx3-test /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/builder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/builder.cpp.o -MF CMakeFiles/coordinateio-test.dir/builder.cpp.o.d -o CMakeFiles/coordinateio-test.dir/builder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/builder.cpp In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237552].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:44: note: '' declared here 551 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237570].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:47: note: '' declared here 557 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237575].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:45: note: '' declared here 559 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o -MF CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o.d -o CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/outputadaptercontainer.cpp [ 86%] Linking CXX static library ../../../../lib/libanalysisdata-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -P CMakeFiles/analysisdata-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libanalysisdata-test-shared.a "CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 86%] Built target correlations-test /usr/bin/ranlib ../../../../lib/libanalysisdata-test-shared.a /usr/bin/gmake -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/energyanalysis/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/energyanalysis/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f 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-I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o -MF CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o.d -o CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/energyanalysis/tests/legacyenergy.cpp [ 86%] Built target analysisdata-test-shared /usr/bin/gmake -f src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build.make src/gromacs/tools/tests/CMakeFiles/tool-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/dump.cpp [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o -MF CMakeFiles/coordinateio-test.dir/requirements.cpp.o.d -o CMakeFiles/coordinateio-test.dir/requirements.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/requirements.cpp [ 86%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" 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src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/energyanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/energyanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/energyanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o" "CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/energyanalysis-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 86%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o -MF CMakeFiles/tool-test.dir/report_methods.cpp.o.d -o CMakeFiles/tool-test.dir/report_methods.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/report_methods.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o -MF CMakeFiles/coordinateio-test.dir/setatoms.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setatoms.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setatoms.cpp [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setbothtime.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -MF CMakeFiles/coordinateio-test.dir/settimestep.cpp.o.d -o CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/settimestep.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o -MF CMakeFiles/tool-test.dir/convert-tpr.cpp.o.d -o CMakeFiles/tool-test.dir/convert-tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/convert-tpr.cpp [ 88%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/tool-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tool-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o -MF CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcdensitymap.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -MF CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcdensitymapheader.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o -MF CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o.d -o CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/fileioxdrserializer.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o -MF CMakeFiles/fileio-test.dir/tngio.cpp.o.d -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/tngio.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o -MF CMakeFiles/fileio-test.dir/xvgio.cpp.o.d -o CMakeFiles/fileio-test.dir/xvgio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/xvgio.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 89%] Linking CXX executable ../../../../bin/fileio-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fileio-test.dir/checkpoint.cpp.o" "CMakeFiles/fileio-test.dir/confio.cpp.o" "CMakeFiles/fileio-test.dir/filemd5.cpp.o" "CMakeFiles/fileio-test.dir/mrcserializer.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o" "CMakeFiles/fileio-test.dir/readinp.cpp.o" "CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o" "CMakeFiles/fileio-test.dir/tngio.cpp.o" "CMakeFiles/fileio-test.dir/xvgio.cpp.o" "CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fileio-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 89%] Built target tool-test /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/CMakeFiles/selection-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 89%] Built target coordinateio-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/indexutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/indexutil.cpp.o -MF CMakeFiles/selection-test.dir/indexutil.cpp.o.d -o CMakeFiles/selection-test.dir/indexutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/indexutil.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o -MF CMakeFiles/selection-test.dir/nbsearch.cpp.o.d -o CMakeFiles/selection-test.dir/nbsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/nbsearch.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o -MF CMakeFiles/selection-test.dir/poscalc.cpp.o.d -o CMakeFiles/selection-test.dir/poscalc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/poscalc.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o -MF CMakeFiles/selection-test.dir/selectioncollection.cpp.o.d -o CMakeFiles/selection-test.dir/selectioncollection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectioncollection.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o -MF CMakeFiles/selection-test.dir/selectionoption.cpp.o.d -o CMakeFiles/selection-test.dir/selectionoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectionoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 89%] Built target fileio-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd 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/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o -MF CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/compressed_x_output.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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-Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/selection-test.dir/indexutil.cpp.o" "CMakeFiles/selection-test.dir/nbsearch.cpp.o" "CMakeFiles/selection-test.dir/poscalc.cpp.o" "CMakeFiles/selection-test.dir/selectioncollection.cpp.o" "CMakeFiles/selection-test.dir/selectionoption.cpp.o" "CMakeFiles/selection-test.dir/toputils.cpp.o" "CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/selection-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY 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src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o" "CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o" "CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o" "CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o" "CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-output-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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'/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o -MF CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/checkpoint.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-modules-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-modules-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-modules-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/exactcontinuation.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o -MF CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/initialconstraints.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/termination.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/termination.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-io-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-io-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o" "CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o" "CMakeFiles/mdrun-io-test.dir/grompp.cpp.o" "CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o" "CMakeFiles/mdrun-io-test.dir/termination.cpp.o" "CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-io-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 92%] Built target selection-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -MF CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o.d -o CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multiple_time_stepping.cpp [ 92%] Building CXX object 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-fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -MF CMakeFiles/mdrun-test.dir/swapcoords.cpp.o.d -o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/swapcoords.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -MF CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o.d -o CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tabulated_bonded_interactions.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/freezegroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/freezegroups.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o -MF CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o.d -o CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/constantacceleration.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o" "CMakeFiles/mdrun-test.dir/swapcoords.cpp.o" "CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o" "CMakeFiles/mdrun-test.dir/freezegroups.cpp.o" "CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o" "CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 92%] Built target mdrun-modules-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o -MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/ewaldsurfaceterm.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 92%] Built target mdrun-output-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o -MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/orires.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-single-rank-algorithms-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-single-rank-algorithms-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-single-rank-algorithms-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simple_mdrun.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 93%] Built target mdrun-io-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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/usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include 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../../../../bin/mdrun-tpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 94%] Built target mdrun-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a 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Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 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/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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"CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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"CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 94%] Built target mdrun-mpi-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 94%] Built target mdrun-multisim-replex-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange_equivalence.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-equivalence-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-equivalence-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 95%] Built target mdrun-multisim-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-mpi-pme-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-pme-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o" "CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-pme-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 95%] Built target mdrun-multisim-replex-equivalence-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_basic.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-basic-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-basic-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-basic-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 95%] Built target mdrun-mpi-pme-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_coupling.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-coupling-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-coupling-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 95%] Built target mdrun-mpi-coordination-basic-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make 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CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_constraints.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-constraints-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-constraints-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Built target mdrun-mpi-coordination-coupling-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-fep-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-fep-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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/usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Built target mdrun-mpi-coordination-constraints-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory 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-I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -MF CMakeFiles/mdrun-pull-test.dir/pull.cpp.o.d -o CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pull.cpp [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-pull-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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/usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Built target mdrun-fep-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o -MF CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o.d -o CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simulator.cpp [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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-o CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-simulator-comparison-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-simulator-comparison-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o" "CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-simulator-comparison-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Built target mdrun-pull-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/virtualsites.cpp [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-vsites-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-vsites-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o" "CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-vsites-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Built target mdrun-simulator-comparison-test /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 96%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255580].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255581].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256649].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256650].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256653].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:34: note: '' declared here 140 | EXPECT_CALL(topic1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256656].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:32: note: '' declared here 141 | EXPECT_CALL(sub1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256659].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:32: note: '' declared here 142 | EXPECT_CALL(sub2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256662].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:32: note: '' declared here 143 | EXPECT_CALL(sub3, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256665].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:34: note: '' declared here 144 | EXPECT_CALL(topic2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.254599].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:33: note: '' declared here 92 | EXPECT_CALL(topic, writeHelp(_)); | ^ [ 96%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243854].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:32: note: '' declared here 116 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243700].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:32: note: '' declared here 101 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.242871].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:32: note: '' declared here 86 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240024].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:27: note: '' declared here 71 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240768].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240769].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244202].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:27: note: '' declared here 148 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244205].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244206].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244046].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:31: note: '' declared here 131 | EXPECT_CALL(mod, writeHelp(_)); | ^ [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:106:5, inlined from 'gmx::test::MockOptionsModule::MockOptionsModule()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249346].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockOptionsModule::MockOptionsModule()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:24: note: '' declared here 113 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249218].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:24: note: '' declared here 89 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249224].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:29: note: '' declared here 90 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockModule::checkHelpContext)); | ^ [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineparser.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o -MF CMakeFiles/commandline-test.dir/filenm.cpp.o.d -o CMakeFiles/commandline-test.dir/filenm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/filenm.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o -MF CMakeFiles/commandline-test.dir/pargs.cpp.o.d -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Linking CXX executable ../../../../bin/commandline-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o" "CMakeFiles/commandline-test.dir/filenm.cpp.o" "CMakeFiles/commandline-test.dir/pargs.cpp.o" "CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/commandline-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 97%] Built target commandline-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 97%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -MF CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity.cpp [ 97%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/mdrunutility-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o" "CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 98%] Built target mdrunutility-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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/usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity_mpi.cpp [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/mdrunutility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o" "CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build 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gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 98%] Built target mdrun-vsites-test /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/moduletest.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/angle.cpp [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -MF CMakeFiles/analysisdata-test.dir/arraydata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/arraydata.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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-DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/average.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/convert_trj.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [ 98%] Built target mdrunutility-mpi-test [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/extract_cluster.cpp [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o -MF CMakeFiles/analysisdata-test.dir/histogram.cpp.o.d -o CMakeFiles/analysisdata-test.dir/histogram.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/histogram.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/freevolume.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/msd.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/pairdist.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280783].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280784].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.284025].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.284026].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/rdf.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/sasa.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/select.cpp [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -MF CMakeFiles/analysisdata-test.dir/lifetime.cpp.o.d -o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/lifetime.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && 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CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/topologyinformation.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/trajectory.cpp [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/unionfind.cpp [100%] Linking CXX executable ../../../../bin/analysisdata-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o" "CMakeFiles/analysisdata-test.dir/arraydata.cpp.o" "CMakeFiles/analysisdata-test.dir/average.cpp.o" "CMakeFiles/analysisdata-test.dir/histogram.cpp.o" "CMakeFiles/analysisdata-test.dir/lifetime.cpp.o" "CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/analysisdata-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [100%] Linking CXX executable ../../../../bin/trajectoryanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/trajectoryanalysis-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target analysisdata-test /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target trajectoryanalysis-test /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles/tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target tests /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Running all tests except physical validation /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build Start 1: TestUtilsUnitTests 1/73 Test #1: TestUtilsUnitTests ............................. Passed 0.44 sec Start 2: TestUtilsMpiUnitTests 2/73 Test #2: TestUtilsMpiUnitTests .......................... Passed 0.31 sec Start 3: UtilityUnitTests 3/73 Test #3: UtilityUnitTests ............................... Passed 0.24 sec Start 4: UtilityMpiUnitTests 4/73 Test #4: UtilityMpiUnitTests ............................ Passed 0.17 sec Start 5: GmxlibTests 5/73 Test #5: GmxlibTests .................................... Passed 0.20 sec Start 6: MdlibUnitTest 6/73 Test #6: MdlibUnitTest .................................. Passed 0.25 sec Start 7: AwhTest 7/73 Test #7: AwhTest ........................................ Passed 0.17 sec Start 8: DensityFittingAppliedForcesUnitTest 8/73 Test #8: DensityFittingAppliedForcesUnitTest ............ Passed 0.12 sec Start 9: QMMMAppliedForcesUnitTest 9/73 Test #9: QMMMAppliedForcesUnitTest ...................... Passed 0.22 sec Start 10: AppliedForcesUnitTest 10/73 Test #10: AppliedForcesUnitTest .......................... Passed 0.07 sec Start 11: ListedForcesTest 11/73 Test #11: ListedForcesTest ............................... Passed 0.19 sec Start 12: NbnxmTests 12/73 Test #12: NbnxmTests ..................................... Passed 0.11 sec Start 13: CommandLineUnitTests 13/73 Test #13: CommandLineUnitTests ........................... Passed 0.08 sec Start 14: DomDecTests 14/73 Test #14: DomDecTests .................................... Passed 0.11 sec Start 15: DomDecMpiTests 15/73 Test #15: DomDecMpiTests ................................. Passed 0.30 sec Start 16: EwaldUnitTests 16/73 Test #16: EwaldUnitTests ................................. Passed 0.36 sec Start 17: FFTUnitTests 17/73 Test #17: FFTUnitTests ................................... Passed 0.16 sec Start 18: GpuUtilsUnitTests 18/73 Test #18: GpuUtilsUnitTests .............................. Passed 0.14 sec Start 19: HardwareUnitTests 19/73 Test #19: HardwareUnitTests .............................. Passed 0.20 sec Start 20: MathUnitTests 20/73 Test #20: MathUnitTests .................................. Passed 0.23 sec Start 21: MdrunUtilityUnitTests 21/73 Test #21: MdrunUtilityUnitTests .......................... Passed 0.07 sec Start 22: MdrunUtilityMpiUnitTests 22/73 Test #22: MdrunUtilityMpiUnitTests ....................... Passed 0.09 sec Start 23: MDSpanTests 23/73 Test #23: MDSpanTests .................................... Passed 0.07 sec Start 24: MdtypesUnitTest 24/73 Test #24: MdtypesUnitTest ................................ Passed 0.16 sec Start 25: OnlineHelpUnitTests 25/73 Test #25: OnlineHelpUnitTests ............................ Passed 0.12 sec Start 26: OptionsUnitTests 26/73 Test #26: OptionsUnitTests ............................... Passed 0.18 sec Start 27: PbcutilUnitTest 27/73 Test #27: PbcutilUnitTest ................................ Passed 0.14 sec Start 28: RandomUnitTests 28/73 Test #28: RandomUnitTests ................................ Passed 0.12 sec Start 29: RestraintTests 29/73 Test #29: RestraintTests ................................. Passed 0.10 sec Start 30: TableUnitTests 30/73 Test #30: TableUnitTests ................................. Passed 0.12 sec Start 31: TaskAssignmentUnitTests 31/73 Test #31: TaskAssignmentUnitTests ........................ Passed 0.10 sec Start 32: GmxTimingTests 32/73 Test #32: GmxTimingTests ................................. Passed 0.11 sec Start 33: TopologyTest 33/73 Test #33: TopologyTest ................................... Passed 0.12 sec Start 34: PullTest 34/73 Test #34: PullTest ....................................... Passed 0.09 sec Start 35: SimdUnitTests 35/73 Test #35: SimdUnitTests .................................. Passed 0.20 sec Start 36: CompatibilityHelpersTests 36/73 Test #36: CompatibilityHelpersTests ...................... Passed 0.10 sec Start 37: GmxAnaTest 37/73 Test #37: GmxAnaTest ..................................... Passed 0.78 sec Start 38: GmxPreprocessTests 38/73 Test #38: GmxPreprocessTests ............................. Passed 0.90 sec Start 39: Pdb2gmx1Test 39/73 Test #39: Pdb2gmx1Test ................................... Passed 1.17 sec Start 40: Pdb2gmx2Test 40/73 Test #40: Pdb2gmx2Test ................................... Passed 1.31 sec Start 41: Pdb2gmx3Test 41/73 Test #41: Pdb2gmx3Test ................................... Passed 3.12 sec Start 42: CorrelationsTest 42/73 Test #42: CorrelationsTest ............................... Passed 0.21 sec Start 43: AnalysisDataUnitTests 43/73 Test #43: AnalysisDataUnitTests .......................... Passed 0.09 sec Start 44: CoordinateIOTests 44/73 Test #44: CoordinateIOTests .............................. Passed 0.23 sec Start 45: TrajectoryAnalysisUnitTests 45/73 Test #45: TrajectoryAnalysisUnitTests .................... Passed 0.62 sec Start 46: EnergyAnalysisUnitTests 46/73 Test #46: EnergyAnalysisUnitTests ........................ Passed 0.18 sec Start 47: ToolUnitTests 47/73 Test #47: ToolUnitTests .................................. Passed 1.40 sec Start 48: FileIOTests 48/73 Test #48: FileIOTests .................................... Passed 0.13 sec Start 49: SelectionUnitTests 49/73 Test #49: SelectionUnitTests ............................. Passed 0.34 sec Start 50: MdrunOutputTests 50/73 Test #50: MdrunOutputTests ............................... Passed 0.19 sec Start 51: MdrunModulesTests 51/73 Test #51: MdrunModulesTests .............................. Passed 0.23 sec Start 52: MdrunIOTests 52/73 Test #52: MdrunIOTests ................................... Passed 0.13 sec Start 53: MdrunTestsOneRank 53/73 Test #53: MdrunTestsOneRank .............................. Passed 0.70 sec Start 54: MdrunTestsTwoRanks 54/73 Test #54: MdrunTestsTwoRanks ............................. Passed 0.75 sec Start 55: MdrunSingleRankAlgorithmsTests 55/73 Test #55: MdrunSingleRankAlgorithmsTests ................. Passed 0.24 sec Start 56: MdrunNonIntegratorTests 56/73 Test #56: MdrunNonIntegratorTests ........................ Passed 0.73 sec Start 57: MdrunTpiTests 57/73 Test #57: MdrunTpiTests .................................. Passed 0.50 sec Start 58: MdrunMpiTests 58/73 Test #58: MdrunMpiTests .................................. Passed 0.79 sec Start 59: MdrunMultiSimTests 59/73 Test #59: MdrunMultiSimTests ............................. Passed 0.22 sec Start 60: MdrunMultiSimReplexTests 60/73 Test #60: MdrunMultiSimReplexTests ....................... Passed 0.22 sec Start 61: MdrunMultiSimReplexEquivalenceTests 61/73 Test #61: MdrunMultiSimReplexEquivalenceTests ............ Passed 2.34 sec Start 62: MdrunMpi1RankPmeTests 62/73 Test #62: MdrunMpi1RankPmeTests .......................... Passed 0.17 sec Start 63: MdrunMpi2RankPmeTests 63/73 Test #63: MdrunMpi2RankPmeTests .......................... Passed 0.28 sec Start 64: MdrunMpiCoordinationBasicTestsOneRank 64/73 Test #64: MdrunMpiCoordinationBasicTestsOneRank .......... Passed 0.08 sec Start 65: MdrunMpiCoordinationBasicTestsTwoRanks 65/73 Test #65: MdrunMpiCoordinationBasicTestsTwoRanks ......... Passed 0.08 sec Start 66: MdrunMpiCoordinationCouplingTestsOneRank 66/73 Test #66: MdrunMpiCoordinationCouplingTestsOneRank ....... Passed 0.08 sec Start 67: MdrunMpiCoordinationCouplingTestsTwoRanks 67/73 Test #67: MdrunMpiCoordinationCouplingTestsTwoRanks ...... Passed 0.08 sec Start 68: MdrunMpiCoordinationConstraintsTestsOneRank 68/73 Test #68: MdrunMpiCoordinationConstraintsTestsOneRank .... Passed 0.08 sec Start 69: MdrunMpiCoordinationConstraintsTestsTwoRanks 69/73 Test #69: MdrunMpiCoordinationConstraintsTestsTwoRanks ... Passed 0.08 sec Start 70: MdrunFEPTests 70/73 Test #70: MdrunFEPTests .................................. Passed 0.08 sec Start 71: MdrunPullTests 71/73 Test #71: MdrunPullTests ................................. Passed 0.92 sec Start 72: MdrunSimulatorComparison 72/73 Test #72: MdrunSimulatorComparison ....................... Passed 0.08 sec Start 73: MdrunVirtualSiteTests 73/73 Test #73: MdrunVirtualSiteTests .......................... Passed 0.21 sec 100% tests passed, 0 tests failed out of 73 Label Time Summary: GTest = 25.71 sec*proc (73 tests) IntegrationTest = 9.56 sec*proc (19 tests) MpiTest = 7.04 sec*proc (19 tests) QuickGpuTest = 4.65 sec*proc (15 tests) SlowTest = 9.19 sec*proc (13 tests) UnitTest = 6.97 sec*proc (41 tests) Total Test time (real) = 25.83 sec gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target run-ctest-nophys /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/tests /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Some tests not available cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target missing-tests-notice /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles/check.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/check.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' [100%] Built target check gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build/CMakeFiles 0 gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich/redhat-linux-build' + [[ mpich = openmpi ]] + popd ~/build/BUILD/gromacs-2022.3 + test -n mpich + module unload mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for mpi in '' mpich openmpi + test -n openmpi + module load mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + pushd openmpi ~/build/BUILD/gromacs-2022.3/openmpi ~/build/BUILD/gromacs-2022.3 + [[ openmpi = openmpi ]] + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + /usr/bin/cmake --build redhat-linux-build -j4 --verbose --target check Change Dir: '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 check /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/gmake -f CMakeFiles/Makefile2 check gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles 89 /usr/bin/gmake -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/gmake -f src/external/googletest/googletest/CMakeFiles/gtest.dir/build.make src/external/googletest/googletest/CMakeFiles/gtest.dir/depend /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/build.make src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/external/googletest/googletest /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/external/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/clFFT/src /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" Dependencies file "src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/external/googletest/googletest/CMakeFiles/gtest.dir/build.make src/external/googletest/googletest/CMakeFiles/gtest.dir/build Dependencies file "src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' Consolidate compiler generated dependencies of target mdrun_objlib Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/accessors.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/action.transpose.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/enqueue.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". [ 0%] Building CXX object src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/external/googletest/googletest && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wall -Wshadow -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=1 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/src/gtest-all.cc Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/fft_binary_lookup.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/library/md5sum.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/clFFT-build/CMakeFiles/clFFT.dir/compiler_depend.internal". 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[ 1%] Generating release version information cd /builddir/build/BUILD/gromacs-2022.3 && /usr/bin/cmake -D PYTHON_EXECUTABLE=/usr/bin/python3.12 -D PROJECT_VERSION=2022.3-Fedora39 -D PROJECT_SOURCE_DIR=/builddir/build/BUILD/gromacs-2022.3 -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake [ 2%] Built target clFFT /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend Consolidate compiler generated dependencies of target modularsimulator gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". 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Consolidate compiler generated dependencies of target thread_mpi gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/CMakeFiles/thread_mpi.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 2%] Built target release-version-info /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend [ 4%] Built target modularsimulator /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake "--color=" [ 4%] Built target thread_mpi gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". 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Consolidate compiler generated dependencies of target libgromacs gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 64%] Built target libgromacs [ 64%] Linking CXX static library ../../../../lib/libgtest.a cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -P CMakeFiles/gtest.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/bin/ar qc 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o -MF CMakeFiles/testutils.dir/refdata.cpp.o.d -o CMakeFiles/testutils.dir/refdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::(anonymous namespace)::MockLogTarget::gmock_writeEntry(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:62:5, inlined from 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.198941].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp: In member function 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:35: note: '' declared here 113 | EXPECT_CALL(target, writeEntry(testing::_)).Times(0); | ^ [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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-grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o -MF CMakeFiles/testutils.dir/refdata_xml.cpp.o.d -o CMakeFiles/testutils.dir/refdata_xml.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata_xml.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:48: In member function 'testing::internal::MatcherBase, std::allocator >*>::MatcherBase(testing::internal::MatcherBase, std::allocator >*> const&)', inlined from 'testing::Matcher, std::allocator >*>::Matcher(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextInputStream::gmock_readLine(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:71:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211524].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:43: note: '' declared here 90 | EXPECT_CALL(inputStream_, readLine(_)).WillRepeatedly(Invoke(this, &Impl::readInputLine)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextOutputStream::gmock_write(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:78:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211531].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:41: note: '' declared here 92 | EXPECT_CALL(outputStream_, write(_)).WillRepeatedly(Invoke(this, &Impl::addOutput)); | ^ [ 65%] Building CXX object src/testutils/CMakeFiles/testutils.dir/simulationdatabase.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -MF CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o.d -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 66%] Linking CXX executable ../../../bin/testutils-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask32.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 68%] Built target testutils-mpi-test /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 68%] Building CXX object src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxlib/nonbonded/tests\" 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../../bin/nonbonded-fep-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nonbonded-fep-test.dir/link.txt --verbose=1 [ 68%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/defaultinitializationallocator.cpp /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o" "CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/nonbonded-fep-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 68%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -MF CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o.d -o CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/fixedcapacityvector.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 68%] Built target utility-mpi-test /usr/bin/gmake -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -MF CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o.d -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/calc_verletbuf.cpp [ 68%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calcvir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calcvir.cpp.o -MF CMakeFiles/mdlib-test.dir/calcvir.cpp.o.d -o CMakeFiles/mdlib-test.dir/calcvir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/calcvir.cpp [ 68%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o -MF CMakeFiles/mdlib-test.dir/constr.cpp.o.d -o CMakeFiles/mdlib-test.dir/constr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constr.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 69%] Built target testutils-test /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake "--color=" [ 69%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreeserializer.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 69%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o -MF CMakeFiles/awh-test.dir/awh_setup.cpp.o.d -o CMakeFiles/awh-test.dir/awh_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/awh_setup.cpp [ 69%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreetransform.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o -MF CMakeFiles/awh-test.dir/bias.cpp.o.d -o CMakeFiles/awh-test.dir/bias.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o -MF CMakeFiles/mdlib-test.dir/ebin.cpp.o.d -o CMakeFiles/mdlib-test.dir/ebin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/ebin.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o -MF CMakeFiles/awh-test.dir/biasgrid.cpp.o.d -o CMakeFiles/awh-test.dir/biasgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasgrid.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -MF CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o.d -o CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energydrifttracker.cpp [ 70%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o -MF CMakeFiles/utility-test.dir/logger.cpp.o.d -o CMakeFiles/utility-test.dir/logger.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/logger.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -MF CMakeFiles/mdlib-test.dir/energyoutput.cpp.o.d -o CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energyoutput.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o -MF CMakeFiles/awh-test.dir/biassharing.cpp.o.d -o CMakeFiles/awh-test.dir/biassharing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biassharing.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -MF CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o.d -o CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/mdmodulesnotifier.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o -MF CMakeFiles/awh-test.dir/biasstate.cpp.o.d -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasstate.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o -MF CMakeFiles/utility-test.dir/message_string_collector.cpp.o.d -o CMakeFiles/utility-test.dir/message_string_collector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/message_string_collector.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o -MF CMakeFiles/utility-test.dir/path.cpp.o.d -o CMakeFiles/utility-test.dir/path.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/path.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -MF CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o.d -o CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias_fep_lambda_state.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -MF CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o.d -o CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -MF CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o.d -o CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/freeenergyparameters.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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-fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o -MF CMakeFiles/utility-test.dir/strconvert.cpp.o.d -o CMakeFiles/utility-test.dir/strconvert.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp [ 71%] Linking CXX executable ../../../../../bin/awh-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/awh-test.dir/awh_setup.cpp.o" "CMakeFiles/awh-test.dir/bias.cpp.o" "CMakeFiles/awh-test.dir/biasgrid.cpp.o" "CMakeFiles/awh-test.dir/biassharing.cpp.o" "CMakeFiles/awh-test.dir/biasstate.cpp.o" "CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o" "CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/awh-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp:45: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrog.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrog.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -MF CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o.d -o CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringtoenumvalueconverter.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestdata.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o -MF CMakeFiles/utility-test.dir/stringutil.cpp.o.d -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringutil.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o -MF CMakeFiles/mdlib-test.dir/settle.cpp.o.d -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settle.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o -MF CMakeFiles/utility-test.dir/textwriter.cpp.o.d -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textwriter.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o -MF CMakeFiles/utility-test.dir/typetraits.cpp.o.d -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/typetraits.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroups.cpp [ 73%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Linking CXX executable ../../../../bin/utility-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-test.dir/alignedallocator.cpp.o" "CMakeFiles/utility-test.dir/arrayref.cpp.o" "CMakeFiles/utility-test.dir/bitmask32.cpp.o" "CMakeFiles/utility-test.dir/bitmask64.cpp.o" "CMakeFiles/utility-test.dir/bitmask128.cpp.o" "CMakeFiles/utility-test.dir/cstringutil.cpp.o" "CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o" "CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o" "CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o" "CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o" "CMakeFiles/utility-test.dir/listoflists.cpp.o" "CMakeFiles/utility-test.dir/logger.cpp.o" "CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o" "CMakeFiles/utility-test.dir/message_string_collector.cpp.o" "CMakeFiles/utility-test.dir/path.cpp.o" "CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o" "CMakeFiles/utility-test.dir/range.cpp.o" "CMakeFiles/utility-test.dir/strconvert.cpp.o" "CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o" "CMakeFiles/utility-test.dir/stringutil.cpp.o" "CMakeFiles/utility-test.dir/template_mp.cpp.o" "CMakeFiles/utility-test.dir/textreader.cpp.o" "CMakeFiles/utility-test.dir/textwriter.cpp.o" "CMakeFiles/utility-test.dir/typetraits.cpp.o" "CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroupscog.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 73%] Built target awh-test /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 73%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o.d -o 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -MF CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o.d -o CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/wholemoleculetransform.cpp [ 73%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingamplitudelookup.cpp [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 74%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingforceprovider.cpp [ 74%] Linking CXX executable ../../../../bin/mdlib-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o" "CMakeFiles/mdlib-test.dir/calcvir.cpp.o" "CMakeFiles/mdlib-test.dir/constr.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/ebin.cpp.o" "CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o" "CMakeFiles/mdlib-test.dir/energyoutput.cpp.o" "CMakeFiles/mdlib-test.dir/expanded.cpp.o" "CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrog.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/settle.cpp.o" "CMakeFiles/mdlib-test.dir/settletestdata.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/shake.cpp.o" "CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o" "CMakeFiles/mdlib-test.dir/updategroups.cpp.o" "CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o" "CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdlib-test -Wl,-rpath,/usr/lib64/openmpi/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 74%] Built target nonbonded-fep-test /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmminputgenerator.cpp [ 74%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmtopologypreprocessor.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmoptions.cpp [ 74%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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CMakeFiles/density_fitting_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/density_fitting_applied_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o cd 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src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmforceprovider.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmm.cpp [ 74%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../../bin/qmmm_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/qmmm_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/qmmm_applied_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target utility-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target density_fitting_applied_forces-test /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -MF CMakeFiles/applied_forces-test.dir/electricfield.cpp.o.d -o CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests/electricfield.cpp [ 75%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/applied_forces-test.dir/electricfield.cpp.o" "CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/applied_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target mdlib-test /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o -MF CMakeFiles/listed_forces-test.dir/bonded.cpp.o.d -o CMakeFiles/listed_forces-test.dir/bonded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/bonded.cpp [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o -MF CMakeFiles/listed_forces-test.dir/pairs.cpp.o.d -o CMakeFiles/listed_forces-test.dir/pairs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/pairs.cpp [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -MF CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o.d -o CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/position_restraints.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target applied_forces-test /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -MF CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o.d -o CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/atomdata.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/kernel_common.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/nbnxm-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nbnxm-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o" "CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/nbnxm-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp [ 75%] Linking CXX executable ../../../../bin/listed_forces-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/listed_forces-test.dir/bonded.cpp.o" "CMakeFiles/listed_forces-test.dir/pairs.cpp.o" "CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o" "CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/listed_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.207740].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp: In member function 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:33: note: '' declared here 77 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockHelpTopic::writeHelpBase)); | ^ [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target qmmm_applied_forces-test /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o -MF CMakeFiles/domdec-test.dir/hashedmap.cpp.o.d -o CMakeFiles/domdec-test.dir/hashedmap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/hashedmap.cpp [ 75%] Linking CXX static library ../../../../lib/libonlinehelp-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -P CMakeFiles/onlinehelp-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libonlinehelp-test-shared.a "CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o" "CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libonlinehelp-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target onlinehelp-test-shared /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/domdec_internal.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp:61: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -MF CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o.d -o CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/localatomsetmanager.cpp [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/domdec-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-test.dir/hashedmap.cpp.o" "CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o" "CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 75%] Linking CXX executable ../../../../bin/domdec-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o" "CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-mpi-test -Wl,-rpath,/usr/lib64/openmpi/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target nbnxm-test /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp:56: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -MF CMakeFiles/ewald-test.dir/pmegathertest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target domdec-test /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o -MF CMakeFiles/fft-test.dir/fft.cpp.o.d -o CMakeFiles/fft-test.dir/fft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests/fft.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/gpu_3dfft.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests/fft.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp:57: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target domdec-mpi-test /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/clfftinitializer.cpp [ 75%] Linking CXX executable ../../../../bin/fft-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fft-test.dir/fft.cpp.o" "CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fft-test -Wl,-rpath,/usr/lib64/openmpi/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_availability.cpp [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Built target listed_forces-test /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 75%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -MF CMakeFiles/hardware-test.dir/cpuinfo.cpp.o.d -o CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/cpuinfo.cpp [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_stream_manager.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp:58: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 75%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/hardwaretopology.cpp [ 76%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -MF CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/hostallocator.cpp [ 76%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/mockhardwaretopology.cpp [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -MF CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o.d -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp:44: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 76%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o -MF CMakeFiles/ewald-test.dir/pme.cpp.o.d -o CMakeFiles/ewald-test.dir/pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.h:50, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 77%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o -MF CMakeFiles/hardware-test.dir/device_management.cpp.o.d -o CMakeFiles/hardware-test.dir/device_management.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp [ 78%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -MF CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/pinnedmemorychecker.cpp [ 78%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o -MF CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers_ocl.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/device_information.h:54, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers_ocl.cpp:42: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 78%] Linking CXX executable ../../../../bin/ewald-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o" "CMakeFiles/ewald-test.dir/pmegathertest.cpp.o" "CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o" "CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o" "CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o" "CMakeFiles/ewald-test.dir/pme.cpp.o" "CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/ewald-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 78%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp [ 78%] Linking CXX executable ../../../../bin/hardware-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/hardware-test.dir/cpuinfo.cpp.o" "CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/device_management.cpp.o" "CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/hardware-test -Wl,-rpath,/usr/lib64/openmpi/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_context.h:55, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp:51: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 78%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_event_ocl.h:44, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/device_event.h:117, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gpueventsynchronizer.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp:45: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 78%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Linking CXX executable ../../../../bin/gpu_utils-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o" "CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o" "CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o" "CMakeFiles/gpu_utils-test.dir/devicetransfers_ocl.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o" "CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o" "CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o" "CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gpu_utils-test -Wl,-rpath,/usr/lib64/openmpi/lib /usr/lib64/libOpenCL.so ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 78%] Built target hardware-test /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 78%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -MF CMakeFiles/math-test.dir/coordinatetransformation.cpp.o.d -o CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/coordinatetransformation.cpp [ 78%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o -MF CMakeFiles/math-test.dir/densityfit.cpp.o.d -o CMakeFiles/math-test.dir/densityfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfit.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 78%] Built target fft-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 78%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:36: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockThreadAffinityAccess::gmock_setCurrentThreadAffinityToCore(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:70:5, inlined from 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.226902].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp: In member function 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:50: note: '' declared here 59 | ON_CALL(*this, setCurrentThreadAffinityToCore(_)).WillByDefault(Return(true)); | ^ [ 78%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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"CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o" "CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libmdrunutility-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 78%] Built target mdrunutility-test-shared /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdspan/tests 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -MF CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o.d -o CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/accessor_policy.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ 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src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o -MF CMakeFiles/mdspan-test.dir/mdspan.cpp.o.d -o CMakeFiles/mdspan-test.dir/mdspan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/mdspan.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o -MF CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o.d -o CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/checkpointdata.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o -MF CMakeFiles/math-test.dir/densityfittingforce.cpp.o.d -o CMakeFiles/math-test.dir/densityfittingforce.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfittingforce.cpp [ 79%] Linking CXX executable ../../../../bin/mdspan-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdspan-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o" "CMakeFiles/mdspan-test.dir/extents.cpp.o" "CMakeFiles/mdspan-test.dir/extensions.cpp.o" "CMakeFiles/mdspan-test.dir/layouts.cpp.o" "CMakeFiles/mdspan-test.dir/mdspan.cpp.o" "CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdspan-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a 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src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o -MF CMakeFiles/math-test.dir/multidimarray.cpp.o.d -o CMakeFiles/math-test.dir/multidimarray.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/multidimarray.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 79%] Built target ewald-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 79%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpformat.cpp [ 79%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -MF CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o.d -o CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/forcebuffers.cpp [ 79%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp [ 79%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -MF CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o.d -o CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/multipletimestepping.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o -MF CMakeFiles/math-test.dir/neldermead.cpp.o.d -o CMakeFiles/math-test.dir/neldermead.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/neldermead.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:47: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.220014].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:36: note: '' declared here 106 | EXPECT_CALL(firstSub, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.219159].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:38: note: '' declared here 95 | EXPECT_CALL(rootTopic_, writeHelp(_)); | ^ [ 79%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpwritercontext.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o -MF CMakeFiles/math-test.dir/optimization.cpp.o.d -o CMakeFiles/math-test.dir/optimization.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/optimization.cpp [ 79%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o -MF CMakeFiles/math-test.dir/paddedvector.cpp.o.d -o CMakeFiles/math-test.dir/paddedvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/paddedvector.cpp [ 79%] Linking CXX executable ../../../../bin/onlinehelp-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o" "CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/onlinehelp-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a [ 79%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Linking CXX executable ../../../../bin/mdtypes-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdtypes-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o" "CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o" "CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o" "CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o" "CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdtypes-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 80%] Built target mdspan-test /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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-DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -MF CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o.d -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:49: In member function 'testing::internal::MatcherBase, std::allocator > const&>::MatcherBase(testing::internal::MatcherBase, std::allocator > const&> const&)', inlined from 'testing::Matcher, std::allocator > const&>::Matcher(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:514:18, inlined from '(anonymous namespace)::MockOptionStorage::gmock_convertValue(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:113:5, inlined from '__ct ' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:5, inlined from '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:138:43: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.394537].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp: In member function '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:32: note: '' declared here 147 | ON_CALL(*this, convertValue(_)).WillByDefault(WithArg<0>(Invoke(this, &MockOptionStorage::addValue))); | ^ [ 80%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o cd 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o -MF CMakeFiles/math-test.dir/vectypes.cpp.o.d -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/vectypes.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 80%] Built target onlinehelp-test /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build gmake[3]: Entering directory 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o -MF CMakeFiles/options-test.dir/option.cpp.o.d -o CMakeFiles/options-test.dir/option.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/option.cpp [ 82%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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CMakeFiles/options-test.dir/optionsassigner.cpp.o.d -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/optionsassigner.cpp [ 82%] Linking CXX executable ../../../../bin/math-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o" "CMakeFiles/math-test.dir/coordinatetransformation.cpp.o" "CMakeFiles/math-test.dir/densityfit.cpp.o" "CMakeFiles/math-test.dir/dofit.cpp.o" "CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o" "CMakeFiles/math-test.dir/functions.cpp.o" "CMakeFiles/math-test.dir/gausstransform.cpp.o" "CMakeFiles/math-test.dir/densityfittingforce.cpp.o" "CMakeFiles/math-test.dir/invertmatrix.cpp.o" "CMakeFiles/math-test.dir/matrix.cpp.o" "CMakeFiles/math-test.dir/multidimarray.cpp.o" "CMakeFiles/math-test.dir/neldermead.cpp.o" "CMakeFiles/math-test.dir/optimization.cpp.o" "CMakeFiles/math-test.dir/paddedvector.cpp.o" "CMakeFiles/math-test.dir/vectypes.cpp.o" "CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/math-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 82%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o -MF CMakeFiles/pbcutil-test.dir/mshift.cpp.o.d -o CMakeFiles/pbcutil-test.dir/mshift.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/mshift.cpp [ 82%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbc.cpp [ 82%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/pbcutil-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbcutil-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pbcutil-test.dir/com.cpp.o" "CMakeFiles/pbcutil-test.dir/mshift.cpp.o" "CMakeFiles/pbcutil-test.dir/pbc.cpp.o" "CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o" "CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pbcutil-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 82%] Built target mdtypes-test /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o -MF CMakeFiles/options-test.dir/repeatingsection.cpp.o.d -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/repeatingsection.cpp [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects 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-fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o -MF CMakeFiles/random-test.dir/threefry.cpp.o.d -o CMakeFiles/random-test.dir/threefry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/threefry.cpp [ 82%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/options-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o" "CMakeFiles/options-test.dir/filenameoption.cpp.o" "CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o" "CMakeFiles/options-test.dir/option.cpp.o" "CMakeFiles/options-test.dir/optionsassigner.cpp.o" "CMakeFiles/options-test.dir/repeatingsection.cpp.o" "CMakeFiles/options-test.dir/timeunitmanager.cpp.o" "CMakeFiles/options-test.dir/treesupport.cpp.o" "CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/options-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 82%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o cd 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/random-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/random-test.dir/exponentialdistribution.cpp.o" "CMakeFiles/random-test.dir/gammadistribution.cpp.o" "CMakeFiles/random-test.dir/normaldistribution.cpp.o" 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target pbcutil-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 82%] Built target random-test /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory 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../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 83%] Built target math-test /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/taskassignment/tests 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-Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o" "CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/taskassignment-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 83%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tables/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Linking CXX executable ../../../../bin/table-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/table-test.dir/splinetable.cpp.o" "CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/table-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory 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'/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 83%] Built target table-test /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -MF CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o.d -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/bootstrap_loadstore.cpp [ 83%] 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o -MF CMakeFiles/simd-test.dir/scalar.cpp.o.d -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar.cpp [ 83%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/topsort.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o -MF CMakeFiles/simd-test.dir/scalar_util.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_util.cpp [ 83%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/pointers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/compat-test.dir/mp11.cpp.o" "CMakeFiles/compat-test.dir/pointers.cpp.o" "CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/compat-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o -MF CMakeFiles/simd-test.dir/simd.cpp.o.d -o CMakeFiles/simd-test.dir/simd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 83%] Built target pull-test /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxana/tests 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src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_chi.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Linking CXX executable ../../../../bin/gmxana-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxana-test.dir/entropy.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o" "CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxana-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o -MF CMakeFiles/simd-test.dir/simd_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In static member function 'static std::vector > gmx::test::SimdMathTest::generateTestPoints(Range, std::size_t)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^~~~~~~~~~~~ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 83%] Built target compat-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genconf.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_vector_operations.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 84%] Built target topology-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make 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-DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 85%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o -MF CMakeFiles/simd-test.dir/simd4_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_math.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/insert_molecules.cpp [ 86%] Linking CXX executable ../../../../bin/pdb2gmx1-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx1-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx1-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/readir.cpp [ 86%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_vector_operations.cpp [ 86%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/simd-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/simd-test.dir/base.cpp.o" "CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o" "CMakeFiles/simd-test.dir/scalar.cpp.o" "CMakeFiles/simd-test.dir/scalar_util.cpp.o" "CMakeFiles/simd-test.dir/scalar_math.cpp.o" "CMakeFiles/simd-test.dir/simd.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o" "CMakeFiles/simd-test.dir/simd_integer.cpp.o" "CMakeFiles/simd-test.dir/simd_math.cpp.o" "CMakeFiles/simd-test.dir/simd_memory.cpp.o" "CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o" 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/solvate.cpp [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/topdirs.cpp [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/gmxpreprocess-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxpreprocess-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In function 'generateTestPoints': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In member function 'compareSimdMathFunction.constprop': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:309:87: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 309 | std::vector testPoints = generateTestPoints(compareSettings.range, s_nPoints); | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 86%] Built target gmxana-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 86%] Built target simd-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=0 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/pdb2gmx2-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx2-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx2-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=0 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/pdb2gmx3-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx3-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx3-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 86%] Built target pdb2gmx1-test /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/correlationfunctions/tests 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86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o -MF CMakeFiles/correlations-test.dir/expfit.cpp.o.d -o CMakeFiles/correlations-test.dir/expfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/expfit.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ 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CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/correlations-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/correlations-test.dir/autocorr.cpp.o" "CMakeFiles/correlations-test.dir/correlationdataset.cpp.o" "CMakeFiles/correlations-test.dir/expfit.cpp.o" "CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o" "CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/correlations-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 86%] Built target correlations-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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-DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/datatest.cpp [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228063].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228064].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_dataStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:73:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237615].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:35: note: '' declared here 579 | EXPECT_CALL(*this, dataStarted(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237620].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:40: note: '' declared here 583 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237628].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:47: note: '' declared here 589 | EXPECT_CALL(*this, pointsAdded(_)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237636].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:41: note: '' declared here 593 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238074].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:40: note: '' declared here 617 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238109].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:43: note: '' declared here 621 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238382].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:41: note: '' declared here 623 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237552].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:44: note: '' declared here 551 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237570].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:47: note: '' declared here 557 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237575].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:45: note: '' declared here 559 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/angle.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 86%] Built target pdb2gmx3-test /usr/bin/gmake -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/energyanalysis/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/clustsize.cpp [ 86%] Building CXX object src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/energyanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/energyanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/energyanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser 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-MF CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp [ 86%] Linking CXX executable ../../../../bin/energyanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/energyanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/energyanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o" "CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/energyanalysis-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280783].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280784].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.284025].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.284026].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ [ 86%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/convert_trj.cpp [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/distance.cpp [ 87%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/extract_cluster.cpp [ 88%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/freevolume.cpp [ 88%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setbothtime.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/dump.cpp.o -MF CMakeFiles/tool-test.dir/dump.cpp.o.d -o CMakeFiles/tool-test.dir/dump.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/dump.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/sasa.cpp [ 88%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" 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src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/select.cpp [ 88%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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-fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/coordinateio-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/coordinateio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/coordinateio-test.dir/builder.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o" "CMakeFiles/coordinateio-test.dir/requirements.cpp.o" "CMakeFiles/coordinateio-test.dir/setatoms.cpp.o" "CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o" "CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o" "CMakeFiles/coordinateio-test.dir/settimestep.cpp.o" "CMakeFiles/coordinateio-test.dir/testmodule.cpp.o" "CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/coordinateio-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp [ 88%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/tool-test.dir/trjconv.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/trjconv.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/topologyinformation.cpp [ 89%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o -MF CMakeFiles/tool-test.dir/convert-tpr.cpp.o.d -o CMakeFiles/tool-test.dir/convert-tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/convert-tpr.cpp [ 89%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/trajectory.cpp [ 89%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/unionfind.cpp [ 89%] Linking CXX executable ../../../../bin/tool-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tool-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast 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-fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o" 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/usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 89%] Built target energyanalysis-test /usr/bin/gmake -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o -MF CMakeFiles/fileio-test.dir/tngio.cpp.o.d -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/tngio.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o -MF CMakeFiles/fileio-test.dir/xvgio.cpp.o.d -o CMakeFiles/fileio-test.dir/xvgio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/xvgio.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/fileio-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fileio-test.dir/checkpoint.cpp.o" "CMakeFiles/fileio-test.dir/confio.cpp.o" "CMakeFiles/fileio-test.dir/filemd5.cpp.o" "CMakeFiles/fileio-test.dir/mrcserializer.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o" "CMakeFiles/fileio-test.dir/readinp.cpp.o" "CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o" "CMakeFiles/fileio-test.dir/tngio.cpp.o" "CMakeFiles/fileio-test.dir/xvgio.cpp.o" "CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fileio-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 91%] Built target coordinateio-test /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/indexutil.cpp.o -MF CMakeFiles/selection-test.dir/indexutil.cpp.o.d -o CMakeFiles/selection-test.dir/indexutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/indexutil.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 91%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o -MF CMakeFiles/selection-test.dir/nbsearch.cpp.o.d -o CMakeFiles/selection-test.dir/nbsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/nbsearch.cpp [ 91%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" 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src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o -MF CMakeFiles/selection-test.dir/selectioncollection.cpp.o.d -o CMakeFiles/selection-test.dir/selectioncollection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectioncollection.cpp [ 91%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o -MF CMakeFiles/selection-test.dir/selectionoption.cpp.o.d -o CMakeFiles/selection-test.dir/selectionoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectionoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 91%] Built target fileio-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o -MF CMakeFiles/selection-test.dir/toputils.cpp.o.d -o CMakeFiles/selection-test.dir/toputils.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/toputils.cpp [ 91%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o -MF CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/helpwriting.cpp [ 92%] Linking CXX executable ../../../../bin/selection-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/selection-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/selection-test.dir/indexutil.cpp.o" "CMakeFiles/selection-test.dir/nbsearch.cpp.o" "CMakeFiles/selection-test.dir/poscalc.cpp.o" "CMakeFiles/selection-test.dir/selectioncollection.cpp.o" "CMakeFiles/selection-test.dir/selectionoption.cpp.o" "CMakeFiles/selection-test.dir/toputils.cpp.o" "CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/selection-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o" "CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o" "CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o" "CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o" "CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-output-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 92%] Built target tool-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/depend gmake[3]: 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src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o" "CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o" "CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o" "CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-modules-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 92%] Built target trajectoryanalysis-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/termination.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o" "CMakeFiles/mdrun-test.dir/swapcoords.cpp.o" "CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o" "CMakeFiles/mdrun-test.dir/freezegroups.cpp.o" "CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o" "CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 93%] Built target mdrun-output-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 93%] 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-single-rank-algorithms-test cd 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/nonbonded_bench.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/rerun.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-non-integrator-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Built target mdrun-io-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tpitest.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Built target mdrun-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Built target mdrun-non-integrator-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/mimic.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Built target mdrun-tpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o -MF CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o.d -o CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisim.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-multisim-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Built target mdrun-single-rank-algorithms-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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-fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Built target mdrun-mpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange_equivalence.cpp [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-equivalence-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-equivalence-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 96%] Built target mdrun-multisim-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp In file included from /usr/include/CL/cl.h:20, from /usr/include/CL/opencl.h:24, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gmxopencl.h:61, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/gputraits_ocl.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/devicebuffer_datatype.h:60, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/pme.h:51, from /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp:53: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. 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Defaulting to 300 (OpenCL 3.0)") | ^ [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-mpi-pme-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-pme-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o" "CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-pme-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 96%] Built target mdrun-multisim-replex-equivalence-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_basic.cpp [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-basic-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-basic-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-basic-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 96%] Built target mdrun-multisim-replex-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 96%] Building CXX object 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-coupling-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-coupling-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 96%] Built target mdrun-mpi-pme-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-constraints-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o" 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/usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 97%] Built target mdrun-mpi-coordination-basic-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory 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../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 97%] Built target mdrun-mpi-coordination-constraints-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -MF CMakeFiles/mdrun-pull-test.dir/pull.cpp.o.d -o CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pull.cpp [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables 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../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Linking CXX executable ../../../../bin/mdrun-vsites-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-vsites-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o" "CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-vsites-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 97%] Built target mdrun-fep-test /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255580].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255581].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256649].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256650].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256653].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:34: note: '' declared here 140 | EXPECT_CALL(topic1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256656].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:32: note: '' declared here 141 | EXPECT_CALL(sub1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256659].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:32: note: '' declared here 142 | EXPECT_CALL(sub2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256662].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:32: note: '' declared here 143 | EXPECT_CALL(sub3, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256665].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:34: note: '' declared here 144 | EXPECT_CALL(topic2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.254599].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:33: note: '' declared here 92 | EXPECT_CALL(topic, writeHelp(_)); | ^ [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243854].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:32: note: '' declared here 116 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243700].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:32: note: '' declared here 101 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.242871].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:32: note: '' declared here 86 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240024].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:27: note: '' declared here 71 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240768].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240769].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244202].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:27: note: '' declared here 148 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244205].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244206].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244046].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:31: note: '' declared here 131 | EXPECT_CALL(mod, writeHelp(_)); | ^ [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:106:5, inlined from 'gmx::test::MockOptionsModule::MockOptionsModule()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249346].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockOptionsModule::MockOptionsModule()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:24: note: '' declared here 113 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249218].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:24: note: '' declared here 89 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249224].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:29: note: '' declared here 90 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockModule::checkHelpContext)); | ^ [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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../../../../bin/commandline-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 98%] Built target commandline-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [ 98%] 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [100%] Linking CXX executable ../../../../bin/mdrunutility-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches 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../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target mdrunutility-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity_mpi.cpp [100%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [100%] Linking CXX executable ../../../../bin/mdrunutility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o" "CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-mpi-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target mdrunutility-mpi-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -MF CMakeFiles/analysisdata-test.dir/arraydata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/arraydata.cpp [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o -MF CMakeFiles/analysisdata-test.dir/average.cpp.o.d -o CMakeFiles/analysisdata-test.dir/average.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/average.cpp [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/histogram.cpp [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -MF CMakeFiles/analysisdata-test.dir/lifetime.cpp.o.d -o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/lifetime.cpp [100%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-comment -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [100%] Linking CXX executable ../../../../bin/analysisdata-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o" "CMakeFiles/analysisdata-test.dir/arraydata.cpp.o" "CMakeFiles/analysisdata-test.dir/average.cpp.o" "CMakeFiles/analysisdata-test.dir/histogram.cpp.o" "CMakeFiles/analysisdata-test.dir/lifetime.cpp.o" "CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/analysisdata-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi.a -ldl /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3f.so -lflexiblas /usr/lib64/libOpenCL.so -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target mdrun-simulator-comparison-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target mdrun-pull-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target mdrun-vsites-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target analysisdata-test /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles/tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target tests /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Running all tests except physical validation /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build Start 1: TestUtilsUnitTests 1/73 Test #1: TestUtilsUnitTests ............................. Passed 2.30 sec Start 2: TestUtilsMpiUnitTests 2/73 Test #2: TestUtilsMpiUnitTests .......................... Passed 1.25 sec Start 3: UtilityUnitTests 3/73 Test #3: UtilityUnitTests ............................... Passed 1.33 sec Start 4: UtilityMpiUnitTests 4/73 Test #4: UtilityMpiUnitTests ............................ Passed 1.25 sec Start 5: GmxlibTests 5/73 Test #5: GmxlibTests .................................... Passed 1.26 sec Start 6: MdlibUnitTest 6/73 Test #6: MdlibUnitTest .................................. Passed 1.34 sec Start 7: AwhTest 7/73 Test #7: AwhTest ........................................ Passed 1.24 sec Start 8: DensityFittingAppliedForcesUnitTest 8/73 Test #8: DensityFittingAppliedForcesUnitTest ............ Passed 1.22 sec Start 9: QMMMAppliedForcesUnitTest 9/73 Test #9: QMMMAppliedForcesUnitTest ...................... Passed 1.38 sec Start 10: AppliedForcesUnitTest 10/73 Test #10: AppliedForcesUnitTest .......................... Passed 1.19 sec Start 11: ListedForcesTest 11/73 Test #11: ListedForcesTest ............................... Passed 1.25 sec Start 12: NbnxmTests 12/73 Test #12: NbnxmTests ..................................... Passed 1.18 sec Start 13: CommandLineUnitTests 13/73 Test #13: CommandLineUnitTests ........................... Passed 1.12 sec Start 14: DomDecTests 14/73 Test #14: DomDecTests .................................... Passed 1.18 sec Start 15: DomDecMpiTests 15/73 Test #15: DomDecMpiTests ................................. Passed 1.26 sec Start 16: EwaldUnitTests 16/73 Test #16: EwaldUnitTests ................................. Passed 1.43 sec Start 17: FFTUnitTests 17/73 Test #17: FFTUnitTests ................................... Passed 1.26 sec Start 18: GpuUtilsUnitTests 18/73 Test #18: GpuUtilsUnitTests .............................. Passed 1.23 sec Start 19: HardwareUnitTests 19/73 Test #19: HardwareUnitTests .............................. Passed 1.26 sec Start 20: MathUnitTests 20/73 Test #20: MathUnitTests .................................. Passed 1.32 sec Start 21: MdrunUtilityUnitTests 21/73 Test #21: MdrunUtilityUnitTests .......................... Passed 1.12 sec Start 22: MdrunUtilityMpiUnitTests 22/73 Test #22: MdrunUtilityMpiUnitTests ....................... Passed 1.13 sec Start 23: MDSpanTests 23/73 Test #23: MDSpanTests .................................... Passed 1.17 sec Start 24: MdtypesUnitTest 24/73 Test #24: MdtypesUnitTest ................................ Passed 1.22 sec Start 25: OnlineHelpUnitTests 25/73 Test #25: OnlineHelpUnitTests ............................ Passed 1.19 sec Start 26: OptionsUnitTests 26/73 Test #26: OptionsUnitTests ............................... Passed 1.27 sec Start 27: PbcutilUnitTest 27/73 Test #27: PbcutilUnitTest ................................ Passed 1.21 sec Start 28: RandomUnitTests 28/73 Test #28: RandomUnitTests ................................ Passed 1.19 sec Start 29: RestraintTests 29/73 Test #29: RestraintTests ................................. Passed 1.17 sec Start 30: TableUnitTests 30/73 Test #30: TableUnitTests ................................. Passed 1.25 sec Start 31: TaskAssignmentUnitTests 31/73 Test #31: TaskAssignmentUnitTests ........................ Passed 1.18 sec Start 32: GmxTimingTests 32/73 Test #32: GmxTimingTests ................................. Passed 1.18 sec Start 33: TopologyTest 33/73 Test #33: TopologyTest ................................... Passed 1.22 sec Start 34: PullTest 34/73 Test #34: PullTest ....................................... Passed 1.19 sec Start 35: SimdUnitTests 35/73 Test #35: SimdUnitTests .................................. Passed 1.26 sec Start 36: CompatibilityHelpersTests 36/73 Test #36: CompatibilityHelpersTests ...................... Passed 1.18 sec Start 37: GmxAnaTest 37/73 Test #37: GmxAnaTest ..................................... Passed 1.90 sec Start 38: GmxPreprocessTests 38/73 Test #38: GmxPreprocessTests ............................. Passed 2.04 sec Start 39: Pdb2gmx1Test 39/73 Test #39: Pdb2gmx1Test ................................... Passed 2.38 sec Start 40: Pdb2gmx2Test 40/73 Test #40: Pdb2gmx2Test ................................... Passed 2.35 sec Start 41: Pdb2gmx3Test 41/73 Test #41: Pdb2gmx3Test ................................... Passed 4.15 sec Start 42: CorrelationsTest 42/73 Test #42: CorrelationsTest ............................... Passed 1.26 sec Start 43: AnalysisDataUnitTests 43/73 Test #43: AnalysisDataUnitTests .......................... Passed 1.13 sec Start 44: CoordinateIOTests 44/73 Test #44: CoordinateIOTests .............................. Passed 1.26 sec Start 45: TrajectoryAnalysisUnitTests 45/73 Test #45: TrajectoryAnalysisUnitTests .................... Passed 2.02 sec Start 46: EnergyAnalysisUnitTests 46/73 Test #46: EnergyAnalysisUnitTests ........................ Passed 1.27 sec Start 47: ToolUnitTests 47/73 Test #47: ToolUnitTests .................................. Passed 2.45 sec Start 48: FileIOTests 48/73 Test #48: FileIOTests .................................... Passed 1.24 sec Start 49: SelectionUnitTests 49/73 Test #49: SelectionUnitTests ............................. Passed 1.42 sec Start 50: MdrunOutputTests 50/73 Test #50: MdrunOutputTests ............................... Passed 1.73 sec Start 51: MdrunModulesTests 51/73 Test #51: MdrunModulesTests .............................. Passed 1.92 sec Start 52: MdrunIOTests 52/73 Test #52: MdrunIOTests ................................... Passed 1.64 sec Start 53: MdrunTestsOneRank 53/73 Test #53: MdrunTestsOneRank .............................. Passed 1.85 sec Start 54: MdrunTestsTwoRanks 54/73 Test #54: MdrunTestsTwoRanks ............................. Passed 1.78 sec Start 55: MdrunSingleRankAlgorithmsTests 55/73 Test #55: MdrunSingleRankAlgorithmsTests ................. Passed 1.42 sec Start 56: MdrunNonIntegratorTests 56/73 Test #56: MdrunNonIntegratorTests ........................ Passed 2.40 sec Start 57: MdrunTpiTests 57/73 Test #57: MdrunTpiTests .................................. Passed 1.84 sec Start 58: MdrunMpiTests 58/73 Test #58: MdrunMpiTests .................................. Passed 2.62 sec Start 59: MdrunMultiSimTests 59/73 Test #59: MdrunMultiSimTests ............................. Passed 2.06 sec Start 60: MdrunMultiSimReplexTests 60/73 Test #60: MdrunMultiSimReplexTests ....................... Passed 1.29 sec Start 61: MdrunMultiSimReplexEquivalenceTests 61/73 Test #61: MdrunMultiSimReplexEquivalenceTests ............ Passed 3.37 sec Start 62: MdrunMpi1RankPmeTests 62/73 Test #62: MdrunMpi1RankPmeTests .......................... Passed 1.23 sec Start 63: MdrunMpi2RankPmeTests 63/73 Test #63: MdrunMpi2RankPmeTests .......................... Passed 1.29 sec Start 64: MdrunMpiCoordinationBasicTestsOneRank 64/73 Test #64: MdrunMpiCoordinationBasicTestsOneRank .......... Passed 1.12 sec Start 65: MdrunMpiCoordinationBasicTestsTwoRanks 65/73 Test #65: MdrunMpiCoordinationBasicTestsTwoRanks ......... Passed 1.13 sec Start 66: MdrunMpiCoordinationCouplingTestsOneRank 66/73 Test #66: MdrunMpiCoordinationCouplingTestsOneRank ....... Passed 1.13 sec Start 67: MdrunMpiCoordinationCouplingTestsTwoRanks 67/73 Test #67: MdrunMpiCoordinationCouplingTestsTwoRanks ...... Passed 1.14 sec Start 68: MdrunMpiCoordinationConstraintsTestsOneRank 68/73 Test #68: MdrunMpiCoordinationConstraintsTestsOneRank .... Passed 1.12 sec Start 69: MdrunMpiCoordinationConstraintsTestsTwoRanks 69/73 Test #69: MdrunMpiCoordinationConstraintsTestsTwoRanks ... Passed 1.13 sec Start 70: MdrunFEPTests 70/73 Test #70: MdrunFEPTests .................................. Passed 1.13 sec Start 71: MdrunPullTests 71/73 Test #71: MdrunPullTests ................................. Passed 1.97 sec Start 72: MdrunSimulatorComparison 72/73 Test #72: MdrunSimulatorComparison ....................... Passed 1.13 sec Start 73: MdrunVirtualSiteTests 73/73 Test #73: MdrunVirtualSiteTests .......................... Passed 1.23 sec 100% tests passed, 0 tests failed out of 73 Label Time Summary: GTest = 108.96 sec*proc (73 tests) IntegrationTest = 33.80 sec*proc (19 tests) MpiTest = 28.39 sec*proc (19 tests) QuickGpuTest = 23.44 sec*proc (15 tests) SlowTest = 23.42 sec*proc (13 tests) UnitTest = 51.74 sec*proc (41 tests) Total Test time (real) = 109.12 sec gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target run-ctest-nophys /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/tests /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Some tests not available cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target missing-tests-notice /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles/check.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/check.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' [100%] Built target check gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build/CMakeFiles 0 gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi/redhat-linux-build' + [[ openmpi = openmpi ]] + unset OMPI_MCA_rmaps_base_oversubscribe ~/build/BUILD/gromacs-2022.3 + popd + test -n openmpi + module unload mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 ~/build/BUILD/gromacs-2022.3/serial_d ~/build/BUILD/gromacs-2022.3 + for p in '' _d + for mpi in '' mpich openmpi + test -n '' + pushd serial_d + [[ '' = openmpi ]] + /usr/bin/cmake --build redhat-linux-build -j4 --verbose --target check Change Dir: '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 check /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/gmake -f CMakeFiles/Makefile2 check gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles 97 /usr/bin/gmake -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/depend /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/CMakeFiles/gmx_objlib.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs 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Dependencies file "src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Dependencies file "src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/alltoall.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/barrier.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/bcast.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". [ 0%] Generating release version information Consolidate compiler generated dependencies of target scanner cd /builddir/build/BUILD/gromacs-2022.3 && /usr/bin/cmake -D PYTHON_EXECUTABLE=/usr/bin/python3.12 -D PROJECT_VERSION=2022.3-Fedora39 -D PROJECT_SOURCE_DIR=/builddir/build/BUILD/gromacs-2022.3 -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/programs/CMakeFiles/gmx_objlib.dir/legacymodules.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/CMakeFiles/gmx_objlib.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target gmx_objlib gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/selection/CMakeFiles/scanner.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx_objlib.dir/build.make src/programs/CMakeFiles/gmx_objlib.dir/build Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/programs/CMakeFiles/gmx_objlib.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/lock.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_protocol.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_send_recv.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/p2p_wait.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". [ 0%] Built target scanner Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/pthreads.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" Consolidate compiler generated dependencies of target thread_mpi gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/build Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pullelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/programs/CMakeFiles/view_objlib.dir/view/buttons.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/CMakeFiles/view_objlib.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Dependencies file "src/programs/CMakeFiles/view_objlib.dir/view/dialogs.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/CMakeFiles/view_objlib.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpwritercontext.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/rstparser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/basicoptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/behaviorcollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/options.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/treesupport.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/boxutilities.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/com.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/mshift.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc_simd.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbcenums.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/restraint/restraintmdmodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/centerofmass.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/compiler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/evaluate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/indexutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/mempool.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/nbsearch.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/params.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/parsetree.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/poscalc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/position.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/scanner_internal.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectioncollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionbehavior.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selelem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selmethod.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selvalue.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_compare.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_keywords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_merge.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_permute.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_position.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_same.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_simple.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/symrec.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/simd/support.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/statistics/statistics.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/swap/swapcoords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/cubicsplinetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/forcetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/timing/cyclecounter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/timing/walltime_accounting.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/check.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/trjconv.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/atomprop.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/atoms.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/idef.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/ifunc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/index.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/invblock.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules/select.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules/surfacearea.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules/trajectory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/any.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/basenetwork.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion-gen.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/baseversion.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/binaryinformation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/compare.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/coolstuff.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/cstringutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/datafilefinder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/directoryenumerator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/errorformat.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/exceptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/fatalerror.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/fileredirector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/filestream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/futil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/gmxassert.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/gmxomp.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/init.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/inmemoryserializer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreemdpwriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreeserializer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreetransform.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/logger.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/loggerbuilder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/message_string_collector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/mpiinfo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/niceheader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/path.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/physicalnodecommunicator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/pleasecite.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/programcontext.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/smalloc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/strconvert.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/strdb.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sycl_version_information.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/textreader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/textwriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target libgromacs gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 60%] Built target libgromacs /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/depend /usr/bin/gmake -f api/gmxapi/CMakeFiles/gmxapi.dir/build.make api/gmxapi/CMakeFiles/gmxapi.dir/depend /usr/bin/gmake -f api/nblib/CMakeFiles/nblib.dir/build.make api/nblib/CMakeFiles/nblib.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/CMakeFiles/gmx.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/gmxapi /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/DependInfo.cmake "--color=" Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/context.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/gmx.dir/build.make src/programs/CMakeFiles/gmx.dir/build Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/exceptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/programs/CMakeFiles/gmx.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/gmxapi.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/box.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/md.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/mdmodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/mdsignals.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/gmxcalculatorcpu.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/resourceassignment.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/session.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/integrator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". [ 60%] Built target gmx /usr/bin/gmake -f tests/CMakeFiles/gmxtests.dir/build.make tests/CMakeFiles/gmxtests.dir/depend Dependencies file "api/nblib/CMakeFiles/nblib.dir/interactions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/status.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/system.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/calculator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/tests/CMakeFiles/gmxtests.dir/DependInfo.cmake "--color=" Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/conversions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/convertGmxToNblib.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/tpr.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/listed_forces/transformations.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/version.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/molecules.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/nbnxmsetuphelpers.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/gmxapi/CMakeFiles/gmxapi.dir/cpp/workflow.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/CMakeFiles/gmxapi.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/particlesequencer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/particletype.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f tests/CMakeFiles/gmxtests.dir/build.make tests/CMakeFiles/gmxtests.dir/build Dependencies file "api/nblib/CMakeFiles/nblib.dir/simulationstate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target gmxapi Dependencies file "api/nblib/CMakeFiles/nblib.dir/topology.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'tests/CMakeFiles/gmxtests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/gmxapi/CMakeFiles/gmxapi.dir/build.make api/gmxapi/CMakeFiles/gmxapi.dir/build Dependencies file "api/nblib/CMakeFiles/nblib.dir/topologyhelpers.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/tpr.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'api/gmxapi/CMakeFiles/gmxapi.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' Dependencies file "api/nblib/CMakeFiles/nblib.dir/util/setup.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". Dependencies file "api/nblib/CMakeFiles/nblib.dir/virials.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib.dir/compiler_depend.internal". [ 60%] Built target gmxtests [ 61%] Built target gmxapi Consolidate compiler generated dependencies of target nblib gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/CMakeFiles/nblib.dir/build.make api/nblib/CMakeFiles/nblib.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'api/nblib/CMakeFiles/nblib.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 62%] Built target nblib /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/depend /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples/CMakeFiles/methane-water-integration.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples/CMakeFiles/argon-forces-integration.dir/DependInfo.cmake "--color=" Dependencies file "api/nblib/samples/CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples/CMakeFiles/methane-water-integration.dir/compiler_depend.internal". Dependencies file "api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/samples/CMakeFiles/argon-forces-integration.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target methane-water-integration Consolidate compiler generated dependencies of target argon-forces-integration gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/samples/CMakeFiles/methane-water-integration.dir/build.make api/nblib/samples/CMakeFiles/methane-water-integration.dir/build gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build.make api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'api/nblib/samples/CMakeFiles/methane-water-integration.dir/build'. gmake[3]: Nothing to be done for 'api/nblib/samples/CMakeFiles/argon-forces-integration.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 63%] Built target argon-forces-integration [ 63%] Built target methane-water-integration [ 63%] Linking CXX shared library ../../../../lib/libgtest.so cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.11.0 -o ../../../../lib/libgtest.so.1.11.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgtest.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 63%] Built target gtest /usr/bin/gmake -f src/external/googletest/googlemock/CMakeFiles/gmock.dir/build.make src/external/googletest/googlemock/CMakeFiles/gmock.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/external/googletest/googlemock /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/external/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/external/googletest/googlemock/CMakeFiles/gmock.dir/build.make src/external/googletest/googlemock/CMakeFiles/gmock.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 63%] Building CXX object src/external/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/external/googletest/googlemock && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_CAN_STREAM_RESULTS=0 -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -D_GNU_SOURCE=1 -Dgmock_EXPORTS -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -fPIC -Wall -Wshadow -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=1 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wno-deprecated-copy -MD -MT src/external/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/src/gmock-all.cc [ 63%] Linking CXX shared library ../../../../lib/libgmock.so cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/external/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.11.0 -o ../../../../lib/libgmock.so.1.11.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o" -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib: ../../../../lib/libgtest.so.1.11.0 cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/external/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgmock.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 63%] Built target gmock /usr/bin/gmake -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/testutils /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils/CMakeFiles/testutils.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 64%] Building CXX object src/testutils/CMakeFiles/testutils.dir/cmdlinetest.cpp.o [ 64%] Building CXX object src/testutils/CMakeFiles/testutils.dir/conftest.cpp.o [ 64%] Building CXX object src/testutils/CMakeFiles/testutils.dir/filematchers.cpp.o [ 64%] Building CXX object src/testutils/CMakeFiles/testutils.dir/interactivetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/interactivetest.cpp.o -MF CMakeFiles/testutils.dir/interactivetest.cpp.o.d -o CMakeFiles/testutils.dir/interactivetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/mpi_printer.cpp.o -MF CMakeFiles/testutils.dir/mpi_printer.cpp.o.d -o CMakeFiles/testutils.dir/mpi_printer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/mpi_printer.cpp [ 64%] Building CXX object src/testutils/CMakeFiles/testutils.dir/mpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/mpitest.cpp.o -MF CMakeFiles/testutils.dir/mpitest.cpp.o.d -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/mpitest.cpp [ 64%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o -MF CMakeFiles/testutils.dir/refdata.cpp.o.d -o CMakeFiles/testutils.dir/refdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata.cpp [ 64%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o -MF CMakeFiles/testutils.dir/refdata_xml.cpp.o.d -o CMakeFiles/testutils.dir/refdata_xml.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata_xml.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::(anonymous namespace)::MockLogTarget::gmock_writeEntry(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:62:5, inlined from 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.198941].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp: In member function 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:35: note: '' declared here 113 | EXPECT_CALL(target, writeEntry(testing::_)).Times(0); | ^ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:48: In member function 'testing::internal::MatcherBase, std::allocator >*>::MatcherBase(testing::internal::MatcherBase, std::allocator >*> const&)', inlined from 'testing::Matcher, std::allocator >*>::Matcher(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextInputStream::gmock_readLine(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:71:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211524].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:43: note: '' declared here 90 | EXPECT_CALL(inputStream_, readLine(_)).WillRepeatedly(Invoke(this, &Impl::readInputLine)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextOutputStream::gmock_write(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:78:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211531].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:41: note: '' declared here 92 | EXPECT_CALL(outputStream_, write(_)).WillRepeatedly(Invoke(this, &Impl::addOutput)); | ^ [ 64%] Building CXX object 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-I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -MF CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o.d -o CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 65%] Linking CXX executable ../../../bin/testutils-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/moduletest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 65%] Built target testutils-mpi-test /usr/bin/gmake -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/CMakeFiles/utility-test.dir/DependInfo.cmake "--color=" [ 67%] Building CXX object api/nblib/tests/CMakeFiles/nblib_test_infrastructure.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -MF CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/testasserts_tests.cpp [ 67%] Linking CXX static library ../../../lib/libnblib_test_infrastructure.a cd 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'/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o -MF CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o.d -o CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator_mpi.cpp [ 67%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/terminationhelper.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../bin/utility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o" "CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-mpi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 67%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/trajectorycomparison.cpp [ 68%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -MF CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o.d -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/arrayref.cpp.o cd 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CMakeFiles/utility-test.dir/arrayref.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/arrayref.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 68%] Built target utility-mpi-test /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests/nb_free_energy.cpp [ 68%] Linking CXX executable ../../../bin/testutils-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/testutils-test.dir/interactivetest.cpp.o" "CMakeFiles/testutils-test.dir/refdata_tests.cpp.o" "CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o" "CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o" "CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o" -o ../../../bin/testutils-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libtestutils.a ../../../lib/libtestutils.a ../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 [ 68%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY 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CMakeFiles/mdrun_test_infrastructure.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun_test_infrastructure.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrun_test_infrastructure.a CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o /usr/bin/ranlib ../../../../lib/libmdrun_test_infrastructure.a gmake[3]: Leaving directory 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src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxlib/nonbonded/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../../bin/nonbonded-fep-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nonbonded-fep-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o" "CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/nonbonded-fep-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_d.so.7.0.0 ../../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 68%] Built target testutils-test /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o -MF CMakeFiles/awh-test.dir/awh_setup.cpp.o.d -o CMakeFiles/awh-test.dir/awh_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/awh_setup.cpp [ 68%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestdata.cpp [ 69%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners.cpp [ 69%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o -MF CMakeFiles/awh-test.dir/bias.cpp.o.d -o CMakeFiles/awh-test.dir/bias.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 69%] Built target nonbonded-fep-test /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 70%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfitting.cpp [ 70%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask32.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask32.cpp.o -MF CMakeFiles/utility-test.dir/bitmask32.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask32.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o -MF CMakeFiles/mdlib-test.dir/ebin.cpp.o.d -o CMakeFiles/mdlib-test.dir/ebin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/ebin.cpp [ 70%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingamplitudelookup.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -MF CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o.d -o CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energydrifttracker.cpp [ 70%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask64.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask64.cpp.o -MF CMakeFiles/utility-test.dir/bitmask64.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask64.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -MF CMakeFiles/mdlib-test.dir/energyoutput.cpp.o.d -o CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energyoutput.cpp [ 70%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingforceprovider.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o -MF CMakeFiles/awh-test.dir/biasgrid.cpp.o.d -o CMakeFiles/awh-test.dir/biasgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasgrid.cpp [ 70%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingoptions.cpp [ 70%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask128.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o -MF CMakeFiles/awh-test.dir/biassharing.cpp.o.d -o CMakeFiles/awh-test.dir/biassharing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biassharing.cpp [ 70%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o -MF CMakeFiles/awh-test.dir/biasstate.cpp.o.d -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasstate.cpp [ 70%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/cstringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/cstringutil.cpp.o -MF CMakeFiles/utility-test.dir/cstringutil.cpp.o.d -o CMakeFiles/utility-test.dir/cstringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/cstringutil.cpp [ 70%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/defaultinitializationallocator.cpp [ 71%] Linking CXX executable ../../../../../bin/density_fitting_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/density_fitting_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/density_fitting_applied_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_d.so.7.0.0 ../../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgtest.so.1.11.0 [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o -MF CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o.d -o CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/enumerationhelpers.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -MF CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o.d -o CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias_fep_lambda_state.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -MF CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o.d -o CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/fixedcapacityvector.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Built target density_fitting_applied_forces-test /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 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CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmminputgenerator.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -MF CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o.d -o CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/inmemoryserializer.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrog.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrog.cpp [ 71%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmtopologypreprocessor.cpp [ 71%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreeserializer.cpp [ 71%] Linking CXX executable ../../../../../bin/awh-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/awh-test.dir/awh_setup.cpp.o" "CMakeFiles/awh-test.dir/bias.cpp.o" "CMakeFiles/awh-test.dir/biasgrid.cpp.o" "CMakeFiles/awh-test.dir/biassharing.cpp.o" 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmoptions.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestdata.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreetransform.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners.cpp [ 71%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -DGMX_CP2K=0 -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmforceprovider.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o -MF CMakeFiles/utility-test.dir/listoflists.cpp.o.d -o CMakeFiles/utility-test.dir/listoflists.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/listoflists.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o -MF CMakeFiles/mdlib-test.dir/settle.cpp.o.d -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settle.cpp [ 71%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmm.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Built target awh-test /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -MF CMakeFiles/applied_forces-test.dir/electricfield.cpp.o.d -o CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests/electricfield.cpp [ 71%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Linking CXX executable ../../../../../bin/qmmm_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/qmmm_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/qmmm_applied_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_d.so.7.0.0 ../../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgtest.so.1.11.0 [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestdata.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o -MF CMakeFiles/utility-test.dir/logger.cpp.o.d -o CMakeFiles/utility-test.dir/logger.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/logger.cpp [ 71%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -MF CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o.d -o CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/mdmodulesnotifier.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners.cpp [ 71%] Linking CXX executable ../../../../bin/applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/applied_forces-test.dir/electricfield.cpp.o" "CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/applied_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o -MF CMakeFiles/mdlib-test.dir/shake.cpp.o.d -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/shake.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o -MF CMakeFiles/utility-test.dir/message_string_collector.cpp.o.d -o CMakeFiles/utility-test.dir/message_string_collector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/message_string_collector.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Built target qmmm_applied_forces-test /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/depend gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/DependInfo.cmake "--color=" [ 71%] Built target applied_forces-test /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/depend gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o -MF CMakeFiles/listed_forces-test.dir/bonded.cpp.o.d -o CMakeFiles/listed_forces-test.dir/bonded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/bonded.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -MF CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o.d -o CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o -MF CMakeFiles/utility-test.dir/path.cpp.o.d -o CMakeFiles/utility-test.dir/path.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/path.cpp [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -MF CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o.d -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/simulationsignal.cpp [ 71%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Linking CXX executable ../../../../bin/nbnxm-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nbnxm-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o" "CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/nbnxm-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 71%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroups.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroups.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroups.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -MF CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o.d -o CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o -MF CMakeFiles/utility-test.dir/range.cpp.o.d -o CMakeFiles/utility-test.dir/range.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/range.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Built target nbnxm-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 71%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp [ 71%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o -MF CMakeFiles/listed_forces-test.dir/pairs.cpp.o.d -o CMakeFiles/listed_forces-test.dir/pairs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/pairs.cpp [ 71%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o -MF CMakeFiles/utility-test.dir/strconvert.cpp.o.d -o CMakeFiles/utility-test.dir/strconvert.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp [ 72%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroupscog.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.207740].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp: In member function 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:33: note: '' declared here 77 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockHelpTopic::writeHelpBase)); | ^ In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp:45: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 72%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 72%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -MF CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o.d -o CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringtoenumvalueconverter.cpp [ 72%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp [ 72%] Linking CXX static library ../../../../lib/libonlinehelp-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -P CMakeFiles/onlinehelp-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libonlinehelp-test-shared.a "CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o" "CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libonlinehelp-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 72%] Built target onlinehelp-test-shared /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 72%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o -MF CMakeFiles/domdec-test.dir/hashedmap.cpp.o.d -o CMakeFiles/domdec-test.dir/hashedmap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/hashedmap.cpp [ 72%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp [ 72%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/localatomsetmanager.cpp [ 72%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -MF CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o.d -o CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/position_restraints.cpp [ 72%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp [ 73%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -MF CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o.d -o CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/wholemoleculetransform.cpp [ 73%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-test.dir/hashedmap.cpp.o" "CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o" "CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 73%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Linking CXX executable ../../../../bin/mdlib-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o" "CMakeFiles/mdlib-test.dir/calcvir.cpp.o" "CMakeFiles/mdlib-test.dir/constr.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/ebin.cpp.o" "CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o" "CMakeFiles/mdlib-test.dir/energyoutput.cpp.o" "CMakeFiles/mdlib-test.dir/expanded.cpp.o" "CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrog.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/settle.cpp.o" "CMakeFiles/mdlib-test.dir/settletestdata.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/shake.cpp.o" "CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o" "CMakeFiles/mdlib-test.dir/updategroups.cpp.o" "CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o" "CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdlib-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 73%] Linking CXX executable ../../../../bin/listed_forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/listed_forces-test.dir/bonded.cpp.o" "CMakeFiles/listed_forces-test.dir/pairs.cpp.o" "CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o" "CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/listed_forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Built target domdec-test /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp [ 73%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o -MF CMakeFiles/utility-test.dir/template_mp.cpp.o.d -o CMakeFiles/utility-test.dir/template_mp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/template_mp.cpp [ 73%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o -MF CMakeFiles/utility-test.dir/textreader.cpp.o.d -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textreader.cpp [ 73%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Linking CXX executable ../../../../bin/domdec-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o" "CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-mpi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Built target listed_forces-test /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Built target domdec-mpi-test /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fft/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o -MF CMakeFiles/utility-test.dir/typetraits.cpp.o.d -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/typetraits.cpp [ 73%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Linking CXX executable ../../../../bin/utility-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-test.dir/alignedallocator.cpp.o" "CMakeFiles/utility-test.dir/arrayref.cpp.o" "CMakeFiles/utility-test.dir/bitmask32.cpp.o" "CMakeFiles/utility-test.dir/bitmask64.cpp.o" "CMakeFiles/utility-test.dir/bitmask128.cpp.o" "CMakeFiles/utility-test.dir/cstringutil.cpp.o" "CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o" "CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o" "CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o" "CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o" "CMakeFiles/utility-test.dir/listoflists.cpp.o" "CMakeFiles/utility-test.dir/logger.cpp.o" "CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o" "CMakeFiles/utility-test.dir/message_string_collector.cpp.o" "CMakeFiles/utility-test.dir/path.cpp.o" "CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o" "CMakeFiles/utility-test.dir/range.cpp.o" "CMakeFiles/utility-test.dir/strconvert.cpp.o" "CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o" "CMakeFiles/utility-test.dir/stringutil.cpp.o" "CMakeFiles/utility-test.dir/template_mp.cpp.o" "CMakeFiles/utility-test.dir/textreader.cpp.o" "CMakeFiles/utility-test.dir/textwriter.cpp.o" "CMakeFiles/utility-test.dir/typetraits.cpp.o" "CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 73%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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Linking CXX executable ../../../../bin/fft-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fft-test.dir/fft.cpp.o" "CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fft-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Built target mdlib-test /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/clfftinitializer.cpp [ 73%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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-MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_availability.cpp [ 73%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp [ 73%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_stream_manager.cpp [ 73%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -MF CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/hostallocator.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 73%] Built target fft-test /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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-DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/hardwaretopology.cpp [ 73%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp [ 73%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/mockhardwaretopology.cpp [ 74%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -MF CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o.d -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp [ 74%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -MF CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/pinnedmemorychecker.cpp [ 74%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" 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CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp [ 74%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp [ 74%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o -MF CMakeFiles/hardware-test.dir/device_management.cpp.o.d -o CMakeFiles/hardware-test.dir/device_management.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -MF CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/typecasts.cpp [ 75%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/gpu_utils-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o" "CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o" "CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o" "CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o" "CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o" "CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o" "CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gpu_utils-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 75%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o -MF CMakeFiles/ewald-test.dir/pme.cpp.o.d -o CMakeFiles/ewald-test.dir/pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp [ 75%] Linking CXX executable ../../../../bin/hardware-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/hardware-test.dir/cpuinfo.cpp.o" "CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/device_management.cpp.o" "CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/hardware-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 75%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/ewald-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o" "CMakeFiles/ewald-test.dir/pmegathertest.cpp.o" "CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o" "CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o" "CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o" "CMakeFiles/ewald-test.dir/pme.cpp.o" "CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/ewald-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Built target gpu_utils-test /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -MF CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o.d -o CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/arrayrefwithpadding.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Built target hardware-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:36: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockThreadAffinityAccess::gmock_setCurrentThreadAffinityToCore(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:70:5, inlined from 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.221900].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp: In member function 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:50: note: '' declared here 59 | ON_CALL(*this, setCurrentThreadAffinityToCore(_)).WillByDefault(Return(true)); | ^ [ 75%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -MF CMakeFiles/math-test.dir/coordinatetransformation.cpp.o.d -o CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/coordinatetransformation.cpp [ 75%] Linking CXX static library ../../../../lib/libmdrunutility-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -P CMakeFiles/mdrunutility-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrunutility-test-shared.a "CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o" "CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libmdrunutility-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Built target mdrunutility-test-shared /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -MF CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o.d -o CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/accessor_policy.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Built target utility-test /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o -MF CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o.d -o CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/observablesreducer.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Built target ewald-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpformat.cpp [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o -MF CMakeFiles/mdspan-test.dir/extents.cpp.o.d -o CMakeFiles/mdspan-test.dir/extents.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/extents.cpp [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o -MF CMakeFiles/math-test.dir/densityfit.cpp.o.d -o CMakeFiles/math-test.dir/densityfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfit.cpp [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extensions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extensions.cpp.o -MF CMakeFiles/mdspan-test.dir/extensions.cpp.o.d -o CMakeFiles/mdspan-test.dir/extensions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/extensions.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:47: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.220014].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:36: note: '' declared here 106 | EXPECT_CALL(firstSub, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.219159].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:38: note: '' declared here 95 | EXPECT_CALL(rootTopic_, writeHelp(_)); | ^ [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpwritercontext.cpp [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o -MF CMakeFiles/mdspan-test.dir/layouts.cpp.o.d -o CMakeFiles/mdspan-test.dir/layouts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/layouts.cpp [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/dofit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o -MF CMakeFiles/mdspan-test.dir/mdspan.cpp.o.d -o CMakeFiles/mdspan-test.dir/mdspan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/mdspan.cpp [ 75%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/checkpointdata.cpp [ 75%] Linking CXX executable ../../../../bin/onlinehelp-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o" "CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/onlinehelp-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -MF CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o.d -o CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/exponentialmovingaverage.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/math-test.dir/functions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/functions.cpp [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Built target onlinehelp-test /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 75%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -MF CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o.d -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp [ 75%] Linking CXX executable ../../../../bin/mdspan-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdspan-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o" "CMakeFiles/mdspan-test.dir/extents.cpp.o" "CMakeFiles/mdspan-test.dir/extensions.cpp.o" "CMakeFiles/mdspan-test.dir/layouts.cpp.o" "CMakeFiles/mdspan-test.dir/mdspan.cpp.o" "CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdspan-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 76%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o -MF CMakeFiles/math-test.dir/gausstransform.cpp.o.d -o CMakeFiles/math-test.dir/gausstransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/gausstransform.cpp [ 76%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -MF CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o.d -o CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/forcebuffers.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:49: In member function 'testing::internal::MatcherBase, std::allocator > const&>::MatcherBase(testing::internal::MatcherBase, std::allocator > const&> const&)', inlined from 'testing::Matcher, std::allocator > const&>::Matcher(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:514:18, inlined from '(anonymous namespace)::MockOptionStorage::gmock_convertValue(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:113:5, inlined from '__ct ' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:5, inlined from '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:138:43: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.394537].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp: In member function '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:32: note: '' declared here 147 | ON_CALL(*this, convertValue(_)).WillByDefault(WithArg<0>(Invoke(this, &MockOptionStorage::addValue))); | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 76%] Built target mdspan-test /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 76%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -MF CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o.d -o CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/multipletimestepping.cpp [ 76%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o -MF CMakeFiles/math-test.dir/densityfittingforce.cpp.o.d -o CMakeFiles/math-test.dir/densityfittingforce.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfittingforce.cpp [ 76%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o cd 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77%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o -MF CMakeFiles/math-test.dir/matrix.cpp.o.d -o CMakeFiles/math-test.dir/matrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/matrix.cpp [ 77%] Linking CXX executable ../../../../bin/mdtypes-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdtypes-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o" "CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o" "CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o" "CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o" "CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdtypes-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 77%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o -MF CMakeFiles/pbcutil-test.dir/pbc.cpp.o.d -o CMakeFiles/pbcutil-test.dir/pbc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbc.cpp [ 77%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -MF CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o.d -o CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbcenums.cpp [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o -MF CMakeFiles/math-test.dir/multidimarray.cpp.o.d -o CMakeFiles/math-test.dir/multidimarray.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/multidimarray.cpp [ 77%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 77%] Linking CXX executable ../../../../bin/pbcutil-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbcutil-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pbcutil-test.dir/com.cpp.o" "CMakeFiles/pbcutil-test.dir/mshift.cpp.o" "CMakeFiles/pbcutil-test.dir/pbc.cpp.o" "CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o" "CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pbcutil-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 77%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/optionsassigner.cpp [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o -MF CMakeFiles/math-test.dir/optimization.cpp.o.d -o CMakeFiles/math-test.dir/optimization.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/optimization.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 77%] Built target pbcutil-test /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 78%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/exponentialdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/exponentialdistribution.cpp [ 78%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o -MF CMakeFiles/math-test.dir/paddedvector.cpp.o.d -o CMakeFiles/math-test.dir/paddedvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/paddedvector.cpp [ 78%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o -MF CMakeFiles/random-test.dir/gammadistribution.cpp.o.d -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/gammadistribution.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 78%] Built target mdtypes-test /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 78%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/restraint/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/restraint/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o -MF CMakeFiles/restraintpotential-test.dir/manager.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests/manager.cpp [ 78%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/restraint/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/restraint/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o -MF CMakeFiles/random-test.dir/normaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/normaldistribution.cpp [ 78%] Linking CXX executable ../../../../bin/restraintpotential-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/restraintpotential-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/restraintpotential-test.dir/manager.cpp.o" "CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/restraintpotential-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 79%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o -MF CMakeFiles/options-test.dir/repeatingsection.cpp.o.d -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/repeatingsection.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o -MF CMakeFiles/random-test.dir/seed.cpp.o.d -o CMakeFiles/random-test.dir/seed.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/seed.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 79%] Built target restraintpotential-test /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build gmake[3]: Entering directory 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-I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -MF CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/tabulatednormaldistribution.cpp [ 79%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o -MF CMakeFiles/options-test.dir/timeunitmanager.cpp.o.d -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/timeunitmanager.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o -MF CMakeFiles/random-test.dir/threefry.cpp.o.d -o CMakeFiles/random-test.dir/threefry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/threefry.cpp [ 79%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/treesupport.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/treesupport.cpp.o -MF CMakeFiles/options-test.dir/treesupport.cpp.o.d -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/treesupport.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformintdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformintdistribution.cpp [ 79%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tables/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Linking CXX executable ../../../../bin/table-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/table-test.dir/splinetable.cpp.o" "CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/table-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 79%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformrealdistribution.cpp [ 79%] Linking CXX executable ../../../../bin/options-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o" "CMakeFiles/options-test.dir/filenameoption.cpp.o" "CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o" "CMakeFiles/options-test.dir/option.cpp.o" "CMakeFiles/options-test.dir/optionsassigner.cpp.o" "CMakeFiles/options-test.dir/repeatingsection.cpp.o" "CMakeFiles/options-test.dir/timeunitmanager.cpp.o" "CMakeFiles/options-test.dir/treesupport.cpp.o" "CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/options-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/vectypes.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem 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-lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 79%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 79%] Built target table-test /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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"CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o" "CMakeFiles/math-test.dir/coordinatetransformation.cpp.o" "CMakeFiles/math-test.dir/densityfit.cpp.o" "CMakeFiles/math-test.dir/dofit.cpp.o" "CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o" "CMakeFiles/math-test.dir/functions.cpp.o" "CMakeFiles/math-test.dir/gausstransform.cpp.o" "CMakeFiles/math-test.dir/densityfittingforce.cpp.o" "CMakeFiles/math-test.dir/invertmatrix.cpp.o" "CMakeFiles/math-test.dir/matrix.cpp.o" "CMakeFiles/math-test.dir/multidimarray.cpp.o" "CMakeFiles/math-test.dir/neldermead.cpp.o" "CMakeFiles/math-test.dir/optimization.cpp.o" "CMakeFiles/math-test.dir/paddedvector.cpp.o" "CMakeFiles/math-test.dir/vectypes.cpp.o" "CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/math-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 79%] Built target random-test /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/timing/tests/CMakeFiles/timing-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 80%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/timing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include 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../../../../bin/taskassignment-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o" "CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/taskassignment-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 80%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Linking CXX executable ../../../../bin/timing-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/timing-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/timing-test.dir/timing.cpp.o" "CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/timing-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 80%] Built target taskassignment-test /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests/CMakeFiles/topology-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -MF CMakeFiles/topology-test.dir/exclusionblocks.cpp.o.d -o CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/exclusionblocks.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 80%] Built target timing-test [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/idef.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/idef.cpp.o -MF CMakeFiles/topology-test.dir/idef.cpp.o.d -o CMakeFiles/topology-test.dir/idef.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/idef.cpp [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o -MF CMakeFiles/topology-test.dir/mtop.cpp.o.d -o CMakeFiles/topology-test.dir/mtop.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/mtop.cpp [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o -MF CMakeFiles/topology-test.dir/symtab.cpp.o.d -o CMakeFiles/topology-test.dir/symtab.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/symtab.cpp [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/topsort.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/topsort.cpp.o -MF CMakeFiles/topology-test.dir/topsort.cpp.o.d -o CMakeFiles/topology-test.dir/topsort.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/topsort.cpp [ 81%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 81%] Linking CXX executable ../../../../bin/topology-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/topology-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/topology-test.dir/exclusionblocks.cpp.o" "CMakeFiles/topology-test.dir/idef.cpp.o" "CMakeFiles/topology-test.dir/mtop.cpp.o" "CMakeFiles/topology-test.dir/symtab.cpp.o" "CMakeFiles/topology-test.dir/topsort.cpp.o" "CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/topology-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 81%] Built target options-test /usr/bin/gmake -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pulling/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 81%] Building CXX object src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/pull.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pulling/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/pull.cpp.o -MF CMakeFiles/pull-test.dir/pull.cpp.o.d -o CMakeFiles/pull-test.dir/pull.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/tests/pull.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 81%] Built target math-test /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o -MF CMakeFiles/simd-test.dir/base.cpp.o.d -o CMakeFiles/simd-test.dir/base.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/base.cpp [ 82%] Building CXX object src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pulling/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/pull-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pull-test.dir/pull.cpp.o" "CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pull-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lmuparser -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -MF CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o.d -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/bootstrap_loadstore.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o -MF CMakeFiles/simd-test.dir/scalar.cpp.o.d -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 82%] Built target topology-test /usr/bin/gmake -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/compat/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/mp11.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/compat/tests/CMakeFiles/compat-test.dir/mp11.cpp.o -MF CMakeFiles/compat-test.dir/mp11.cpp.o.d -o CMakeFiles/compat-test.dir/mp11.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests/mp11.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 82%] Built target pull-test /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o -MF CMakeFiles/simd-test.dir/scalar_util.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_util.cpp [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o cd 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o -MF CMakeFiles/simd-test.dir/scalar_math.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_math.cpp [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_chi.cpp [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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-MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o -MF CMakeFiles/simd-test.dir/simd.cpp.o.d -o CMakeFiles/simd-test.dir/simd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd.cpp [ 82%] Linking CXX executable ../../../../bin/compat-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_mindist.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint_util.cpp [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_traj.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 82%] Built target compat-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 82%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/editconf.cpp [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o -MF CMakeFiles/simd-test.dir/simd_integer.cpp.o.d -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_integer.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genconf.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o -MF CMakeFiles/simd-test.dir/simd_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp [ 83%] Linking CXX executable ../../../../bin/gmxana-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxana-test.dir/entropy.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o" "CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxana-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genion.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In static member function 'static std::vector > gmx::test::SimdMathTest::generateTestPoints(Range, std::size_t)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^~~~~~~~~~~~ [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_memory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_memory.cpp.o -MF CMakeFiles/simd-test.dir/simd_memory.cpp.o.d -o CMakeFiles/simd-test.dir/simd_memory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_memory.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genrestr.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_atomtype.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_bond_atomtype.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_vector_operations.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o -MF CMakeFiles/simd-test.dir/simd4.cpp.o.d -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe 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src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/grompp_directives.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 84%] Built target gmxana-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 85%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_vector_operations.cpp [ 85%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/insert_molecules.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/readir.cpp [ 85%] Linking CXX executable ../../../../bin/simd-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/simd-test.dir/base.cpp.o" "CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o" "CMakeFiles/simd-test.dir/scalar.cpp.o" "CMakeFiles/simd-test.dir/scalar_util.cpp.o" "CMakeFiles/simd-test.dir/scalar_math.cpp.o" "CMakeFiles/simd-test.dir/simd.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o" "CMakeFiles/simd-test.dir/simd_integer.cpp.o" "CMakeFiles/simd-test.dir/simd_math.cpp.o" "CMakeFiles/simd-test.dir/simd_memory.cpp.o" "CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/simd4.cpp.o" "CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd4_math.cpp.o" "CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/simd-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/solvate.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/topdirs.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 85%] Linking CXX executable ../../../../bin/gmxpreprocess-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxpreprocess-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 85%] Linking CXX executable ../../../../bin/pdb2gmx1-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx1-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx1-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In member function 'compareSimdMathFunction.constprop': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:309:87: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 309 | std::vector testPoints = generateTestPoints(compareSettings.range, s_nPoints); | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In function 'generateTestPointsTest': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:416:32: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 416 | result = generateTestPoints(Range(-1e10, -1), points); | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In function 'generateTestPoints': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 85%] Built target simd-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 85%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 86%] Built target gmxpreprocess-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 86%] Built target pdb2gmx1-test /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -MF CMakeFiles/correlations-test.dir/correlationdataset.cpp.o.d -o CMakeFiles/correlations-test.dir/correlationdataset.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/correlationdataset.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o -MF CMakeFiles/correlations-test.dir/expfit.cpp.o.d -o CMakeFiles/correlations-test.dir/expfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/expfit.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/datatest.cpp [ 86%] Linking CXX executable ../../../../bin/correlations-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/correlations-test.dir/autocorr.cpp.o" "CMakeFiles/correlations-test.dir/correlationdataset.cpp.o" "CMakeFiles/correlations-test.dir/expfit.cpp.o" "CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o" "CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/correlations-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 86%] Linking CXX executable ../../../../bin/pdb2gmx2-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx2-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx2-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 86%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o cd 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src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp [ 86%] Linking CXX executable ../../../../bin/pdb2gmx3-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx3-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx3-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 86%] Built target correlations-test /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make 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'/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/builder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/builder.cpp.o -MF CMakeFiles/coordinateio-test.dir/builder.cpp.o.d -o CMakeFiles/coordinateio-test.dir/builder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/builder.cpp [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o -MF CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o.d -o CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/outputadaptercontainer.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228063].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228064].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_dataStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:73:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237615].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:35: note: '' declared here 579 | EXPECT_CALL(*this, dataStarted(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237620].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:40: note: '' declared here 583 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237628].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:47: note: '' declared here 589 | EXPECT_CALL(*this, pointsAdded(_)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237636].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:41: note: '' declared here 593 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238074].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:40: note: '' declared here 617 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238109].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:43: note: '' declared here 621 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238382].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:41: note: '' declared here 623 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237552].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:44: note: '' declared here 551 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237570].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:47: note: '' declared here 557 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237575].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:45: note: '' declared here 559 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o -MF CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o.d -o CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/energyanalysis/tests/legacyenergy.cpp [ 87%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Linking CXX static library ../../../../lib/libanalysisdata-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -P CMakeFiles/analysisdata-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libanalysisdata-test-shared.a "CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libanalysisdata-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 87%] Built target analysisdata-test-shared /usr/bin/gmake -f src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build.make src/gromacs/tools/tests/CMakeFiles/tool-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests/CMakeFiles/tool-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build.make src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build gmake[3]: Entering directory 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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../../../../lib/libgtest.so.1.11.0 [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o -MF CMakeFiles/tool-test.dir/helpwriting.cpp.o.d -o CMakeFiles/tool-test.dir/helpwriting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/helpwriting.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 87%] Built target pdb2gmx3-test /usr/bin/gmake -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe 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-DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o -MF CMakeFiles/fileio-test.dir/confio.cpp.o.d -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/confio.cpp [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o -MF CMakeFiles/tool-test.dir/trjconv.cpp.o.d -o CMakeFiles/tool-test.dir/trjconv.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/trjconv.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 87%] Built target energyanalysis-test /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/filemd5.cpp.o -MF CMakeFiles/fileio-test.dir/filemd5.cpp.o.d -o CMakeFiles/fileio-test.dir/filemd5.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/filemd5.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o -MF CMakeFiles/tool-test.dir/convert-tpr.cpp.o.d -o CMakeFiles/tool-test.dir/convert-tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/convert-tpr.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o -MF CMakeFiles/coordinateio-test.dir/setatoms.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setatoms.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setatoms.cpp [ 87%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o -MF CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcdensitymap.cpp [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setbothtime.cpp [ 87%] Linking CXX executable ../../../../bin/tool-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tool-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/tool-test.dir/dump.cpp.o" "CMakeFiles/tool-test.dir/helpwriting.cpp.o" "CMakeFiles/tool-test.dir/report_methods.cpp.o" "CMakeFiles/tool-test.dir/trjconv.cpp.o" "CMakeFiles/tool-test.dir/convert-tpr.cpp.o" "CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/tool-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 87%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -MF CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcdensitymapheader.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setstarttime.cpp [ 87%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o -MF CMakeFiles/selection-test.dir/poscalc.cpp.o.d -o CMakeFiles/selection-test.dir/poscalc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/poscalc.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -MF CMakeFiles/coordinateio-test.dir/settimestep.cpp.o.d -o CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/settimestep.cpp [ 87%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o -MF CMakeFiles/selection-test.dir/selectioncollection.cpp.o.d -o CMakeFiles/selection-test.dir/selectioncollection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectioncollection.cpp [ 87%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o -MF CMakeFiles/fileio-test.dir/readinp.cpp.o.d -o CMakeFiles/fileio-test.dir/readinp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/readinp.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 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directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 87%] Built target tool-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f 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src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Linking CXX executable ../../../../bin/coordinateio-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/coordinateio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/coordinateio-test.dir/builder.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o" "CMakeFiles/coordinateio-test.dir/requirements.cpp.o" "CMakeFiles/coordinateio-test.dir/setatoms.cpp.o" "CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o" "CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o" "CMakeFiles/coordinateio-test.dir/settimestep.cpp.o" "CMakeFiles/coordinateio-test.dir/testmodule.cpp.o" "CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/coordinateio-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o -MF CMakeFiles/fileio-test.dir/tngio.cpp.o.d -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/tngio.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o -MF CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/helpwriting.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock 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src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o -MF CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/outputfiles.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/fileio-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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"CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fileio-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o -MF CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/trajectory_writing.cpp [ 88%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectionoption.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/mdrun-output-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-output-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o" "CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o" "CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o" "CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o" "CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-output-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 88%] Built target coordinateio-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/densityfittingmodule.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 88%] Built target fileio-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o -MF CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/checkpoint.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/interactiveMD.cpp [ 88%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/toputils.cpp [ 88%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/mimic.cpp [ 88%] Linking CXX executable ../../../../bin/selection-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/selection-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto 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../../../../bin/selection-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 ../../../../lib/libgmock.so.1.11.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgtest.so.1.11.0 [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -MF CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/exactcontinuation.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 88%] Built target mdrun-output-test [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/mdrun-modules-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-modules-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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../../../../lib/libgtest.so.1.11.0 [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o -MF CMakeFiles/mdrun-io-test.dir/grompp.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/grompp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/grompp.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o -MF CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/initialconstraints.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 88%] Built target mdrun-modules-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -MF CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o.d -o CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multiple_time_stepping.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -MF CMakeFiles/mdrun-test.dir/swapcoords.cpp.o.d -o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/swapcoords.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/termination.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/termination.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 88%] Built target selection-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -MF CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o.d -o CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tabulated_bonded_interactions.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/freezegroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/freezegroups.cpp.o -MF CMakeFiles/mdrun-test.dir/freezegroups.cpp.o.d -o CMakeFiles/mdrun-test.dir/freezegroups.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/freezegroups.cpp [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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89%] Linking CXX executable ../../../../bin/mdrun-io-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-io-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o" "CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o" "CMakeFiles/mdrun-io-test.dir/grompp.cpp.o" "CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o" "CMakeFiles/mdrun-io-test.dir/termination.cpp.o" "CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-io-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ 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CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-single-rank-algorithms-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-single-rank-algorithms-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-single-rank-algorithms-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o" "CMakeFiles/mdrun-test.dir/swapcoords.cpp.o" "CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o" "CMakeFiles/mdrun-test.dir/freezegroups.cpp.o" "CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o" "CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 90%] Built target mdrun-single-rank-algorithms-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/nonbonded_bench.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/normalmodes.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 90%] Built target mdrun-io-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -MF CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o.d -o CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tpitest.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/rerun.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 90%] Built target mdrun-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/domain_decomposition.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 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CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simple_mdrun.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-tpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-tpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o" "CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-tpi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build 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src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o -MF CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o.d -o CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisim.cpp /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 91%] Linking CXX executable ../../../../bin/mdrun-non-integrator-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-non-integrator-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-non-integrator-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 91%] Built target mdrun-tpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 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-I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-multisim-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 91%] Built target mdrun-mpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange_equivalence.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 91%] Built target mdrun-multisim-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 91%] Built target mdrun-non-integrator-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build [ 91%] Built target mdrun-multisim-replex-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/DependInfo.cmake "--color=" [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-mpi-pme-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-pme-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o" "CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-pme-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_basic.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 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CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_coupling.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-equivalence-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-equivalence-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-basic-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 93%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-coupling-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-coupling-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Built target mdrun-mpi-pme-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Built target mdrun-mpi-coordination-basic-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_constraints.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Built target mdrun-mpi-coordination-coupling-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include 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-fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o -MF CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o.d -o CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/freeenergy.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Built target mdrun-multisim-replex-equivalence-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pull.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-constraints-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/link.txt --verbose=1 /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/depend /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-constraints-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build gmake[3]: Entering directory 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-simulator-comparison-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-simulator-comparison-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o" "CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-simulator-comparison-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Built target mdrun-mpi-coordination-constraints-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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'/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/build.make api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/restraint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/restraint.cpp.o -MF CMakeFiles/gmxapi-test.dir/restraint.cpp.o.d -o CMakeFiles/gmxapi-test.dir/restraint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/restraint.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 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-specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o" "CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-vsites-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 93%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/runner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests && 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/status.cpp.o -MF CMakeFiles/gmxapi-test.dir/status.cpp.o.d -o CMakeFiles/gmxapi-test.dir/status.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/status.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Built target mdrun-pull-test /usr/bin/gmake -f api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/build.make api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/workflow/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/workflow/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/build.make api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 93%] Building CXX object api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/workflow.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/workflow/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/workflow/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/workflow/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/workflow.cpp.o -MF CMakeFiles/workflow-details-test.dir/workflow.cpp.o.d -o CMakeFiles/workflow-details-test.dir/workflow.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/workflow/tests/workflow.cpp [ 93%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 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api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o -MF CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o.d -o CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/stopsignaler.cpp [ 93%] Building CXX object api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/__/__/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/workflow/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/workflow/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/workflow/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/workflow/tests/CMakeFiles/workflow-details-test.dir/__/__/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/workflow-details-test.dir/__/__/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/workflow-details-test.dir/__/__/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/system.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/api/gmxapi/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/include 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-fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/system.cpp.o -MF CMakeFiles/gmxapi-test.dir/system.cpp.o.d -o CMakeFiles/gmxapi-test.dir/system.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/system.cpp [ 94%] Linking CXX executable ../../../../../bin/workflow-details-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/workflow/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/workflow-details-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/workflow-details-test.dir/workflow.cpp.o" "CMakeFiles/workflow-details-test.dir/__/__/__/__/__/src/testutils/unittest_main.cpp.o" ../../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../../bin/workflow-details-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgmxapi_d.so.0.3.1 ../../../../../lib/libmdrun_test_infrastructure.a ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../../lib/libgmock.so.1.11.0 ../../../../../lib/libgtest.so.1.11.0 [ 94%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/version.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/gmxapi/cpp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/version.cpp.o -MF CMakeFiles/gmxapi-test.dir/version.cpp.o.d -o CMakeFiles/gmxapi-test.dir/version.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/gmxapi/cpp/tests/version.cpp [ 94%] Building CXX object api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H 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api/gmxapi/cpp/tests/CMakeFiles/gmxapi-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxapi-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxapi-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 94%] Built target mdrun-vsites-test /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-integrator-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 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/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/nblib-integrator-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-integrator-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/gmxapi-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/gmxapi/cpp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxapi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxapi-test.dir/restraint.cpp.o" "CMakeFiles/gmxapi-test.dir/runner.cpp.o" "CMakeFiles/gmxapi-test.dir/status.cpp.o" "CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o" "CMakeFiles/gmxapi-test.dir/system.cpp.o" "CMakeFiles/gmxapi-test.dir/version.cpp.o" "CMakeFiles/gmxapi-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o" ../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../../../src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/gmxapi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libgmxapi_d.so.0.3.1 ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 94%] Built target workflow-details-test /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-setup-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-setup-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/CMakeFiles/nblib-setup-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-setup-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-setup-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 94%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/box.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/box.cpp.o -MF CMakeFiles/nblib-setup-test.dir/box.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/box.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/box.cpp [ 94%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/interactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" 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/builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/interactions.cpp [ 94%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/particletype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/particletype.cpp.o -MF CMakeFiles/nblib-setup-test.dir/particletype.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/particletype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/particletype.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 94%] Built target gmxapi-test /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:60, from /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/tpr.cpp:43: /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/tpr.cpp: In member function 'virtual void nblib::test::TprReaderTest_Spc2Reads_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/tpr.cpp:91:48: warning: ignoring return value of 'std::vector<_Tp, _Alloc>::size_type std::vector<_Tp, _Alloc>::size() const [with _Tp = gmx::BasicVector; _Alloc = std::allocator >; size_type = long unsigned int]', declared with attribute 'nodiscard' [-Wunused-result] 91 | EXPECT_NO_THROW(tprReader.coordinates_.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:58: /usr/include/c++/13/bits/stl_vector.h:989:7: note: declared here 989 | size() const _GLIBCXX_NOEXCEPT | ^~~~ [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/pbcholder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/molecules.cpp.o -MF CMakeFiles/nblib-setup-test.dir/molecules.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/molecules.cpp [ 95%] Linking CXX executable ../../../bin/nblib-integrator-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-integrator-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/nbnxmsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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../../../bin/nblib-tpr-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-tpr-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-tpr-test.dir/tpr.cpp.o" "CMakeFiles/nblib-tpr-test.dir/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../bin/nblib-tpr-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libmdrun_test_infrastructure.a ../../../lib/libnblib_test_infrastructure.a ../../../lib/libnblib_gmx.so.0.1.0 ../../../lib/libtestutils.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 95%] Built target nblib-integrator-test [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/topology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/topology.cpp.o -MF CMakeFiles/nblib-setup-test.dir/topology.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/topology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/topology.cpp /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-integration-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-integration-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/CMakeFiles/nblib-integration-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/tests/CMakeFiles/nblib-integration-test.dir/build.make api/nblib/tests/CMakeFiles/nblib-integration-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o -MF CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/gmxcalculator.cpp [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/virials.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/virials.cpp.o -MF CMakeFiles/nblib-setup-test.dir/virials.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/virials.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/virials.cpp [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 95%] Built target nblib-tpr-test /usr/bin/gmake -f api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/build.make api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/depend [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o -MF CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/nbkernelsystem.cpp [ 95%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/simstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/simstate.cpp.o -MF CMakeFiles/nblib-integration-test.dir/simstate.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/simstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/tests/simstate.cpp gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/build.make api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/bondtypes.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/gmxcalculator.cpp [ 96%] Building CXX object api/nblib/tests/CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/tests/CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/helpers.cpp [ 96%] Linking CXX executable ../../../bin/nblib-integration-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-integration-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-integration-test.dir/gmxcalculator.cpp.o" "CMakeFiles/nblib-integration-test.dir/nbkernelsystem.cpp.o" "CMakeFiles/nblib-integration-test.dir/simstate.cpp.o" "CMakeFiles/nblib-integration-test.dir/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../bin/nblib-integration-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libnblib_test_infrastructure.a ../../../lib/libnblib_gmx.so.0.1.0 ../../../lib/libtestutils.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/listedtesthelpers.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/kernels.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/typetests.cpp [ 96%] Linking CXX executable ../../../bin/nblib-setup-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-setup-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-setup-test.dir/box.cpp.o" "CMakeFiles/nblib-setup-test.dir/interactions.cpp.o" "CMakeFiles/nblib-setup-test.dir/particletype.cpp.o" "CMakeFiles/nblib-setup-test.dir/pbcholder.cpp.o" "CMakeFiles/nblib-setup-test.dir/molecules.cpp.o" "CMakeFiles/nblib-setup-test.dir/nbnxmsetup.cpp.o" "CMakeFiles/nblib-setup-test.dir/topology.cpp.o" "CMakeFiles/nblib-setup-test.dir/virials.cpp.o" "CMakeFiles/nblib-setup-test.dir/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../bin/nblib-setup-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../lib/libtestutils.a ../../../lib/libmdrun_test_infrastructure.a ../../../lib/libnblib_test_infrastructure.a ../../../lib/libnblib_gmx.so.0.1.0 ../../../lib/libtestutils.a ../../../lib/libgmock.so.1.11.0 ../../../lib/libgtest.so.1.11.0 ../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/calculator.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 96%] Built target nblib-integration-test /usr/bin/gmake -f api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/build.make api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/build.make api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 96%] Building CXX object api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/util/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/setup.cpp.o -MF CMakeFiles/nblib-util-test.dir/setup.cpp.o.d -o CMakeFiles/nblib-util-test.dir/setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/tests/setup.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/conversions.cpp [ 96%] Building CXX object api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/traits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/util/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/traits.cpp.o -MF CMakeFiles/nblib-util-test.dir/traits.cpp.o.d -o CMakeFiles/nblib-util-test.dir/traits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/util/tests/traits.cpp [ 96%] Building CXX object api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/util/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/util/tests/CMakeFiles/nblib-util-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-util-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-util-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/nblib-util-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/util/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-util-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-util-test.dir/setup.cpp.o" "CMakeFiles/nblib-util-test.dir/traits.cpp.o" "CMakeFiles/nblib-util-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../../bin/nblib-util-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libnblib_test_infrastructure.a ../../../../lib/libnblib_gmx.so.0.1.0 ../../../../lib/libtestutils.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/shiftforces.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/api/nblib/listed_forces/tests/transformations.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 96%] Built target nblib-util-test /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 96%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 96%] Built target nblib-setup-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -MF CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity.cpp [ 96%] Building CXX object api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"api/nblib/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/api -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT api/nblib/listed_forces/tests/CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -MF CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o.d -o CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/nblib-listed-forces-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nblib-listed-forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nblib-listed-forces-test.dir/bondtypes.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/gmxcalculator.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/helpers.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/listedtesthelpers.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/kernels.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/typetests.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/calculator.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/conversions.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/shiftforces.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/transformations.cpp.o" "CMakeFiles/nblib-listed-forces-test.dir/__/__/__/__/src/testutils/unittest_main.cpp.o" -o ../../../../bin/nblib-listed-forces-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libnblib_test_infrastructure.a ../../../../lib/libnblib_gmx.so.0.1.0 ../../../../lib/libtestutils.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255580].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255581].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256649].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256650].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256653].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:34: note: '' declared here 140 | EXPECT_CALL(topic1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256656].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:32: note: '' declared here 141 | EXPECT_CALL(sub1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256659].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:32: note: '' declared here 142 | EXPECT_CALL(sub2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256662].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:32: note: '' declared here 143 | EXPECT_CALL(sub3, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256665].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:34: note: '' declared here 144 | EXPECT_CALL(topic2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.254599].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:33: note: '' declared here 92 | EXPECT_CALL(topic, writeHelp(_)); | ^ [ 97%] Linking CXX executable ../../../../bin/mdrunutility-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o" "CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 98%] Built target mdrunutility-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity_mpi.cpp [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243854].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:32: note: '' declared here 116 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243700].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:32: note: '' declared here 101 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.242871].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:32: note: '' declared here 86 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240024].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:27: note: '' declared here 71 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240768].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240769].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244202].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:27: note: '' declared here 148 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244205].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244206].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -MF CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/analysisdata.cpp In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244046].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:31: note: '' declared here 131 | EXPECT_CALL(mod, writeHelp(_)); | ^ [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp [ 98%] Linking CXX executable ../../../../bin/mdrunutility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o" "CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-mpi-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 98%] Built target nblib-listed-forces-test [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineparser.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:106:5, inlined from 'gmx::test::MockOptionsModule::MockOptionsModule()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249346].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockOptionsModule::MockOptionsModule()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:24: note: '' declared here 113 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249218].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:24: note: '' declared here 89 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249224].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:29: note: '' declared here 90 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockModule::checkHelpContext)); | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 98%] Built target mdrunutility-mpi-test /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/moduletest.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o -MF CMakeFiles/commandline-test.dir/filenm.cpp.o.d -o CMakeFiles/commandline-test.dir/filenm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/filenm.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o -MF CMakeFiles/commandline-test.dir/pargs.cpp.o.d -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/pargs.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/angle.cpp [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -MF CMakeFiles/analysisdata-test.dir/arraydata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/arraydata.cpp [ 98%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/clustsize.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o -MF CMakeFiles/analysisdata-test.dir/average.cpp.o.d -o CMakeFiles/analysisdata-test.dir/average.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/average.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/convert_trj.cpp [ 98%] Linking CXX executable ../../../../bin/commandline-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o" "CMakeFiles/commandline-test.dir/filenm.cpp.o" "CMakeFiles/commandline-test.dir/pargs.cpp.o" "CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/commandline-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/distance.cpp [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o -MF CMakeFiles/analysisdata-test.dir/histogram.cpp.o.d -o CMakeFiles/analysisdata-test.dir/histogram.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/histogram.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/extract_cluster.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280633].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280634].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.283875].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.283876].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/freevolume.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/msd.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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[ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -MF CMakeFiles/analysisdata-test.dir/lifetime.cpp.o.d -o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/lifetime.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/rdf.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/select.cpp [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp [100%] Linking CXX executable ../../../../bin/analysisdata-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o" "CMakeFiles/analysisdata-test.dir/arraydata.cpp.o" "CMakeFiles/analysisdata-test.dir/average.cpp.o" "CMakeFiles/analysisdata-test.dir/histogram.cpp.o" "CMakeFiles/analysisdata-test.dir/lifetime.cpp.o" "CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/analysisdata-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/topologyinformation.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/trajectory.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target commandline-test /usr/bin/gmake -f api/nblib/CMakeFiles/nblib-tests.dir/build.make api/nblib/CMakeFiles/nblib-tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/nblib/CMakeFiles/nblib-tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f api/nblib/CMakeFiles/nblib-tests.dir/build.make api/nblib/CMakeFiles/nblib-tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'api/nblib/CMakeFiles/nblib-tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target nblib-tests [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/unionfind.cpp [100%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DGTEST_LINKED_AS_SHARED_LIBRARY=1 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [100%] Linking CXX executable ../../../../bin/trajectoryanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/trajectoryanalysis-test -Wl,-rpath,/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/lib ../../../../lib/libtestutils.a ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_d.so.7.0.0 -lm /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a ../../../../lib/libgmock.so.1.11.0 ../../../../lib/libgtest.so.1.11.0 gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target analysisdata-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target trajectoryanalysis-test /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles/tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target tests /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Running all tests except physical validation /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build Start 1: GmxapiExternalInterfaceTests 1/87 Test #1: GmxapiExternalInterfaceTests ................... Passed 2.09 sec Start 2: GmxapiInternalInterfaceTests 2/87 Test #2: GmxapiInternalInterfaceTests ................... Passed 0.48 sec Start 3: NbLibListedForcesTests 3/87 Test #3: NbLibListedForcesTests ......................... Passed 0.06 sec Start 4: NbLibSamplesTestArgon 4/87 Test #4: NbLibSamplesTestArgon .......................... Passed 0.04 sec Start 5: NbLibSamplesTestMethaneWater 5/87 Test #5: NbLibSamplesTestMethaneWater ................... Passed 0.02 sec Start 6: NbLibUtilTests 6/87 Test #6: NbLibUtilTests ................................. Passed 0.01 sec Start 7: NbLibSetupTests 7/87 Test #7: NbLibSetupTests ................................ Passed 0.02 sec Start 8: NbLibTprTests 8/87 Test #8: NbLibTprTests .................................. Passed 0.03 sec Start 9: NbLibIntegrationTests 9/87 Test #9: NbLibIntegrationTests .......................... Passed 0.02 sec Start 10: NbLibIntegratorTests 10/87 Test #10: NbLibIntegratorTests ........................... Passed 0.01 sec Start 11: TestUtilsUnitTests 11/87 Test #11: TestUtilsUnitTests ............................. Passed 0.02 sec Start 12: TestUtilsMpiUnitTests 12/87 Test #12: TestUtilsMpiUnitTests .......................... Passed 0.02 sec Start 13: UtilityUnitTests 13/87 Test #13: UtilityUnitTests ............................... Passed 0.02 sec Start 14: UtilityMpiUnitTests 14/87 Test #14: UtilityMpiUnitTests ............................ Passed 0.01 sec Start 15: GmxlibTests 15/87 Test #15: GmxlibTests .................................... Passed 0.04 sec Start 16: MdlibUnitTest 16/87 Test #16: MdlibUnitTest .................................. Passed 0.05 sec Start 17: AwhTest 17/87 Test #17: AwhTest ........................................ Passed 0.08 sec Start 18: DensityFittingAppliedForcesUnitTest 18/87 Test #18: DensityFittingAppliedForcesUnitTest ............ Passed 0.02 sec Start 19: QMMMAppliedForcesUnitTest 19/87 Test #19: QMMMAppliedForcesUnitTest ...................... Passed 0.06 sec Start 20: AppliedForcesUnitTest 20/87 Test #20: AppliedForcesUnitTest .......................... Passed 0.01 sec Start 21: ListedForcesTest 21/87 Test #21: ListedForcesTest ............................... Passed 0.03 sec Start 22: NbnxmTests 22/87 Test #22: NbnxmTests ..................................... Passed 0.01 sec Start 23: CommandLineUnitTests 23/87 Test #23: CommandLineUnitTests ........................... Passed 0.02 sec Start 24: DomDecTests 24/87 Test #24: DomDecTests .................................... Passed 0.01 sec Start 25: DomDecMpiTests 25/87 Test #25: DomDecMpiTests ................................. Passed 0.05 sec Start 26: EwaldUnitTests 26/87 Test #26: EwaldUnitTests ................................. Passed 0.18 sec Start 27: FFTUnitTests 27/87 Test #27: FFTUnitTests ................................... Passed 0.04 sec Start 28: GpuUtilsUnitTests 28/87 Test #28: GpuUtilsUnitTests .............................. Passed 0.02 sec Start 29: HardwareUnitTests 29/87 Test #29: HardwareUnitTests .............................. Passed 0.02 sec Start 30: MathUnitTests 30/87 Test #30: MathUnitTests .................................. Passed 0.05 sec Start 31: MdrunUtilityUnitTests 31/87 Test #31: MdrunUtilityUnitTests .......................... Passed 0.01 sec Start 32: MdrunUtilityMpiUnitTests 32/87 Test #32: MdrunUtilityMpiUnitTests ....................... Passed 0.04 sec Start 33: MDSpanTests 33/87 Test #33: MDSpanTests .................................... Passed 0.01 sec Start 34: MdtypesUnitTest 34/87 Test #34: MdtypesUnitTest ................................ Passed 0.02 sec Start 35: OnlineHelpUnitTests 35/87 Test #35: OnlineHelpUnitTests ............................ Passed 0.02 sec Start 36: OptionsUnitTests 36/87 Test #36: OptionsUnitTests ............................... Passed 0.02 sec Start 37: PbcutilUnitTest 37/87 Test #37: PbcutilUnitTest ................................ Passed 0.02 sec Start 38: RandomUnitTests 38/87 Test #38: RandomUnitTests ................................ Passed 0.02 sec Start 39: RestraintTests 39/87 Test #39: RestraintTests ................................. Passed 0.01 sec Start 40: TableUnitTests 40/87 Test #40: TableUnitTests ................................. Passed 0.16 sec Start 41: TaskAssignmentUnitTests 41/87 Test #41: TaskAssignmentUnitTests ........................ Passed 0.02 sec Start 42: GmxTimingTests 42/87 Test #42: GmxTimingTests ................................. Passed 0.01 sec Start 43: TopologyTest 43/87 Test #43: TopologyTest ................................... Passed 0.01 sec Start 44: PullTest 44/87 Test #44: PullTest ....................................... Passed 0.01 sec Start 45: SimdUnitTests 45/87 Test #45: SimdUnitTests .................................. Passed 0.04 sec Start 46: CompatibilityHelpersTests 46/87 Test #46: CompatibilityHelpersTests ...................... Passed 0.01 sec Start 47: GmxAnaTest 47/87 Test #47: GmxAnaTest ..................................... Passed 0.40 sec Start 48: GmxPreprocessTests 48/87 Test #48: GmxPreprocessTests ............................. Passed 0.66 sec Start 49: Pdb2gmx1Test 49/87 Test #49: Pdb2gmx1Test ................................... Passed 0.96 sec Start 50: Pdb2gmx2Test 50/87 Test #50: Pdb2gmx2Test ................................... Passed 0.98 sec Start 51: Pdb2gmx3Test 51/87 Test #51: Pdb2gmx3Test ................................... Passed 2.72 sec Start 52: CorrelationsTest 52/87 Test #52: CorrelationsTest ............................... Passed 0.06 sec Start 53: AnalysisDataUnitTests 53/87 Test #53: AnalysisDataUnitTests .......................... Passed 0.03 sec Start 54: CoordinateIOTests 54/87 Test #54: CoordinateIOTests .............................. Passed 0.05 sec Start 55: TrajectoryAnalysisUnitTests 55/87 Test #55: TrajectoryAnalysisUnitTests .................... Passed 0.55 sec Start 56: EnergyAnalysisUnitTests 56/87 Test #56: EnergyAnalysisUnitTests ........................ Passed 0.04 sec Start 57: ToolUnitTests 57/87 Test #57: ToolUnitTests .................................. Passed 1.22 sec Start 58: FileIOTests 58/87 Test #58: FileIOTests .................................... Passed 0.02 sec Start 59: SelectionUnitTests 59/87 Test #59: SelectionUnitTests ............................. Passed 0.12 sec Start 60: MdrunOutputTests 60/87 Test #60: MdrunOutputTests ............................... Passed 0.09 sec Start 61: MdrunModulesTests 61/87 Test #61: MdrunModulesTests .............................. Passed 0.20 sec Start 62: MdrunIOTests 62/87 Test #62: MdrunIOTests ................................... Passed 0.69 sec Start 63: MdrunTestsOneRank 63/87 Test #63: MdrunTestsOneRank .............................. Passed 0.78 sec Start 64: MdrunTestsTwoRanks 64/87 Test #64: MdrunTestsTwoRanks ............................. Passed 59.61 sec Start 65: MdrunSingleRankAlgorithmsTests 65/87 Test #65: MdrunSingleRankAlgorithmsTests ................. Passed 0.19 sec Start 66: MdrunNonIntegratorTests 66/87 Test #66: MdrunNonIntegratorTests ........................ Passed 3.37 sec Start 67: MdrunTpiTests 67/87 Test #67: MdrunTpiTests .................................. Passed 0.50 sec Start 68: MdrunMpiTests 68/87 Test #68: MdrunMpiTests .................................. Passed 39.70 sec Start 69: MdrunMultiSimTests 69/87 Test #69: MdrunMultiSimTests ............................. Passed 0.01 sec Start 70: MdrunMultiSimReplexTests 70/87 Test #70: MdrunMultiSimReplexTests ....................... Passed 0.01 sec Start 71: MdrunMultiSimReplexEquivalenceTests 71/87 Test #71: MdrunMultiSimReplexEquivalenceTests ............ Passed 0.01 sec Start 72: MdrunMpi1RankPmeTests 72/87 Test #72: MdrunMpi1RankPmeTests .......................... Passed 0.13 sec Start 73: MdrunMpi2RankPmeTests 73/87 Test #73: MdrunMpi2RankPmeTests .......................... Passed 20.44 sec Start 74: MdrunMpiCoordinationBasicTestsOneRank 74/87 Test #74: MdrunMpiCoordinationBasicTestsOneRank .......... Passed 0.04 sec Start 75: MdrunMpiCoordinationBasicTestsTwoRanks 75/87 Test #75: MdrunMpiCoordinationBasicTestsTwoRanks ......... Passed 0.04 sec Start 76: MdrunMpiCoordinationCouplingTestsOneRank 76/87 Test #76: MdrunMpiCoordinationCouplingTestsOneRank ....... Passed 0.44 sec Start 77: MdrunMpiCoordinationCouplingTestsTwoRanks 77/87 Test #77: MdrunMpiCoordinationCouplingTestsTwoRanks ...... Passed 0.54 sec Start 78: MdrunMpiCoordinationConstraintsTestsOneRank 78/87 Test #78: MdrunMpiCoordinationConstraintsTestsOneRank .... Passed 12.53 sec Start 79: MdrunMpiCoordinationConstraintsTestsTwoRanks 79/87 Test #79: MdrunMpiCoordinationConstraintsTestsTwoRanks ... Passed 13.43 sec Start 80: MdrunFEPTests 80/87 Test #80: MdrunFEPTests .................................. Passed 0.57 sec Start 81: MdrunPullTests 81/87 Test #81: MdrunPullTests ................................. Passed 1.00 sec Start 82: MdrunSimulatorComparison 82/87 Test #82: MdrunSimulatorComparison ....................... Passed 7.08 sec Start 83: MdrunVirtualSiteTests 83/87 Test #83: MdrunVirtualSiteTests .......................... Passed 0.13 sec Start 84: regressiontests/complex 84/87 Test #84: regressiontests/complex ........................ Passed 61.35 sec Start 85: regressiontests/freeenergy 85/87 Test #85: regressiontests/freeenergy ..................... Passed 6.11 sec Start 86: regressiontests/rotation 86/87 Test #86: regressiontests/rotation ....................... Passed 3.77 sec Start 87: regressiontests/essentialdynamics 87/87 Test #87: regressiontests/essentialdynamics .............. Passed 1.19 sec 100% tests passed, 0 tests failed out of 87 Label Time Summary: GTest = 173.30 sec*proc (81 tests) IntegrationTest = 137.61 sec*proc (25 tests) MpiTest = 147.98 sec*proc (19 tests) QuickGpuTest = 44.63 sec*proc (17 tests) SlowTest = 34.16 sec*proc (13 tests) UnitTest = 1.53 sec*proc (43 tests) Total Test time (real) = 245.89 sec gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target run-ctest-nophys /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles/check.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/check.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' [100%] Built target check gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build/CMakeFiles 0 gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/serial_d/redhat-linux-build' + [[ '' = openmpi ]] + popd ~/build/BUILD/gromacs-2022.3 + test -n '' + for mpi in '' mpich openmpi + test -n mpich + module load mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + pushd mpich_d ~/build/BUILD/gromacs-2022.3/mpich_d ~/build/BUILD/gromacs-2022.3 + [[ mpich = openmpi ]] + /usr/bin/cmake --build redhat-linux-build -j4 --verbose --target check Change Dir: '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 check /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/gmake -f CMakeFiles/Makefile2 check gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles 96 /usr/bin/gmake -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/gmake -f src/external/googletest/googletest/CMakeFiles/gtest.dir/build.make src/external/googletest/googletest/CMakeFiles/gtest.dir/depend /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/external/googletest/googletest /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/external/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" Dependencies file "src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". Dependencies file "src/gromacs/selection/CMakeFiles/scanner.dir/parser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/compiler_depend.internal". Dependencies file "src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". Dependencies file "src/gromacs/selection/CMakeFiles/scanner.dir/scanner.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target mdrun_objlib gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build /usr/bin/gmake -f src/external/googletest/googletest/CMakeFiles/gtest.dir/build.make src/external/googletest/googletest/CMakeFiles/gtest.dir/build Consolidate compiler generated dependencies of target scanner gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/andersentemperaturecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/programs/CMakeFiles/mdrun_objlib.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/selection/CMakeFiles/scanner.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". [ 0%] Building CXX object src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wall -Wshadow -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=1 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/src/gtest-all.cc [ 0%] Built target mdrun_objlib Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend [ 0%] Built target scanner Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". /usr/bin/gmake -f src/gromacs/CMakeFiles/thread_mpi.dir/build.make src/gromacs/CMakeFiles/thread_mpi.dir/depend Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/firstorderpressurecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/errhandler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/build Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/nosehooverchains.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/simulatoralgorithm.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/statepropagatordata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/topologyholder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". 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[ 0%] Built target thread_mpi Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/velocityscalingtemperaturecoupling.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake "--color=" [ 0%] Built target release-version-info Consolidate compiler generated dependencies of target modularsimulator Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/eigensolver.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". Dependencies file "src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target linearalgebra gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 2%] Built target modularsimulator [ 2%] Built target linearalgebra /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/abstractdata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/analysisdata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/arraydata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/dataframe.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/analysisdata/datamodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/correlationgrid.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/correlationhistory.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/correlationtensor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/g96io.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmx_internal_xdr.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/gmxfio_xdr.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/groio.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/libxdrf.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/matio.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/fileio/md5.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdatoms.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdebin_bar.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/mdlib/mdoutf.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/mdlib/membed.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/pairsearch.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/nbnxm/prunekerneldispatch.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpformat.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helptopic.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/helpwritercontext.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/onlinehelp/rstparser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/abstractoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/abstractsection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/basicoptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/behaviorcollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/filenameoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/options.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsassigner.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/optionsvisitor.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/timeunitmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/options/treesupport.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/boxutilities.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/com.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/mshift.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbc_simd.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbcenums.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/pbcmethods.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pbcutil/rmpbc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/output.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pull_rotation.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullcoordexpressionparser.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/pullutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/pulling/transformationcoordinate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/random/seed.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/random/tabulatednormaldistribution.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/restraint/manager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/restraint/restraintmdmodule.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/centerofmass.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/compiler.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/evaluate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/indexutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/mempool.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/nbsearch.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/params.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/parsetree.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/poscalc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/position.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/scanner_internal.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectioncollection.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoption.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionbehavior.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selectionoptionmanager.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selelem.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selhelp.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selmethod.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/selvalue.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_compare.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_distance.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_insolidangle.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_keywords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_merge.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_permute.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_position.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_same.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/sm_simple.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/selection/symrec.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/simd/support.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/statistics/statistics.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/swap/swapcoords.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/cubicsplinetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/forcetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/quadraticsplinetable.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tables/splineutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidegpuusage.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/decidesimulationworkload.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/findallgputasks.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/taskassignment/reportgpuusage.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/timing/wallcycle.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/timing/walltime_accounting.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/check.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/convert_tpr.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/dump.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/eneconv.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/make_ndx.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/mk_angndx.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/tools/tune_pme.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/atomprop.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/atoms.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/atomsbuilder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/block.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/exclusionblocks.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/forcefieldparameters.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/idef.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/ifunc.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/index.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/invblock.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/topology/mtop_util.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules/extract_cluster.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules/freevolume.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/trajectoryanalysis/modules/msd.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/compare.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/coolstuff.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/cstringutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/datafilefinder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/directoryenumerator.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/errorcodes.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/errorformat.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/exceptions.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/gmxassert.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/gmxomp.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/ikeyvaluetreeerror.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/init.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/inmemoryserializer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/int64_to_int.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetree.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreemdpwriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreeserializer.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/keyvaluetreetransform.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/logger.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/loggerbuilder.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/message_string_collector.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/mpiinfo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/niceheader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/path.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/strconvert.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/strdb.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sycl_version_information.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sysinfo.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/textreader.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/textwriter.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/txtdump.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target libgromacs gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 62%] Built target libgromacs [ 62%] Linking CXX static library ../../../../lib/libgtest.a cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -P CMakeFiles/gtest.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 /usr/bin/ar qc 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-c /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/src/gmock-all.cc [ 62%] Linking CXX static library ../../../../lib/libgmock.a cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/external/googletest/googlemock && /usr/bin/cmake -P CMakeFiles/gmock.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/external/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libgmock.a "CMakeFiles/gmock.dir/src/gmock-all.cc.o" /usr/bin/ranlib ../../../../lib/libgmock.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 62%] Built target gmock /usr/bin/gmake -f src/testutils/CMakeFiles/testutils.dir/build.make src/testutils/CMakeFiles/testutils.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd 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/usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/mpi_printer.cpp.o -MF CMakeFiles/testutils.dir/mpi_printer.cpp.o.d -o CMakeFiles/testutils.dir/mpi_printer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/mpi_printer.cpp [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/mpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/mpitest.cpp.o -MF CMakeFiles/testutils.dir/mpitest.cpp.o.d -o CMakeFiles/testutils.dir/mpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/mpitest.cpp [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o -MF CMakeFiles/testutils.dir/refdata.cpp.o.d -o CMakeFiles/testutils.dir/refdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::(anonymous namespace)::MockLogTarget::gmock_writeEntry(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:62:5, inlined from 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.198941].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp: In member function 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:35: note: '' declared here 113 | EXPECT_CALL(target, writeEntry(testing::_)).Times(0); | ^ [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o -MF CMakeFiles/testutils.dir/refdata_xml.cpp.o.d -o CMakeFiles/testutils.dir/refdata_xml.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata_xml.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:48: In member function 'testing::internal::MatcherBase, std::allocator >*>::MatcherBase(testing::internal::MatcherBase, std::allocator >*> const&)', inlined from 'testing::Matcher, std::allocator >*>::Matcher(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextInputStream::gmock_readLine(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:71:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211524].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:43: note: '' declared here 90 | EXPECT_CALL(inputStream_, readLine(_)).WillRepeatedly(Invoke(this, &Impl::readInputLine)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextOutputStream::gmock_write(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:78:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211531].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:41: note: '' declared here 92 | EXPECT_CALL(outputStream_, write(_)).WillRepeatedly(Invoke(this, &Impl::addOutput)); | ^ [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/simulationdatabase.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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/usr/bin/gmake -f src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 63%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/interactivetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/interactivetest.cpp.o -MF CMakeFiles/testutils-test.dir/interactivetest.cpp.o.d -o CMakeFiles/testutils-test.dir/interactivetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/interactivetest.cpp [ 63%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/energyreader.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -MF CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o.d -o CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/mpitest.cpp [ 64%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/alignedallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/alignedallocator.cpp.o -MF CMakeFiles/utility-test.dir/alignedallocator.cpp.o.d -o CMakeFiles/utility-test.dir/alignedallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/alignedallocator.cpp [ 64%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -MF CMakeFiles/testutils-test.dir/refdata_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/refdata_tests.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" 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executable ../../../bin/testutils-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/testutils-mpi-test.dir/mpitest.cpp.o" "CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o" -o ../../../bin/testutils-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../lib/libtestutils.a ../../../lib/libgromacs_mpich_d.a ../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 64%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/moduletest.cpp [ 64%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/arrayref.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simulatorcomparison.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem 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-DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -MF CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/testasserts_tests.cpp [ 64%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/trajectorycomparison.cpp cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -MF CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/xvgtest_tests.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/testutils/tests/CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -MF CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o.d -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 64%] Linking CXX executable ../../../bin/testutils-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/testutils-test.dir/interactivetest.cpp.o" "CMakeFiles/testutils-test.dir/refdata_tests.cpp.o" "CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o" "CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o" "CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o" -o ../../../bin/testutils-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../lib/libtestutils.a ../../../lib/libgromacs_mpich_d.a ../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../lib/libtestutils.a ../../../lib/libtestutils.a ../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../lib/libgmock.a ../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 64%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 64%] Linking CXX static library ../../../../lib/libmdrun_test_infrastructure.a cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -P CMakeFiles/mdrun_test_infrastructure.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun_test_infrastructure.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrun_test_infrastructure.a CMakeFiles/mdrun_test_infrastructure.dir/energyreader.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o /usr/bin/ranlib ../../../../lib/libmdrun_test_infrastructure.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 64%] Built target mdrun_test_infrastructure [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask32.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" 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'/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 65%] Built target testutils-mpi-test /usr/bin/gmake -f src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f 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src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 65%] Linking CXX executable ../../../../bin/utility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o" "CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o -MF CMakeFiles/utility-test.dir/bitmask128.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask128.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 65%] Built target testutils-test /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 65%] Building CXX object src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxlib/nonbonded/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o -MF CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o.d -o CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests/nb_free_energy.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/cstringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/cstringutil.cpp.o -MF CMakeFiles/utility-test.dir/cstringutil.cpp.o.d -o CMakeFiles/utility-test.dir/cstringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/cstringutil.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o -MF CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o.d -o CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/defaultinitializationallocator.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o -MF CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o.d -o CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/enumerationhelpers.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -MF CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o.d -o CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/fixedcapacityvector.cpp [ 65%] Building CXX object src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxlib/nonbonded/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -MF CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o.d -o CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/inmemoryserializer.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 65%] Built target utility-mpi-test /usr/bin/gmake -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -MF CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o.d -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/calc_verletbuf.cpp [ 65%] Linking CXX executable ../../../../../bin/nonbonded-fep-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nonbonded-fep-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o" "CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/nonbonded-fep-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_mpich_d.a ../../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreeserializer.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calcvir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calcvir.cpp.o -MF CMakeFiles/mdlib-test.dir/calcvir.cpp.o.d -o CMakeFiles/mdlib-test.dir/calcvir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/calcvir.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o -MF CMakeFiles/mdlib-test.dir/constr.cpp.o.d -o CMakeFiles/mdlib-test.dir/constr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constr.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestdata.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreetransform.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o -MF CMakeFiles/utility-test.dir/listoflists.cpp.o.d -o CMakeFiles/utility-test.dir/listoflists.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/listoflists.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o -MF CMakeFiles/mdlib-test.dir/ebin.cpp.o.d -o CMakeFiles/mdlib-test.dir/ebin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/ebin.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -MF CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o.d -o CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energydrifttracker.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -MF CMakeFiles/mdlib-test.dir/energyoutput.cpp.o.d -o CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energyoutput.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o -MF CMakeFiles/mdlib-test.dir/expanded.cpp.o.d -o CMakeFiles/mdlib-test.dir/expanded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/expanded.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o -MF CMakeFiles/utility-test.dir/logger.cpp.o.d -o CMakeFiles/utility-test.dir/logger.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/logger.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -MF CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o.d -o CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/freeenergyparameters.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o.d -o CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/mdmodulesnotifier.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrog.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrog.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o -MF CMakeFiles/utility-test.dir/message_string_collector.cpp.o.d -o CMakeFiles/utility-test.dir/message_string_collector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/message_string_collector.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestdata.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast 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-I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser 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CMakeFiles/mdlib-test.dir/settletestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestdata.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -MF CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o.d -o CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/range.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o -MF CMakeFiles/mdlib-test.dir/shake.cpp.o.d -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/shake.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -MF CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o.d -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/simulationsignal.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o -MF CMakeFiles/utility-test.dir/strconvert.cpp.o.d -o CMakeFiles/utility-test.dir/strconvert.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp:45: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroups.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroups.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroups.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -MF CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o.d -o CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringtoenumvalueconverter.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroupscog.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o -MF CMakeFiles/utility-test.dir/stringutil.cpp.o.d -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringutil.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o -MF CMakeFiles/utility-test.dir/template_mp.cpp.o.d -o CMakeFiles/utility-test.dir/template_mp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/template_mp.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -MF CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o.d -o CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/wholemoleculetransform.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o -MF CMakeFiles/utility-test.dir/textreader.cpp.o.d -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textreader.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../bin/mdlib-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o" "CMakeFiles/mdlib-test.dir/calcvir.cpp.o" "CMakeFiles/mdlib-test.dir/constr.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/ebin.cpp.o" "CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o" "CMakeFiles/mdlib-test.dir/energyoutput.cpp.o" "CMakeFiles/mdlib-test.dir/expanded.cpp.o" "CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrog.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/settle.cpp.o" "CMakeFiles/mdlib-test.dir/settletestdata.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/shake.cpp.o" "CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o" "CMakeFiles/mdlib-test.dir/updategroups.cpp.o" "CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o" "CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdlib-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o -MF CMakeFiles/utility-test.dir/textwriter.cpp.o.d -o CMakeFiles/utility-test.dir/textwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textwriter.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o -MF CMakeFiles/utility-test.dir/typetraits.cpp.o.d -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/typetraits.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Built target nonbonded-fep-test /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o -MF CMakeFiles/awh-test.dir/awh_setup.cpp.o.d -o CMakeFiles/awh-test.dir/awh_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/awh_setup.cpp [ 67%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../bin/utility-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-test.dir/alignedallocator.cpp.o" "CMakeFiles/utility-test.dir/arrayref.cpp.o" "CMakeFiles/utility-test.dir/bitmask32.cpp.o" "CMakeFiles/utility-test.dir/bitmask64.cpp.o" "CMakeFiles/utility-test.dir/bitmask128.cpp.o" "CMakeFiles/utility-test.dir/cstringutil.cpp.o" "CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o" "CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o" "CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o" "CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o" "CMakeFiles/utility-test.dir/listoflists.cpp.o" "CMakeFiles/utility-test.dir/logger.cpp.o" "CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o" "CMakeFiles/utility-test.dir/message_string_collector.cpp.o" "CMakeFiles/utility-test.dir/path.cpp.o" "CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o" "CMakeFiles/utility-test.dir/range.cpp.o" "CMakeFiles/utility-test.dir/strconvert.cpp.o" "CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o" "CMakeFiles/utility-test.dir/stringutil.cpp.o" "CMakeFiles/utility-test.dir/template_mp.cpp.o" "CMakeFiles/utility-test.dir/textreader.cpp.o" "CMakeFiles/utility-test.dir/textwriter.cpp.o" "CMakeFiles/utility-test.dir/typetraits.cpp.o" "CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o -MF CMakeFiles/awh-test.dir/bias.cpp.o.d -o CMakeFiles/awh-test.dir/bias.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o -MF CMakeFiles/awh-test.dir/biasgrid.cpp.o.d -o CMakeFiles/awh-test.dir/biasgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasgrid.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o -MF CMakeFiles/awh-test.dir/biassharing.cpp.o.d -o CMakeFiles/awh-test.dir/biassharing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biassharing.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o -MF CMakeFiles/awh-test.dir/biasstate.cpp.o.d -o CMakeFiles/awh-test.dir/biasstate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasstate.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -MF CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o.d -o CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias_fep_lambda_state.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Built target mdlib-test /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfitting.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../../bin/awh-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/awh-test.dir/awh_setup.cpp.o" "CMakeFiles/awh-test.dir/bias.cpp.o" "CMakeFiles/awh-test.dir/biasgrid.cpp.o" "CMakeFiles/awh-test.dir/biassharing.cpp.o" "CMakeFiles/awh-test.dir/biasstate.cpp.o" "CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o" "CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/awh-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_mpich_d.a ../../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -MF 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-I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingforceprovider.cpp [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingoptions.cpp [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../../bin/density_fitting_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/density_fitting_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/density_fitting_applied_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_mpich_d.a ../../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Built target utility-test /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmminputgenerator.cpp [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmtopologypreprocessor.cpp [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmoptions.cpp [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -DGMX_CP2K=0 -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmforceprovider.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Built target awh-test /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -MF CMakeFiles/applied_forces-test.dir/electricfield.cpp.o.d -o CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests/electricfield.cpp [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmm.cpp [ 67%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../bin/applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/applied_forces-test.dir/electricfield.cpp.o" "CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/applied_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 68%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../../bin/qmmm_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/qmmm_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/qmmm_applied_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_mpich_d.a ../../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o -MF CMakeFiles/listed_forces-test.dir/bonded.cpp.o.d -o CMakeFiles/listed_forces-test.dir/bonded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/bonded.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Built target density_fitting_applied_forces-test /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -MF CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o.d -o CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp [ 68%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o -MF CMakeFiles/listed_forces-test.dir/pairs.cpp.o.d -o CMakeFiles/listed_forces-test.dir/pairs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/pairs.cpp [ 68%] Linking CXX executable ../../../../bin/nbnxm-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nbnxm-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o" "CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/nbnxm-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -MF CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o.d -o CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/position_restraints.cpp [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Built target applied_forces-test [ 68%] Linking CXX executable ../../../../bin/listed_forces-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/listed_forces-test.dir/bonded.cpp.o" "CMakeFiles/listed_forces-test.dir/pairs.cpp.o" "CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o" "CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/listed_forces-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Built target nbnxm-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.207740].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp: In member function 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:33: note: '' declared here 77 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockHelpTopic::writeHelpBase)); | ^ [ 68%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX static library ../../../../lib/libonlinehelp-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -P CMakeFiles/onlinehelp-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libonlinehelp-test-shared.a "CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o" "CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libonlinehelp-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Built target onlinehelp-test-shared /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o -MF CMakeFiles/domdec-test.dir/hashedmap.cpp.o.d -o CMakeFiles/domdec-test.dir/hashedmap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/hashedmap.cpp [ 69%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 69%] Linking CXX executable ../../../../bin/domdec-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-test.dir/hashedmap.cpp.o" "CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o" "CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 69%] Built target domdec-test /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 69%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 69%] Built target listed_forces-test /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd 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src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmebsplinetest.cpp /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 70%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o -MF CMakeFiles/fft-test.dir/fft.cpp.o.d -o CMakeFiles/fft-test.dir/fft.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fft/tests/fft.cpp [ 70%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 70%] Built target qmmm_applied_forces-test /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/clfftinitializer.cpp [ 70%] Linking CXX executable ../../../../bin/domdec-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o" "CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_availability.cpp [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -MF CMakeFiles/ewald-test.dir/pmegathertest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_stream_manager.cpp [ 70%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 70%] Linking CXX executable ../../../../bin/fft-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fft-test.dir/fft.cpp.o" "CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fft-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -MF CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/hostallocator.cpp [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -MF CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/pinnedmemorychecker.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -MF CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -MF CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/typecasts.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Linking CXX executable ../../../../bin/gpu_utils-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o" "CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o" "CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o" "CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o" "CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o" "CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o" "CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gpu_utils-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 71%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -MF CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o.d -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp [ 71%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o -MF CMakeFiles/ewald-test.dir/pme.cpp.o.d -o CMakeFiles/ewald-test.dir/pme.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pme.cpp [ 71%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 71%] Built target fft-test /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 71%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -MF CMakeFiles/hardware-test.dir/cpuinfo.cpp.o.d -o CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/cpuinfo.cpp [ 71%] Linking CXX executable ../../../../bin/ewald-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o" "CMakeFiles/ewald-test.dir/pmegathertest.cpp.o" "CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o" "CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o" "CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o" "CMakeFiles/ewald-test.dir/pme.cpp.o" "CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/ewald-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 71%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/hardwaretopology.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 71%] Built target domdec-mpi-test /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -MF CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o.d -o CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/arrayrefwithpadding.cpp [ 71%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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71%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -MF CMakeFiles/math-test.dir/coordinatetransformation.cpp.o.d -o CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/coordinatetransformation.cpp [ 71%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o -MF CMakeFiles/hardware-test.dir/device_management.cpp.o.d -o CMakeFiles/hardware-test.dir/device_management.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp [ 72%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto 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CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Linking CXX executable ../../../../bin/hardware-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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'/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Built target gpu_utils-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/dofit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/dofit.cpp.o -MF CMakeFiles/math-test.dir/dofit.cpp.o.d -o CMakeFiles/math-test.dir/dofit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/dofit.cpp gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -MF CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o.d -o CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/exponentialmovingaverage.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:36: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockThreadAffinityAccess::gmock_setCurrentThreadAffinityToCore(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:70:5, inlined from 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.241305].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp: In member function 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:50: note: '' declared here 59 | ON_CALL(*this, setCurrentThreadAffinityToCore(_)).WillByDefault(Return(true)); | ^ [ 73%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o -MF CMakeFiles/math-test.dir/functions.cpp.o.d -o CMakeFiles/math-test.dir/functions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/functions.cpp [ 73%] Linking CXX static library ../../../../lib/libmdrunutility-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -P CMakeFiles/mdrunutility-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrunutility-test-shared.a "CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o" "CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libmdrunutility-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Built target mdrunutility-test-shared /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build.make src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -MF CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o.d -o CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/accessor_policy.cpp [ 73%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o -MF CMakeFiles/mdspan-test.dir/extents.cpp.o.d -o CMakeFiles/mdspan-test.dir/extents.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/extents.cpp [ 73%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extensions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extensions.cpp.o -MF CMakeFiles/mdspan-test.dir/extensions.cpp.o.d -o CMakeFiles/mdspan-test.dir/extensions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/extensions.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o -MF CMakeFiles/math-test.dir/gausstransform.cpp.o.d -o CMakeFiles/math-test.dir/gausstransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/gausstransform.cpp [ 73%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o -MF CMakeFiles/mdspan-test.dir/layouts.cpp.o.d -o CMakeFiles/mdspan-test.dir/layouts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/layouts.cpp [ 73%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o -MF CMakeFiles/mdspan-test.dir/mdspan.cpp.o.d -o CMakeFiles/mdspan-test.dir/mdspan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/mdspan.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o -MF CMakeFiles/math-test.dir/densityfittingforce.cpp.o.d -o CMakeFiles/math-test.dir/densityfittingforce.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfittingforce.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/invertmatrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/invertmatrix.cpp.o -MF CMakeFiles/math-test.dir/invertmatrix.cpp.o.d -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/invertmatrix.cpp [ 73%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Built target ewald-test /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/DependInfo.cmake "--color=" [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o -MF CMakeFiles/math-test.dir/matrix.cpp.o.d -o CMakeFiles/math-test.dir/matrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/matrix.cpp gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o -MF CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o.d -o CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/observablesreducer.cpp [ 73%] Linking CXX executable ../../../../bin/mdspan-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdspan-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o" "CMakeFiles/mdspan-test.dir/extents.cpp.o" "CMakeFiles/mdspan-test.dir/extensions.cpp.o" "CMakeFiles/mdspan-test.dir/layouts.cpp.o" "CMakeFiles/mdspan-test.dir/mdspan.cpp.o" "CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdspan-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o -MF CMakeFiles/math-test.dir/multidimarray.cpp.o.d -o CMakeFiles/math-test.dir/multidimarray.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/multidimarray.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Built target hardware-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpformat.cpp [ 73%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp [ 75%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o -MF CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o.d -o CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/checkpointdata.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o -MF CMakeFiles/math-test.dir/neldermead.cpp.o.d -o CMakeFiles/math-test.dir/neldermead.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/neldermead.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:47: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.220014].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:36: note: '' declared here 106 | EXPECT_CALL(firstSub, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.219159].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:38: note: '' declared here 95 | EXPECT_CALL(rootTopic_, writeHelp(_)); | ^ [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpwritercontext.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o -MF CMakeFiles/math-test.dir/optimization.cpp.o.d -o CMakeFiles/math-test.dir/optimization.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/optimization.cpp [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Linking CXX executable ../../../../bin/onlinehelp-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o" "CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/onlinehelp-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a [ 76%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o -MF CMakeFiles/math-test.dir/paddedvector.cpp.o.d -o CMakeFiles/math-test.dir/paddedvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/paddedvector.cpp [ 76%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -MF CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o.d -o CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/forcebuffers.cpp [ 76%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -MF CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o.d -o CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/multipletimestepping.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 76%] Built target mdspan-test /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 76%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -MF CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o.d -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp [ 76%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 76%] Linking CXX executable ../../../../bin/mdtypes-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdtypes-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o" "CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o" "CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o" "CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o" "CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdtypes-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:49: In member function 'testing::internal::MatcherBase, std::allocator > const&>::MatcherBase(testing::internal::MatcherBase, std::allocator > const&> const&)', inlined from 'testing::Matcher, std::allocator > const&>::Matcher(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:514:18, inlined from '(anonymous namespace)::MockOptionStorage::gmock_convertValue(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:113:5, inlined from '__ct ' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:5, inlined from '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:138:43: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.394537].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp: In member function '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:32: note: '' declared here 147 | ON_CALL(*this, convertValue(_)).WillByDefault(WithArg<0>(Invoke(this, &MockOptionStorage::addValue))); | ^ [ 76%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o -MF CMakeFiles/options-test.dir/filenameoption.cpp.o.d -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/filenameoption.cpp [ 76%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o -MF CMakeFiles/math-test.dir/vectypes.cpp.o.d -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/vectypes.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 76%] Built target onlinehelp-test /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 77%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o -MF CMakeFiles/pbcutil-test.dir/com.cpp.o.d -o CMakeFiles/pbcutil-test.dir/com.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/com.cpp [ 77%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -MF CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o.d -o CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/filenameoptionmanager.cpp [ 77%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Linking CXX executable ../../../../bin/math-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o" "CMakeFiles/math-test.dir/coordinatetransformation.cpp.o" "CMakeFiles/math-test.dir/densityfit.cpp.o" "CMakeFiles/math-test.dir/dofit.cpp.o" "CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o" "CMakeFiles/math-test.dir/functions.cpp.o" "CMakeFiles/math-test.dir/gausstransform.cpp.o" "CMakeFiles/math-test.dir/densityfittingforce.cpp.o" "CMakeFiles/math-test.dir/invertmatrix.cpp.o" "CMakeFiles/math-test.dir/matrix.cpp.o" "CMakeFiles/math-test.dir/multidimarray.cpp.o" "CMakeFiles/math-test.dir/neldermead.cpp.o" "CMakeFiles/math-test.dir/optimization.cpp.o" "CMakeFiles/math-test.dir/paddedvector.cpp.o" "CMakeFiles/math-test.dir/vectypes.cpp.o" "CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/math-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 78%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o -MF CMakeFiles/options-test.dir/option.cpp.o.d -o CMakeFiles/options-test.dir/option.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/option.cpp [ 78%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o -MF CMakeFiles/pbcutil-test.dir/mshift.cpp.o.d -o CMakeFiles/pbcutil-test.dir/mshift.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/mshift.cpp [ 78%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o -MF CMakeFiles/options-test.dir/optionsassigner.cpp.o.d -o CMakeFiles/options-test.dir/optionsassigner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/optionsassigner.cpp [ 78%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o -MF CMakeFiles/pbcutil-test.dir/pbc.cpp.o.d -o CMakeFiles/pbcutil-test.dir/pbc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbc.cpp [ 78%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -MF CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o.d -o CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbcenums.cpp [ 78%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Linking CXX executable ../../../../bin/pbcutil-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbcutil-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pbcutil-test.dir/com.cpp.o" "CMakeFiles/pbcutil-test.dir/mshift.cpp.o" "CMakeFiles/pbcutil-test.dir/pbc.cpp.o" "CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o" "CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pbcutil-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 78%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o -MF CMakeFiles/options-test.dir/timeunitmanager.cpp.o.d -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/timeunitmanager.cpp [ 78%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/treesupport.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/treesupport.cpp.o -MF CMakeFiles/options-test.dir/treesupport.cpp.o.d -o CMakeFiles/options-test.dir/treesupport.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/treesupport.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 78%] Built target mdtypes-test /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/CMakeFiles/random-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 78%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/exponentialdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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src/gromacs/random/tests/CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -MF CMakeFiles/random-test.dir/exponentialdistribution.cpp.o.d -o CMakeFiles/random-test.dir/exponentialdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/exponentialdistribution.cpp [ 78%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o -MF CMakeFiles/random-test.dir/gammadistribution.cpp.o.d -o CMakeFiles/random-test.dir/gammadistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/gammadistribution.cpp [ 78%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o -MF CMakeFiles/random-test.dir/normaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/normaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/normaldistribution.cpp [ 79%] Linking CXX executable ../../../../bin/options-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o" "CMakeFiles/options-test.dir/filenameoption.cpp.o" "CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o" "CMakeFiles/options-test.dir/option.cpp.o" "CMakeFiles/options-test.dir/optionsassigner.cpp.o" "CMakeFiles/options-test.dir/repeatingsection.cpp.o" "CMakeFiles/options-test.dir/timeunitmanager.cpp.o" "CMakeFiles/options-test.dir/treesupport.cpp.o" "CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/options-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o -MF CMakeFiles/random-test.dir/seed.cpp.o.d -o CMakeFiles/random-test.dir/seed.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/seed.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -MF CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/tabulatednormaldistribution.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Built target pbcutil-test /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/restraint/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/restraint/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o -MF CMakeFiles/restraintpotential-test.dir/manager.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests/manager.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o -MF CMakeFiles/random-test.dir/threefry.cpp.o.d -o CMakeFiles/random-test.dir/threefry.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/threefry.cpp [ 79%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/restraint/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/restraint/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Linking CXX executable ../../../../bin/restraintpotential-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/restraintpotential-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/restraintpotential-test.dir/manager.cpp.o" "CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/restraintpotential-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/random-test.dir/uniformintdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformintdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformintdistribution.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformrealdistribution.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Linking CXX executable ../../../../bin/random-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/random-test.dir/exponentialdistribution.cpp.o" "CMakeFiles/random-test.dir/gammadistribution.cpp.o" "CMakeFiles/random-test.dir/normaldistribution.cpp.o" "CMakeFiles/random-test.dir/seed.cpp.o" "CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o" "CMakeFiles/random-test.dir/threefry.cpp.o" "CMakeFiles/random-test.dir/uniformintdistribution.cpp.o" "CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o" "CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/random-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Built target math-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Built target restraintpotential-test /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/splinetable.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tables/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tables/tests/CMakeFiles/table-test.dir/splinetable.cpp.o -MF CMakeFiles/table-test.dir/splinetable.cpp.o.d -o CMakeFiles/table-test.dir/splinetable.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests/splinetable.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Built target random-test /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests/usergpuids.cpp [ 79%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tables/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Linking CXX executable ../../../../bin/taskassignment-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o" "CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/taskassignment-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 79%] Linking CXX executable ../../../../bin/table-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/table-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/table-test.dir/splinetable.cpp.o" "CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/table-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 79%] Built target options-test /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/timing/tests/CMakeFiles/timing-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 80%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/timing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/timing/tests/CMakeFiles/timing-test.dir/timing.cpp.o -MF CMakeFiles/timing-test.dir/timing.cpp.o.d -o CMakeFiles/timing-test.dir/timing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/tests/timing.cpp [ 80%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Linking CXX executable ../../../../bin/timing-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/timing-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/timing-test.dir/timing.cpp.o" "CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/timing-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 80%] Built target table-test /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests/CMakeFiles/topology-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -MF CMakeFiles/topology-test.dir/exclusionblocks.cpp.o.d -o CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/exclusionblocks.cpp [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/idef.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/idef.cpp.o -MF CMakeFiles/topology-test.dir/idef.cpp.o.d -o CMakeFiles/topology-test.dir/idef.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/idef.cpp [ 80%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o -MF CMakeFiles/topology-test.dir/mtop.cpp.o.d -o CMakeFiles/topology-test.dir/mtop.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/mtop.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 80%] Built target timing-test /usr/bin/gmake -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pulling/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 80%] Building CXX object src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/pull.cpp.o gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pulling/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/pull.cpp.o -MF CMakeFiles/pull-test.dir/pull.cpp.o.d -o CMakeFiles/pull-test.dir/pull.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pulling/tests/pull.cpp [ 80%] Built target taskassignment-test /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/CMakeFiles/simd-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build.make src/gromacs/simd/tests/CMakeFiles/simd-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 81%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o -MF CMakeFiles/simd-test.dir/base.cpp.o.d -o CMakeFiles/simd-test.dir/base.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/base.cpp [ 81%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o -MF CMakeFiles/topology-test.dir/symtab.cpp.o.d -o CMakeFiles/topology-test.dir/symtab.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/symtab.cpp [ 81%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -MF CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o.d -o CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/bootstrap_loadstore.cpp [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/topsort.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/topsort.cpp.o -MF CMakeFiles/topology-test.dir/topsort.cpp.o.d -o CMakeFiles/topology-test.dir/topsort.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/topsort.cpp [ 82%] Building CXX object src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pulling/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/pull-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pull-test.dir/pull.cpp.o" "CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pull-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lmuparser /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o -MF CMakeFiles/simd-test.dir/scalar.cpp.o.d -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar.cpp [ 82%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/topology-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/topology-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/topology-test.dir/exclusionblocks.cpp.o" "CMakeFiles/topology-test.dir/idef.cpp.o" "CMakeFiles/topology-test.dir/mtop.cpp.o" "CMakeFiles/topology-test.dir/symtab.cpp.o" "CMakeFiles/topology-test.dir/topsort.cpp.o" "CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/topology-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o -MF CMakeFiles/simd-test.dir/scalar_util.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_util.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o -MF CMakeFiles/simd-test.dir/scalar_math.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_math.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o -MF CMakeFiles/simd-test.dir/simd.cpp.o.d -o CMakeFiles/simd-test.dir/simd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 82%] Built target pull-test /usr/bin/gmake -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/compat/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/compat/tests/CMakeFiles/compat-test.dir/mp11.cpp.o -MF CMakeFiles/compat-test.dir/mp11.cpp.o.d -o CMakeFiles/compat-test.dir/mp11.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests/mp11.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint_util.cpp [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/pointers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/compat/tests/CMakeFiles/compat-test.dir/pointers.cpp.o -MF CMakeFiles/compat-test.dir/pointers.cpp.o.d -o CMakeFiles/compat-test.dir/pointers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests/pointers.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o -MF CMakeFiles/simd-test.dir/simd_integer.cpp.o.d -o CMakeFiles/simd-test.dir/simd_integer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_integer.cpp [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o -MF CMakeFiles/simd-test.dir/simd_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp [ 82%] Linking CXX executable ../../../../bin/compat-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/compat-test.dir/mp11.cpp.o" "CMakeFiles/compat-test.dir/pointers.cpp.o" "CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/compat-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In static member function 'static std::vector > gmx::test::SimdMathTest::generateTestPoints(Range, std::size_t)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^~~~~~~~~~~~ [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_memory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast 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-I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_vector_operations.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o -MF CMakeFiles/simd-test.dir/simd4.cpp.o.d -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o -MF CMakeFiles/simd-test.dir/simd4_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_math.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_vector_operations.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o -MF CMakeFiles/gmxana-test.dir/entropy.cpp.o.d -o CMakeFiles/gmxana-test.dir/entropy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/entropy.cpp [ 83%] Linking CXX executable ../../../../bin/simd-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/simd-test.dir/base.cpp.o" "CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o" "CMakeFiles/simd-test.dir/scalar.cpp.o" "CMakeFiles/simd-test.dir/scalar_util.cpp.o" "CMakeFiles/simd-test.dir/scalar_math.cpp.o" "CMakeFiles/simd-test.dir/simd.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o" "CMakeFiles/simd-test.dir/simd_integer.cpp.o" "CMakeFiles/simd-test.dir/simd_math.cpp.o" "CMakeFiles/simd-test.dir/simd_memory.cpp.o" "CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/simd4.cpp.o" "CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd4_math.cpp.o" "CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/simd-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 83%] Built target compat-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build [ 83%] Built target topology-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/DependInfo.cmake "--color=" [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/editconf.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_chi.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genconf.cpp [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_mindist.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genion.cpp [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_traj.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genrestr.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Linking CXX executable ../../../../bin/pdb2gmx1-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx1-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx1-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_atomtype.cpp [ 83%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Linking CXX executable ../../../../bin/gmxana-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxana-test.dir/entropy.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o" "CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o" "CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxana-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_bond_atomtype.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/grompp_directives.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/insert_molecules.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/readir.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/solvate.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/topdirs.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Linking CXX executable ../../../../bin/gmxpreprocess-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxpreprocess-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In member function 'compareSimdMathFunction.constprop': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:309:87: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 309 | std::vector testPoints = generateTestPoints(compareSettings.range, s_nPoints); | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In function 'generateTestPoints': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 84%] Built target simd-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/depend /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/DependInfo.cmake "--color=" /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Linking CXX executable ../../../../bin/pdb2gmx2-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx2-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx2-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 84%] Built target pdb2gmx1-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 84%] Built target gmxana-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 85%] Linking CXX executable ../../../../bin/pdb2gmx3-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx3-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx3-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 85%] Built target pdb2gmx2-test /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 85%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o -MF CMakeFiles/correlations-test.dir/autocorr.cpp.o.d -o CMakeFiles/correlations-test.dir/autocorr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/autocorr.cpp [ 85%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o -MF CMakeFiles/correlations-test.dir/expfit.cpp.o.d -o CMakeFiles/correlations-test.dir/expfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/expfit.cpp [ 85%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem 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src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -MF CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o.d -o CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/correlations-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/correlations-test.dir/autocorr.cpp.o" "CMakeFiles/correlations-test.dir/correlationdataset.cpp.o" "CMakeFiles/correlations-test.dir/expfit.cpp.o" "CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o" "CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/correlations-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 86%] Built target correlations-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 86%] Built target gmxpreprocess-test /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/outputadaptercontainer.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o -MF CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o.d -o CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/outputadapters.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228063].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228064].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_dataStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:73:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237615].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:35: note: '' declared here 579 | EXPECT_CALL(*this, dataStarted(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237620].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:40: note: '' declared here 583 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237628].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:47: note: '' declared here 589 | EXPECT_CALL(*this, pointsAdded(_)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237636].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:41: note: '' declared here 593 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238074].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:40: note: '' declared here 617 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238109].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:43: note: '' declared here 621 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238382].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:41: note: '' declared here 623 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o -MF CMakeFiles/coordinateio-test.dir/requirements.cpp.o.d -o CMakeFiles/coordinateio-test.dir/requirements.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/requirements.cpp In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237552].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:44: note: '' declared here 551 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237570].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:47: note: '' declared here 557 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237575].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:45: note: '' declared here 559 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ [ 87%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 87%] Built target pdb2gmx3-test [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o -MF CMakeFiles/coordinateio-test.dir/setatoms.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setatoms.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setatoms.cpp /usr/bin/gmake -f 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-I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard 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../../../../lib/libanalysisdata-test-shared.a "CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libanalysisdata-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 87%] Built target analysisdata-test-shared /usr/bin/gmake -f src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build.make src/gromacs/tools/tests/CMakeFiles/tool-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/dump.cpp.o -MF CMakeFiles/tool-test.dir/dump.cpp.o.d -o CMakeFiles/tool-test.dir/dump.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/dump.cpp [ 87%] Building CXX object src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/energyanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 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CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer 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-I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setbothtime.cpp [ 87%] Linking CXX executable ../../../../bin/energyanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/energyanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/energyanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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/usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o -MF CMakeFiles/tool-test.dir/report_methods.cpp.o.d -o CMakeFiles/tool-test.dir/report_methods.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/report_methods.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setstarttime.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -MF CMakeFiles/coordinateio-test.dir/settimestep.cpp.o.d -o CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/settimestep.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o -MF CMakeFiles/coordinateio-test.dir/testmodule.cpp.o.d -o CMakeFiles/coordinateio-test.dir/testmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/testmodule.cpp [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o -MF CMakeFiles/tool-test.dir/trjconv.cpp.o.d -o CMakeFiles/tool-test.dir/trjconv.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/trjconv.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o -MF CMakeFiles/tool-test.dir/convert-tpr.cpp.o.d -o CMakeFiles/tool-test.dir/convert-tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/convert-tpr.cpp [ 87%] Linking CXX executable ../../../../bin/coordinateio-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/coordinateio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/coordinateio-test.dir/builder.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o" "CMakeFiles/coordinateio-test.dir/requirements.cpp.o" "CMakeFiles/coordinateio-test.dir/setatoms.cpp.o" "CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o" "CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o" "CMakeFiles/coordinateio-test.dir/settimestep.cpp.o" "CMakeFiles/coordinateio-test.dir/testmodule.cpp.o" "CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/coordinateio-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Linking CXX executable ../../../../bin/tool-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tool-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/tool-test.dir/dump.cpp.o" "CMakeFiles/tool-test.dir/helpwriting.cpp.o" "CMakeFiles/tool-test.dir/report_methods.cpp.o" "CMakeFiles/tool-test.dir/trjconv.cpp.o" "CMakeFiles/tool-test.dir/convert-tpr.cpp.o" "CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/tool-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 87%] Built target energyanalysis-test /usr/bin/gmake -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 87%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/checkpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o -MF CMakeFiles/fileio-test.dir/confio.cpp.o.d -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/confio.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/filemd5.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/filemd5.cpp.o -MF CMakeFiles/fileio-test.dir/filemd5.cpp.o.d -o CMakeFiles/fileio-test.dir/filemd5.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/filemd5.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcserializer.cpp.o -MF CMakeFiles/fileio-test.dir/mrcserializer.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcserializer.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -MF CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcdensitymapheader.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/readinp.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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-funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o -MF CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o.d -o CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/fileioxdrserializer.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o -MF CMakeFiles/fileio-test.dir/tngio.cpp.o.d -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/tngio.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY 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-fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o -MF CMakeFiles/fileio-test.dir/xvgio.cpp.o.d -o CMakeFiles/fileio-test.dir/xvgio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/xvgio.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/fileio-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fileio-test.dir/checkpoint.cpp.o" "CMakeFiles/fileio-test.dir/confio.cpp.o" "CMakeFiles/fileio-test.dir/filemd5.cpp.o" "CMakeFiles/fileio-test.dir/mrcserializer.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o" "CMakeFiles/fileio-test.dir/readinp.cpp.o" "CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o" "CMakeFiles/fileio-test.dir/tngio.cpp.o" "CMakeFiles/fileio-test.dir/xvgio.cpp.o" "CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fileio-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 88%] Built target coordinateio-test /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/indexutil.cpp.o -MF CMakeFiles/selection-test.dir/indexutil.cpp.o.d -o CMakeFiles/selection-test.dir/indexutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/indexutil.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 88%] Built target tool-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 88%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o -MF CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/compressed_x_output.cpp [ 88%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o -MF CMakeFiles/selection-test.dir/nbsearch.cpp.o.d -o CMakeFiles/selection-test.dir/nbsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/nbsearch.cpp [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o -MF CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/helpwriting.cpp [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o -MF CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/outputfiles.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o -MF CMakeFiles/selection-test.dir/poscalc.cpp.o.d -o CMakeFiles/selection-test.dir/poscalc.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/poscalc.cpp [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/trajectory_writing.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o -MF CMakeFiles/selection-test.dir/selectioncollection.cpp.o.d -o CMakeFiles/selection-test.dir/selectioncollection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectioncollection.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o -MF CMakeFiles/selection-test.dir/selectionoption.cpp.o.d -o CMakeFiles/selection-test.dir/selectionoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectionoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 89%] Built target fileio-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 89%] Linking CXX executable ../../../../bin/mdrun-output-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-output-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o" "CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o" "CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o" "CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o" "CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-output-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/interactiveMD.cpp [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/mimic.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o -MF CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/checkpoint.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-modules-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-modules-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o" "CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o" "CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o" "CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-modules-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 90%] Linking CXX executable ../../../../bin/selection-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/selection-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/selection-test.dir/indexutil.cpp.o" "CMakeFiles/selection-test.dir/nbsearch.cpp.o" "CMakeFiles/selection-test.dir/poscalc.cpp.o" "CMakeFiles/selection-test.dir/selectioncollection.cpp.o" "CMakeFiles/selection-test.dir/selectionoption.cpp.o" "CMakeFiles/selection-test.dir/toputils.cpp.o" "CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/selection-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -MF CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/exactcontinuation.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o -MF CMakeFiles/mdrun-io-test.dir/grompp.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/grompp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/grompp.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o cd 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src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o -MF CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/initialconstraints.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/termination.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/termination.cpp.o -MF CMakeFiles/mdrun-io-test.dir/termination.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/termination.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/termination.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-io-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-io-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o" "CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o" "CMakeFiles/mdrun-io-test.dir/grompp.cpp.o" "CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o" "CMakeFiles/mdrun-io-test.dir/termination.cpp.o" "CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-io-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 90%] Built target selection-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -MF CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o.d -o CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multiple_time_stepping.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -MF CMakeFiles/mdrun-test.dir/swapcoords.cpp.o.d -o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/swapcoords.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -MF CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o.d -o CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tabulated_bonded_interactions.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/freezegroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/freezegroups.cpp.o -MF CMakeFiles/mdrun-test.dir/freezegroups.cpp.o.d -o CMakeFiles/mdrun-test.dir/freezegroups.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/freezegroups.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o -MF CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o.d -o CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/constantacceleration.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Linking CXX executable ../../../../bin/mdrun-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o" "CMakeFiles/mdrun-test.dir/swapcoords.cpp.o" "CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o" "CMakeFiles/mdrun-test.dir/freezegroups.cpp.o" "CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o" "CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 90%] Built target mdrun-modules-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o -MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/ewaldsurfaceterm.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 90%] Built target mdrun-output-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests 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-DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o -MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/orires.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-single-rank-algorithms-test cd 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"CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-single-rank-algorithms-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/nonbonded_bench.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/normalmodes.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/rerun.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-non-integrator-test cd 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"CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-non-integrator-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 91%] Built target mdrun-io-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -MF CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o.d -o CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tpitest.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 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CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-tpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-tpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o" "CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-tpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 91%] Built target mdrun-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/mimic.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o" "CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 91%] Built target mdrun-single-rank-algorithms-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-multisim-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto 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/usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 92%] Built target mdrun-mpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange_equivalence.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-equivalence-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-equivalence-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 92%] Built target mdrun-multisim-replex-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -MF CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o.d -o CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pmetest.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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../../../../bin/mdrun-mpi-pme-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-pme-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o" "CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-pme-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Built target mdrun-multisim-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_basic.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-basic-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-basic-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-basic-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Built target mdrun-multisim-replex-equivalence-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_coupling.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Built target mdrun-mpi-pme-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-coupling-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-coupling-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_constraints.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-constraints-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-constraints-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 93%] Built target mdrun-mpi-coordination-basic-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o -MF CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o.d -o CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/freeenergy.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/pull.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -MF CMakeFiles/mdrun-pull-test.dir/pull.cpp.o.d -o CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pull.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 94%] Built target mdrun-mpi-coordination-coupling-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o -MF CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o.d -o CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simulator.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 94%] Built target mdrun-mpi-coordination-constraints-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/virtualsites.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-fep-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-fep-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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/usr/lib64/mpich/lib/libmpi.so [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-simulator-comparison-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-simulator-comparison-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o" "CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-simulator-comparison-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-vsites-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-vsites-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o" "CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-vsites-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-pull-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-pull-test.dir/pull.cpp.o" "CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-pull-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 95%] Built target mdrun-fep-test /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 95%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255580].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255581].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256649].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256650].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256653].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:34: note: '' declared here 140 | EXPECT_CALL(topic1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256656].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:32: note: '' declared here 141 | EXPECT_CALL(sub1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256659].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:32: note: '' declared here 142 | EXPECT_CALL(sub2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256662].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:32: note: '' declared here 143 | EXPECT_CALL(sub3, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256665].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:34: note: '' declared here 144 | EXPECT_CALL(topic2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.254599].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:33: note: '' declared here 92 | EXPECT_CALL(topic, writeHelp(_)); | ^ [ 95%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 95%] Built target mdrun-simulator-comparison-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 96%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -MF CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Built target mdrun-pull-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity_mpi.cpp [ 97%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Built target mdrun-vsites-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -MF CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/analysisdata.cpp [ 97%] Linking CXX executable ../../../../bin/mdrunutility-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o" "CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243854].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:32: note: '' declared here 116 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243700].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:32: note: '' declared here 101 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.242871].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:32: note: '' declared here 86 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240024].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:27: note: '' declared here 71 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240768].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240769].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244202].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:27: note: '' declared here 148 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244205].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244206].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244046].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:31: note: '' declared here 131 | EXPECT_CALL(mod, writeHelp(_)); | ^ [ 97%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp [ 97%] Linking CXX executable ../../../../bin/mdrunutility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o" "CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-mpi-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:106:5, inlined from 'gmx::test::MockOptionsModule::MockOptionsModule()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249346].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockOptionsModule::MockOptionsModule()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:24: note: '' declared here 113 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249218].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:24: note: '' declared here 89 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249224].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:29: note: '' declared here 90 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockModule::checkHelpContext)); | ^ [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineparser.cpp [ 97%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -MF CMakeFiles/analysisdata-test.dir/arraydata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/arraydata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/arraydata.cpp [ 97%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/average.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o -MF CMakeFiles/commandline-test.dir/pargs.cpp.o.d -o CMakeFiles/commandline-test.dir/pargs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/pargs.cpp [ 97%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -MF CMakeFiles/analysisdata-test.dir/lifetime.cpp.o.d -o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/lifetime.cpp [ 97%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Linking CXX executable ../../../../bin/analysisdata-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o" "CMakeFiles/analysisdata-test.dir/arraydata.cpp.o" "CMakeFiles/analysisdata-test.dir/average.cpp.o" "CMakeFiles/analysisdata-test.dir/histogram.cpp.o" "CMakeFiles/analysisdata-test.dir/lifetime.cpp.o" "CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/analysisdata-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a [ 97%] Linking CXX executable ../../../../bin/commandline-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o" "CMakeFiles/commandline-test.dir/filenm.cpp.o" "CMakeFiles/commandline-test.dir/pargs.cpp.o" "CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/commandline-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Built target mdrunutility-test /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/moduletest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Built target mdrunutility-mpi-test [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/angle.cpp [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/clustsize.cpp [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280633].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280634].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.283875].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.283876].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/convert_trj.cpp [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/distance.cpp [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/extract_cluster.cpp [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/freevolume.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 97%] Built target commandline-test [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/msd.cpp [ 97%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/pairdist.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/rdf.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/sasa.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/select.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/topologyinformation.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 98%] Built target analysisdata-test [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/trajectory.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/unionfind.cpp [ 98%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/mpich-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/trajectoryanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/trajectoryanalysis-test -Wl,-rpath,/usr/lib64/mpich/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a ../../../../lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_mpich_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 98%] Built target trajectoryanalysis-test /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles/tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [ 98%] Built target tests /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Running all tests except physical validation /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build Start 1: TestUtilsUnitTests 1/73 Test #1: TestUtilsUnitTests ............................. Passed 0.30 sec Start 2: TestUtilsMpiUnitTests 2/73 Test #2: TestUtilsMpiUnitTests .......................... Passed 0.26 sec Start 3: UtilityUnitTests 3/73 Test #3: UtilityUnitTests ............................... Passed 0.28 sec Start 4: UtilityMpiUnitTests 4/73 Test #4: UtilityMpiUnitTests ............................ Passed 0.15 sec Start 5: GmxlibTests 5/73 Test #5: GmxlibTests .................................... Passed 0.20 sec Start 6: MdlibUnitTest 6/73 Test #6: MdlibUnitTest .................................. Passed 0.33 sec Start 7: AwhTest 7/73 Test #7: AwhTest ........................................ Passed 0.20 sec Start 8: DensityFittingAppliedForcesUnitTest 8/73 Test #8: DensityFittingAppliedForcesUnitTest ............ Passed 0.18 sec Start 9: QMMMAppliedForcesUnitTest 9/73 Test #9: QMMMAppliedForcesUnitTest ...................... Passed 0.35 sec Start 10: AppliedForcesUnitTest 10/73 Test #10: AppliedForcesUnitTest .......................... Passed 0.15 sec Start 11: ListedForcesTest 11/73 Test #11: ListedForcesTest ............................... Passed 0.19 sec Start 12: NbnxmTests 12/73 Test #12: NbnxmTests ..................................... Passed 0.14 sec Start 13: CommandLineUnitTests 13/73 Test #13: CommandLineUnitTests ........................... Passed 0.08 sec Start 14: DomDecTests 14/73 Test #14: DomDecTests .................................... Passed 0.13 sec Start 15: DomDecMpiTests 15/73 Test #15: DomDecMpiTests ................................. Passed 0.23 sec Start 16: EwaldUnitTests 16/73 Test #16: EwaldUnitTests ................................. Passed 0.38 sec Start 17: FFTUnitTests 17/73 Test #17: FFTUnitTests ................................... Passed 0.20 sec Start 18: GpuUtilsUnitTests 18/73 Test #18: GpuUtilsUnitTests .............................. Passed 0.17 sec Start 19: HardwareUnitTests 19/73 Test #19: HardwareUnitTests .............................. Passed 0.20 sec Start 20: MathUnitTests 20/73 Test #20: MathUnitTests .................................. Passed 0.27 sec Start 21: MdrunUtilityUnitTests 21/73 Test #21: MdrunUtilityUnitTests .......................... Passed 0.07 sec Start 22: MdrunUtilityMpiUnitTests 22/73 Test #22: MdrunUtilityMpiUnitTests ....................... Passed 0.09 sec Start 23: MDSpanTests 23/73 Test #23: MDSpanTests .................................... Passed 0.16 sec Start 24: MdtypesUnitTest 24/73 Test #24: MdtypesUnitTest ................................ Passed 0.19 sec Start 25: OnlineHelpUnitTests 25/73 Test #25: OnlineHelpUnitTests ............................ Passed 0.17 sec Start 26: OptionsUnitTests 26/73 Test #26: OptionsUnitTests ............................... Passed 0.26 sec Start 27: PbcutilUnitTest 27/73 Test #27: PbcutilUnitTest ................................ Passed 0.16 sec Start 28: RandomUnitTests 28/73 Test #28: RandomUnitTests ................................ Passed 0.17 sec Start 29: RestraintTests 29/73 Test #29: RestraintTests ................................. Passed 0.15 sec Start 30: TableUnitTests 30/73 Test #30: TableUnitTests ................................. Passed 0.30 sec Start 31: TaskAssignmentUnitTests 31/73 Test #31: TaskAssignmentUnitTests ........................ Passed 0.14 sec Start 32: GmxTimingTests 32/73 Test #32: GmxTimingTests ................................. Passed 0.14 sec Start 33: TopologyTest 33/73 Test #33: TopologyTest ................................... Passed 0.16 sec Start 34: PullTest 34/73 Test #34: PullTest ....................................... Passed 0.15 sec Start 35: SimdUnitTests 35/73 Test #35: SimdUnitTests .................................. Passed 0.18 sec Start 36: CompatibilityHelpersTests 36/73 Test #36: CompatibilityHelpersTests ...................... Passed 0.14 sec Start 37: GmxAnaTest 37/73 Test #37: GmxAnaTest ..................................... Passed 0.84 sec Start 38: GmxPreprocessTests 38/73 Test #38: GmxPreprocessTests ............................. Passed 1.05 sec Start 39: Pdb2gmx1Test 39/73 Test #39: Pdb2gmx1Test ................................... Passed 1.32 sec Start 40: Pdb2gmx2Test 40/73 Test #40: Pdb2gmx2Test ................................... Passed 1.29 sec Start 41: Pdb2gmx3Test 41/73 Test #41: Pdb2gmx3Test ................................... Passed 3.14 sec Start 42: CorrelationsTest 42/73 Test #42: CorrelationsTest ............................... Passed 0.19 sec Start 43: AnalysisDataUnitTests 43/73 Test #43: AnalysisDataUnitTests .......................... Passed 0.08 sec Start 44: CoordinateIOTests 44/73 Test #44: CoordinateIOTests .............................. Passed 0.23 sec Start 45: TrajectoryAnalysisUnitTests 45/73 Test #45: TrajectoryAnalysisUnitTests .................... Passed 0.67 sec Start 46: EnergyAnalysisUnitTests 46/73 Test #46: EnergyAnalysisUnitTests ........................ Passed 0.26 sec Start 47: ToolUnitTests 47/73 Test #47: ToolUnitTests .................................. Passed 1.72 sec Start 48: FileIOTests 48/73 Test #48: FileIOTests .................................... Passed 0.16 sec Start 49: SelectionUnitTests 49/73 Test #49: SelectionUnitTests ............................. Passed 0.36 sec Start 50: MdrunOutputTests 50/73 Test #50: MdrunOutputTests ............................... Passed 0.79 sec Start 51: MdrunModulesTests 51/73 Test #51: MdrunModulesTests .............................. Passed 0.74 sec Start 52: MdrunIOTests 52/73 Test #52: MdrunIOTests ................................... Passed 1.31 sec Start 53: MdrunTestsOneRank 53/73 Test #53: MdrunTestsOneRank .............................. Passed 1.29 sec Start 54: MdrunTestsTwoRanks 54/73 Test #54: MdrunTestsTwoRanks ............................. Passed 0.84 sec Start 55: MdrunSingleRankAlgorithmsTests 55/73 Test #55: MdrunSingleRankAlgorithmsTests ................. Passed 0.24 sec Start 56: MdrunNonIntegratorTests 56/73 Test #56: MdrunNonIntegratorTests ........................ Passed 3.52 sec Start 57: MdrunTpiTests 57/73 Test #57: MdrunTpiTests .................................. Passed 0.62 sec Start 58: MdrunMpiTests 58/73 Test #58: MdrunMpiTests .................................. Passed 0.91 sec Start 59: MdrunMultiSimTests 59/73 Test #59: MdrunMultiSimTests ............................. Passed 0.19 sec Start 60: MdrunMultiSimReplexTests 60/73 Test #60: MdrunMultiSimReplexTests ....................... Passed 0.19 sec Start 61: MdrunMultiSimReplexEquivalenceTests 61/73 Test #61: MdrunMultiSimReplexEquivalenceTests ............ Passed 2.74 sec Start 62: MdrunMpi1RankPmeTests 62/73 Test #62: MdrunMpi1RankPmeTests .......................... Passed 0.21 sec Start 63: MdrunMpi2RankPmeTests 63/73 Test #63: MdrunMpi2RankPmeTests .......................... Passed 0.26 sec Start 64: MdrunMpiCoordinationBasicTestsOneRank 64/73 Test #64: MdrunMpiCoordinationBasicTestsOneRank .......... Passed 0.10 sec Start 65: MdrunMpiCoordinationBasicTestsTwoRanks 65/73 Test #65: MdrunMpiCoordinationBasicTestsTwoRanks ......... Passed 0.14 sec Start 66: MdrunMpiCoordinationCouplingTestsOneRank 66/73 Test #66: MdrunMpiCoordinationCouplingTestsOneRank ....... Passed 0.50 sec Start 67: MdrunMpiCoordinationCouplingTestsTwoRanks 67/73 Test #67: MdrunMpiCoordinationCouplingTestsTwoRanks ...... Passed 0.61 sec Start 68: MdrunMpiCoordinationConstraintsTestsOneRank 68/73 Test #68: MdrunMpiCoordinationConstraintsTestsOneRank .... Passed 14.46 sec Start 69: MdrunMpiCoordinationConstraintsTestsTwoRanks 69/73 Test #69: MdrunMpiCoordinationConstraintsTestsTwoRanks ... Passed 14.35 sec Start 70: MdrunFEPTests 70/73 Test #70: MdrunFEPTests .................................. Passed 0.57 sec Start 71: MdrunPullTests 71/73 Test #71: MdrunPullTests ................................. Passed 1.13 sec Start 72: MdrunSimulatorComparison 72/73 Test #72: MdrunSimulatorComparison ....................... Passed 7.63 sec Start 73: MdrunVirtualSiteTests 73/73 Test #73: MdrunVirtualSiteTests .......................... Passed 0.23 sec 100% tests passed, 0 tests failed out of 73 Label Time Summary: GTest = 71.87 sec*proc (73 tests) IntegrationTest = 24.24 sec*proc (19 tests) MpiTest = 37.75 sec*proc (19 tests) QuickGpuTest = 6.34 sec*proc (15 tests) SlowTest = 39.54 sec*proc (13 tests) UnitTest = 8.09 sec*proc (41 tests) Total Test time (real) = 72.01 sec gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Built target run-ctest-nophys /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/tests /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Some tests not available cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Built target missing-tests-notice /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles/check.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/check.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' [100%] Built target check gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build/CMakeFiles 0 gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/mpich_d/redhat-linux-build' + [[ mpich = openmpi ]] + popd ~/build/BUILD/gromacs-2022.3 + test -n mpich + module unload mpi/mpich-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + for mpi in '' mpich openmpi + test -n openmpi + module load mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + pushd openmpi_d ~/build/BUILD/gromacs-2022.3/openmpi_d ~/build/BUILD/gromacs-2022.3 + [[ openmpi = openmpi ]] + export OMPI_MCA_rmaps_base_oversubscribe=1 + OMPI_MCA_rmaps_base_oversubscribe=1 + /usr/bin/cmake --build redhat-linux-build -j4 --verbose --target check Change Dir: '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 check /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/gmake -f CMakeFiles/Makefile2 check gmake[1]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/cmake -S/builddir/build/BUILD/gromacs-2022.3 -B/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles 96 /usr/bin/gmake -f CMakeFiles/Makefile2 CMakeFiles/check.dir/all gmake[2]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/depend /usr/bin/gmake -f src/external/googletest/googletest/CMakeFiles/gtest.dir/build.make src/external/googletest/googletest/CMakeFiles/gtest.dir/depend /usr/bin/gmake -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/external/googletest/googletest /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/external/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/CMakeFiles/scanner.dir/DependInfo.cmake "--color=" gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake "--color=" Dependencies file "src/programs/CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/CMakeFiles/mdrun_objlib.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' Dependencies file 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Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target scanner gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/CMakeFiles/scanner.dir/build.make src/gromacs/selection/CMakeFiles/scanner.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/selection/CMakeFiles/scanner.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 0%] Building CXX object src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -I/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wall -Wshadow -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=1 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT src/external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/src/gtest-all.cc Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". [ 0%] Built target scanner /usr/bin/gmake -f CMakeFiles/release-version-info.dir/build.make CMakeFiles/release-version-info.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles/release-version-info.dir/DependInfo.cmake "--color=" Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target mdrun_objlib Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energydata.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/CMakeFiles/mdrun_objlib.dir/build.make src/programs/CMakeFiles/mdrun_objlib.dir/build Dependencies file "src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/expandedensembleelement.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compiler_depend.internal". 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[ 0%] Generating release version information cd /builddir/build/BUILD/gromacs-2022.3 && /usr/bin/cmake -D PYTHON_EXECUTABLE=/usr/bin/python3.12 -D PROJECT_VERSION=2022.3-Fedora39 -D PROJECT_SOURCE_DIR=/builddir/build/BUILD/gromacs-2022.3 -D VERSION_CMAKEIN=/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/VersionInfo-partial.cmake.cmakein -D VERSION_OUT=/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/VersionInfo.cmake -D VERSION_STRING_OF_FORK=Fedora39 -P /builddir/build/BUILD/gromacs-2022.3/cmake/gmxGenerateVersionInfoWithoutGit.cmake Dependencies file "src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/atomic.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/thread_mpi.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/pointstate.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/awh/read_params.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/applied_forces/densityfitting/densityfitting.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/strdb.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringstream.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/stringutil.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". Dependencies file "src/gromacs/CMakeFiles/libgromacs.dir/utility/sycl_version_information.cpp.o.d" is newer than depends file "/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/CMakeFiles/libgromacs.dir/compiler_depend.internal". 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Consolidate compiler generated dependencies of target libgromacs gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/CMakeFiles/libgromacs.dir/build.make src/gromacs/CMakeFiles/libgromacs.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[3]: Nothing to be done for 'src/gromacs/CMakeFiles/libgromacs.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 62%] Built target libgromacs [ 62%] Linking CXX static library ../../../../lib/libgtest.a cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -P CMakeFiles/gtest.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/external/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1 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/builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o -MF CMakeFiles/testutils.dir/refdata.cpp.o.d -o CMakeFiles/testutils.dir/refdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::(anonymous namespace)::MockLogTarget::gmock_writeEntry(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:62:5, inlined from 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.198941].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp: In member function 'gmx::test::LoggerTestHelper::expectNoEntries(gmx::MDLogger::LogLevel)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/loggertest.cpp:113:35: note: '' declared here 113 | EXPECT_CALL(target, writeEntry(testing::_)).Times(0); | ^ [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/tinyxml2 -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o -MF CMakeFiles/testutils.dir/refdata_xml.cpp.o.d -o CMakeFiles/testutils.dir/refdata_xml.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/refdata_xml.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:48: In member function 'testing::internal::MatcherBase, std::allocator >*>::MatcherBase(testing::internal::MatcherBase, std::allocator >*> const&)', inlined from 'testing::Matcher, std::allocator >*>::Matcher(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextInputStream::gmock_readLine(testing::Matcher, std::allocator >*> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:71:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211524].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:90:43: note: '' declared here 90 | EXPECT_CALL(inputStream_, readLine(_)).WillRepeatedly(Invoke(this, &Impl::readInputLine)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockTextOutputStream::gmock_write(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:78:5, inlined from 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)' at /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.211531].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp: In member function 'gmx::test::InteractiveTestHelper::Impl::Impl(gmx::test::TestReferenceChecker)': /builddir/build/BUILD/gromacs-2022.3/src/testutils/interactivetest.cpp:92:41: note: '' declared here 92 | EXPECT_CALL(outputStream_, write(_)).WillRepeatedly(Invoke(this, &Impl::addOutput)); | ^ [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/simulationdatabase.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/testutils -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/stdiohelper.cpp.o -MF CMakeFiles/testutils.dir/stdiohelper.cpp.o.d -o CMakeFiles/testutils.dir/stdiohelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/stdiohelper.cpp [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/stringtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/CMakeFiles/testutils.dir/stringtest.cpp.o -MF CMakeFiles/testutils.dir/stringtest.cpp.o.d -o CMakeFiles/testutils.dir/stringtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/stringtest.cpp [ 62%] Building CXX object src/testutils/CMakeFiles/testutils.dir/testasserts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils && 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/energycomparison.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/energycomparison.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/refdata_tests.cpp.o cd 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CMakeFiles/testutils-test.dir/refdata_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/refdata_tests.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-mpi-test.dir/__/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem 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/usr/lib64/openmpi/lib/libmpi.so [ 64%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/moduletest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/simulatorcomparison.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simulatorcomparison.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" 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object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun_test_infrastructure.dir/terminationhelper.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/terminationhelper.cpp [ 64%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o -MF CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o.d -o CMakeFiles/mdrun_test_infrastructure.dir/trajectorycomparison.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/trajectorycomparison.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -MF CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o.d -o CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/tests/xvgtest_tests.cpp [ 64%] Building CXX object src/testutils/tests/CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/testutils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/testutils/tests/CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -MF CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o.d -o CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 64%] Linking CXX executable ../../../bin/testutils-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/testutils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testutils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/testutils-test.dir/interactivetest.cpp.o" "CMakeFiles/testutils-test.dir/refdata_tests.cpp.o" "CMakeFiles/testutils-test.dir/testasserts_tests.cpp.o" "CMakeFiles/testutils-test.dir/xvgtest_tests.cpp.o" "CMakeFiles/testutils-test.dir/__/unittest_main.cpp.o" -o ../../../bin/testutils-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../lib/libtestutils.a ../../../lib/libgromacs_openmpi_d.a ../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../lib/libtestutils.a ../../../lib/libtestutils.a ../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../lib/libgmock.a ../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 64%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun_test_infrastructure.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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-I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask32.cpp.o -MF CMakeFiles/utility-test.dir/bitmask32.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask32.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask32.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 65%] Built target testutils-mpi-test /usr/bin/gmake -f src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/build.make src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o -MF CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o.d -o CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator_mpi.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask64.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask64.cpp.o -MF CMakeFiles/utility-test.dir/bitmask64.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask64.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask64.cpp [ 65%] Linking CXX executable ../../../../bin/utility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-mpi-test.dir/physicalnodecommunicator_mpi.cpp.o" "CMakeFiles/utility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-mpi-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/bitmask128.cpp.o -MF CMakeFiles/utility-test.dir/bitmask128.cpp.o.d -o CMakeFiles/utility-test.dir/bitmask128.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/bitmask128.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 65%] Built target testutils-test /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build.make src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 65%] Building CXX object src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxlib/nonbonded/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxlib/nonbonded/tests/CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o -MF CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o.d -o CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxlib/nonbonded/tests/nb_free_energy.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/cstringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o -MF CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o.d -o CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/defaultinitializationallocator.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o -MF CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o.d -o CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/enumerationhelpers.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -MF CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o.d -o CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/inmemoryserializer.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 65%] Built target utility-mpi-test /usr/bin/gmake -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build.make src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -MF CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o.d -o CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/calc_verletbuf.cpp [ 65%] Linking CXX executable ../../../../../bin/nonbonded-fep-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxlib/nonbonded/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nonbonded-fep-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nonbonded-fep-test.dir/nb_free_energy.cpp.o" "CMakeFiles/nonbonded-fep-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/nonbonded-fep-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi_d.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreeserializer.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calcvir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calcvir.cpp.o -MF CMakeFiles/mdlib-test.dir/calcvir.cpp.o.d -o CMakeFiles/mdlib-test.dir/calcvir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/calcvir.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -MF CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o.d -o CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/keyvaluetreetransform.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o -MF CMakeFiles/mdlib-test.dir/constr.cpp.o.d -o CMakeFiles/mdlib-test.dir/constr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constr.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/listoflists.cpp.o -MF CMakeFiles/utility-test.dir/listoflists.cpp.o.d -o CMakeFiles/utility-test.dir/listoflists.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/listoflists.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/logger.cpp.o -MF CMakeFiles/utility-test.dir/logger.cpp.o.d -o CMakeFiles/utility-test.dir/logger.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/logger.cpp [ 65%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/message_string_collector.cpp.o -MF CMakeFiles/utility-test.dir/message_string_collector.cpp.o.d -o CMakeFiles/utility-test.dir/message_string_collector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/message_string_collector.cpp [ 65%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestdata.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/path.cpp.o -MF CMakeFiles/utility-test.dir/path.cpp.o.d -o CMakeFiles/utility-test.dir/path.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/path.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/utility/tests/CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -MF CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o.d -o CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/physicalnodecommunicator.cpp [ 66%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/range.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o -MF CMakeFiles/mdlib-test.dir/ebin.cpp.o.d -o CMakeFiles/mdlib-test.dir/ebin.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/ebin.cpp [ 66%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -MF CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o.d -o CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energydrifttracker.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/strconvert.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -MF CMakeFiles/mdlib-test.dir/energyoutput.cpp.o.d -o CMakeFiles/mdlib-test.dir/energyoutput.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/energyoutput.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -MF CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o.d -o CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringtoenumvalueconverter.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:48, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/strconvert.cpp:45: In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ In member function 'std::_Optional_payload_base >::_Storage, true>::_Storage&>(std::in_place_t, std::array&)', inlined from 'std::_Optional_payload_base >::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:126:4, inlined from 'std::_Optional_payload, true, true, true>::_Optional_payload_base&>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:339:42, inlined from 'std::_Optional_base, true, true>::_Optional_base&, false>(std::in_place_t, std::array&)' at /usr/include/c++/13/optional:650:4, inlined from 'std::optional >::optional&, true>(std::array&)' at /usr/include/c++/13/optional:749:47, inlined from 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:275:28: /usr/include/c++/13/optional:214:15: warning: 'valuesAsArray' may be used uninitialized [-Wmaybe-uninitialized] 214 | : _M_value(std::forward<_Args>(__args)...) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h: In function 'gmx::parsedArrayFromInputString(std::__cxx11::basic_string, std::allocator > const&)std::optional >': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/strconvert.h:269:46: note: 'valuesAsArray' declared here 269 | std::array valuesAsArray; | ^~~~~~~~~~~~~ [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/stringutil.cpp.o -MF CMakeFiles/utility-test.dir/stringutil.cpp.o.d -o CMakeFiles/utility-test.dir/stringutil.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/stringutil.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/template_mp.cpp.o -MF CMakeFiles/utility-test.dir/template_mp.cpp.o.d -o CMakeFiles/utility-test.dir/template_mp.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/template_mp.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textreader.cpp.o -MF CMakeFiles/utility-test.dir/textreader.cpp.o.d -o CMakeFiles/utility-test.dir/textreader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textreader.cpp [ 66%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o -MF CMakeFiles/mdlib-test.dir/expanded.cpp.o.d -o CMakeFiles/mdlib-test.dir/expanded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/expanded.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/textwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/utility-test.dir/textwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/textwriter.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/typetraits.cpp.o -MF CMakeFiles/utility-test.dir/typetraits.cpp.o.d -o CMakeFiles/utility-test.dir/typetraits.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/tests/typetraits.cpp [ 66%] Building CXX object src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/utility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/utility/tests/CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 66%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/freeenergyparameters.cpp [ 66%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrog.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrog.cpp [ 66%] Linking CXX executable ../../../../bin/utility-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/utility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/utility-test.dir/alignedallocator.cpp.o" "CMakeFiles/utility-test.dir/arrayref.cpp.o" "CMakeFiles/utility-test.dir/bitmask32.cpp.o" "CMakeFiles/utility-test.dir/bitmask64.cpp.o" "CMakeFiles/utility-test.dir/bitmask128.cpp.o" "CMakeFiles/utility-test.dir/cstringutil.cpp.o" "CMakeFiles/utility-test.dir/defaultinitializationallocator.cpp.o" "CMakeFiles/utility-test.dir/enumerationhelpers.cpp.o" "CMakeFiles/utility-test.dir/fixedcapacityvector.cpp.o" "CMakeFiles/utility-test.dir/inmemoryserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreeserializer.cpp.o" "CMakeFiles/utility-test.dir/keyvaluetreetransform.cpp.o" "CMakeFiles/utility-test.dir/listoflists.cpp.o" "CMakeFiles/utility-test.dir/logger.cpp.o" "CMakeFiles/utility-test.dir/mdmodulesnotifier.cpp.o" "CMakeFiles/utility-test.dir/message_string_collector.cpp.o" "CMakeFiles/utility-test.dir/path.cpp.o" "CMakeFiles/utility-test.dir/physicalnodecommunicator.cpp.o" "CMakeFiles/utility-test.dir/range.cpp.o" "CMakeFiles/utility-test.dir/strconvert.cpp.o" "CMakeFiles/utility-test.dir/stringtoenumvalueconverter.cpp.o" "CMakeFiles/utility-test.dir/stringutil.cpp.o" "CMakeFiles/utility-test.dir/template_mp.cpp.o" "CMakeFiles/utility-test.dir/textreader.cpp.o" "CMakeFiles/utility-test.dir/textwriter.cpp.o" "CMakeFiles/utility-test.dir/typetraits.cpp.o" "CMakeFiles/utility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/utility-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 66%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestdata.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o -MF CMakeFiles/mdlib-test.dir/settle.cpp.o.d -o CMakeFiles/mdlib-test.dir/settle.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settle.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestdata.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestdata.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o -MF CMakeFiles/mdlib-test.dir/shake.cpp.o.d -o CMakeFiles/mdlib-test.dir/shake.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/shake.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -MF CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o.d -o CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/simulationsignal.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroups.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroups.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroups.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -MF CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o.d -o CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/updategroupscog.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/constrtestrunners_gpu.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/leapfrogtestrunners_gpu.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -MF CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o.d -o CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/settletestrunners_gpu.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -MF CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o.d -o CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdlib/tests/wholemoleculetransform.cpp [ 67%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdlib/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../bin/mdlib-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdlib-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o" "CMakeFiles/mdlib-test.dir/calcvir.cpp.o" "CMakeFiles/mdlib-test.dir/constr.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/ebin.cpp.o" "CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o" "CMakeFiles/mdlib-test.dir/energyoutput.cpp.o" "CMakeFiles/mdlib-test.dir/expanded.cpp.o" "CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrog.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/settle.cpp.o" "CMakeFiles/mdlib-test.dir/settletestdata.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o" "CMakeFiles/mdlib-test.dir/shake.cpp.o" "CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o" "CMakeFiles/mdlib-test.dir/updategroups.cpp.o" "CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o" "CMakeFiles/mdlib-test.dir/constrtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/settletestrunners_gpu.cpp.o" "CMakeFiles/mdlib-test.dir/wholemoleculetransform.cpp.o" "CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdlib-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Built target nonbonded-fep-test /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build.make src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/awh_setup.cpp.o -MF CMakeFiles/awh-test.dir/awh_setup.cpp.o.d -o CMakeFiles/awh-test.dir/awh_setup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/awh_setup.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias.cpp.o -MF CMakeFiles/awh-test.dir/bias.cpp.o.d -o CMakeFiles/awh-test.dir/bias.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Built target utility-test /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build.make src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfitting.cpp [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingamplitudelookup.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasgrid.cpp.o -MF CMakeFiles/awh-test.dir/biasgrid.cpp.o.d -o CMakeFiles/awh-test.dir/biasgrid.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/biasgrid.cpp [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingforceprovider.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biassharing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/densityfitting/tests/densityfittingoptions.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/biasstate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -MF CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o.d -o CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/awh/tests/bias_fep_lambda_state.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Built target mdlib-test /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build.make src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmminputgenerator.cpp [ 67%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/densityfitting/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Building CXX object src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/awh/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/awh/tests/CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../../bin/density_fitting_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/densityfitting/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/density_fitting_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o" "CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/density_fitting_applied_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi_d.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmtopologypreprocessor.cpp [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmoptions.cpp [ 67%] Linking CXX executable ../../../../../bin/awh-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/awh/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/awh-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/awh-test.dir/awh_setup.cpp.o" "CMakeFiles/awh-test.dir/bias.cpp.o" "CMakeFiles/awh-test.dir/biasgrid.cpp.o" "CMakeFiles/awh-test.dir/biassharing.cpp.o" "CMakeFiles/awh-test.dir/biasstate.cpp.o" "CMakeFiles/awh-test.dir/bias_fep_lambda_state.cpp.o" "CMakeFiles/awh-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/awh-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi_d.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -DGMX_CP2K=0 -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmmforceprovider.cpp [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/qmmm/tests/qmmm.cpp [ 67%] Building CXX object src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/qmmm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/qmmm/tests/CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 67%] Linking CXX executable ../../../../../bin/qmmm_applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/qmmm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/qmmm_applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/qmmm_applied_forces-test.dir/qmmminputgenerator.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmtopologypreprocessor.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmoptions.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmmforceprovider.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/qmmm.cpp.o" "CMakeFiles/qmmm_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../../bin/qmmm_applied_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../../lib/libtestutils.a ../../../../../lib/libgromacs_openmpi_d.a ../../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Built target density_fitting_applied_forces-test /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build.make src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 67%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -MF CMakeFiles/applied_forces-test.dir/electricfield.cpp.o.d -o CMakeFiles/applied_forces-test.dir/electricfield.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/applied_forces/tests/electricfield.cpp [ 67%] Building CXX object src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/applied_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/applied_forces/tests/CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../bin/applied_forces-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/applied_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/applied_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/applied_forces-test.dir/electricfield.cpp.o" "CMakeFiles/applied_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/applied_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Built target awh-test /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build.make src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o -MF CMakeFiles/listed_forces-test.dir/bonded.cpp.o.d -o CMakeFiles/listed_forces-test.dir/bonded.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/bonded.cpp [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/pairs.cpp.o -MF CMakeFiles/listed_forces-test.dir/pairs.cpp.o.d -o CMakeFiles/listed_forces-test.dir/pairs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/pairs.cpp [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -MF CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o.d -o CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/listed_forces/tests/position_restraints.cpp [ 68%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/listed_forces/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../bin/listed_forces-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/listed_forces/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/listed_forces-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/listed_forces-test.dir/bonded.cpp.o" "CMakeFiles/listed_forces-test.dir/pairs.cpp.o" "CMakeFiles/listed_forces-test.dir/position_restraints.cpp.o" "CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/listed_forces-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Built target applied_forces-test /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/nbnxm/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build.make src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -MF CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o.d -o CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/nbnxm/tests/kernelsetup.cpp [ 68%] Building CXX object src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/nbnxm/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/nbnxm/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/nbnxm/tests/CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 68%] Linking CXX executable ../../../../bin/nbnxm-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/nbnxm/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/nbnxm-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/nbnxm-test.dir/kernelsetup.cpp.o" "CMakeFiles/nbnxm-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/nbnxm-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Built target qmmm_applied_forces-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.207740].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp: In member function 'gmx::test::MockHelpTopic::MockHelpTopic(char const*, char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.cpp:77:33: note: '' declared here 77 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockHelpTopic::writeHelpBase)); | ^ [ 68%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Built target nbnxm-test /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o -MF CMakeFiles/domdec-test.dir/hashedmap.cpp.o.d -o CMakeFiles/domdec-test.dir/hashedmap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/hashedmap.cpp [ 68%] Linking CXX static library ../../../../lib/libonlinehelp-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -P CMakeFiles/onlinehelp-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libonlinehelp-test-shared.a "CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o" "CMakeFiles/onlinehelp-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libonlinehelp-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Built target onlinehelp-test-shared /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build.make src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 68%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/haloexchange_mpi.cpp [ 69%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -MF CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o.d -o CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/domdec/tests/localatomsetmanager.cpp [ 69%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 69%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/domdec/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 69%] Linking CXX executable ../../../../bin/domdec-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o" "CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-mpi-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 69%] Linking CXX executable ../../../../bin/domdec-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/domdec/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/domdec-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/domdec-test.dir/hashedmap.cpp.o" "CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o" "CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/domdec-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build.make src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fft/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fft/tests/CMakeFiles/fft-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build.make src/gromacs/fft/tests/CMakeFiles/fft-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 70%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" 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-MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -MF CMakeFiles/ewald-test.dir/pmegathertest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmegathertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmegathertest.cpp [ 70%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fft/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fft/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 70%] Linking CXX executable ../../../../bin/fft-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fft/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fft-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fft-test.dir/fft.cpp.o" "CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fft-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesolvetest.cpp [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -MF CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o.d -o CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmesplinespreadtest.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 70%] Built target domdec-test /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build.make src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_availability.cpp [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_stream_manager.cpp [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -MF CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o.d -o CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/ewald/tests/pmetestcommon.cpp [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -MF CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/hostallocator.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 70%] Built target domdec-mpi-test /usr/bin/gmake -f src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/build.make src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -MF CMakeFiles/hardware-test.dir/cpuinfo.cpp.o.d -o CMakeFiles/hardware-test.dir/cpuinfo.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/cpuinfo.cpp [ 70%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/hardwaretopology.cpp [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pme.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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70%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -MF CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o.d -o CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/mockhardwaretopology.cpp [ 70%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/ewald/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests/Testing/Temporary\" -DTEST_USES_DYNAMIC_REGISTRATION=true -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 70%] Linking CXX executable ../../../../bin/ewald-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/ewald/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ewald-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o" "CMakeFiles/ewald-test.dir/pmegathertest.cpp.o" "CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o" "CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o" "CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o" "CMakeFiles/ewald-test.dir/pme.cpp.o" "CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/ewald-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 70%] Built target fft-test /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/CMakeFiles/math-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/math/tests/CMakeFiles/math-test.dir/build.make src/gromacs/math/tests/CMakeFiles/math-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 70%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -MF CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o.d -o CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/arrayrefwithpadding.cpp [ 70%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -MF CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/pinnedmemorychecker.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -MF CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/devicetransfers.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/device_buffer.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -MF CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/gpueventsynchronizer.cpp [ 71%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -MF CMakeFiles/math-test.dir/coordinatetransformation.cpp.o.d -o CMakeFiles/math-test.dir/coordinatetransformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/coordinatetransformation.cpp [ 71%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o -MF CMakeFiles/hardware-test.dir/device_management.cpp.o.d -o CMakeFiles/hardware-test.dir/device_management.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/hardware/tests/device_management.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -MF CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gpu_utils/tests/typecasts.cpp [ 71%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gpu_utils/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests/Testing/Temporary\" -DTEST_USES_HARDWARE_DETECTION=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 71%] Linking CXX executable ../../../../bin/gpu_utils-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gpu_utils/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gpu_utils-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o" "CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o" "CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o" "CMakeFiles/gpu_utils-test.dir/devicetransfers.cpp.o" "CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o" "CMakeFiles/gpu_utils-test.dir/gpueventsynchronizer.cpp.o" "CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o" "CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gpu_utils-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 72%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/hardware/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 72%] Linking CXX executable ../../../../bin/hardware-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/hardware/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/hardware-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/hardware-test.dir/cpuinfo.cpp.o" "CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/mockhardwaretopology.cpp.o" "CMakeFiles/hardware-test.dir/device_management.cpp.o" "CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/hardware-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o -MF CMakeFiles/math-test.dir/densityfit.cpp.o.d -o CMakeFiles/math-test.dir/densityfit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/densityfit.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/dofit.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/dofit.cpp.o -MF CMakeFiles/math-test.dir/dofit.cpp.o.d -o CMakeFiles/math-test.dir/dofit.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/dofit.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -MF CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o.d -o CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/exponentialmovingaverage.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o -MF CMakeFiles/math-test.dir/functions.cpp.o.d -o CMakeFiles/math-test.dir/functions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/functions.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o -MF CMakeFiles/math-test.dir/gausstransform.cpp.o.d -o CMakeFiles/math-test.dir/gausstransform.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/gausstransform.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/invertmatrix.cpp.o -MF CMakeFiles/math-test.dir/invertmatrix.cpp.o.d -o CMakeFiles/math-test.dir/invertmatrix.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/invertmatrix.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 73%] Built target gpu_utils-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/build.make 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src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -MF CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o.d -o CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp [ 73%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include 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-o CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/accessor_policy.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 73%] Built target hardware-test /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build.make src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 73%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o -MF CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o.d -o CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/observablesreducer.cpp [ 73%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o -MF CMakeFiles/mdspan-test.dir/extents.cpp.o.d -o CMakeFiles/mdspan-test.dir/extents.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/extents.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:36: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockThreadAffinityAccess::gmock_setCurrentThreadAffinityToCore(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.h:70:5, inlined from 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.226752].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp: In member function 'gmx::test::MockThreadAffinityAccess::MockThreadAffinityAccess()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinitytest.cpp:59:50: note: '' declared here 59 | ON_CALL(*this, setCurrentThreadAffinityToCore(_)).WillByDefault(Return(true)); | ^ [ 73%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extensions.cpp.o -MF CMakeFiles/mdspan-test.dir/extensions.cpp.o.d -o CMakeFiles/mdspan-test.dir/extensions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/extensions.cpp [ 73%] Linking CXX static library ../../../../lib/libmdrunutility-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -P CMakeFiles/mdrunutility-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libmdrunutility-test-shared.a "CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o" "CMakeFiles/mdrunutility-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libmdrunutility-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 73%] Built target mdrunutility-test-shared [ 75%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o -MF CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o.d -o CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/checkpointdata.cpp [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o -MF CMakeFiles/mdspan-test.dir/layouts.cpp.o.d -o CMakeFiles/mdspan-test.dir/layouts.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/layouts.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o -MF CMakeFiles/math-test.dir/neldermead.cpp.o.d -o CMakeFiles/math-test.dir/neldermead.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/neldermead.cpp [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o -MF CMakeFiles/mdspan-test.dir/mdspan.cpp.o.d -o CMakeFiles/mdspan-test.dir/mdspan.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/tests/mdspan.cpp [ 75%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -MF CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o.d -o CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/forcebuffers.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o -MF CMakeFiles/math-test.dir/optimization.cpp.o.d -o CMakeFiles/math-test.dir/optimization.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/optimization.cpp [ 75%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -MF CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o.d -o CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdtypes/tests/multipletimestepping.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o -MF CMakeFiles/math-test.dir/paddedvector.cpp.o.d -o CMakeFiles/math-test.dir/paddedvector.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/paddedvector.cpp [ 75%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdspan/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdspan/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/mdspan-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdspan/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdspan-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o" "CMakeFiles/mdspan-test.dir/extents.cpp.o" "CMakeFiles/mdspan-test.dir/extensions.cpp.o" "CMakeFiles/mdspan-test.dir/layouts.cpp.o" "CMakeFiles/mdspan-test.dir/mdspan.cpp.o" "CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdspan-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 75%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdtypes/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Linking CXX executable ../../../../bin/mdtypes-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdtypes/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdtypes-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdtypes-test.dir/observablesreducer.cpp.o" "CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o" "CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o" "CMakeFiles/mdtypes-test.dir/multipletimestepping.cpp.o" "CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdtypes-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 75%] Built target mdspan-test /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build.make src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpformat.cpp [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:47: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.220014].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesSubTopics_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:106:36: note: '' declared here 106 | EXPECT_CALL(firstSub, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.219159].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp: In member function '(anonymous namespace)::HelpManagerTest_HandlesRootTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpmanager.cpp:95:38: note: '' declared here 95 | EXPECT_CALL(rootTopic_, writeHelp(_)); | ^ [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -MF CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/helpwritercontext.cpp [ 75%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/onlinehelp/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 75%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o -MF CMakeFiles/math-test.dir/vectypes.cpp.o.d -o CMakeFiles/math-test.dir/vectypes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/math/tests/vectypes.cpp [ 76%] Linking CXX executable ../../../../bin/onlinehelp-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/onlinehelp/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/onlinehelp-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o" "CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o" "CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/onlinehelp-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a [ 76%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/math/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 77%] Linking CXX executable ../../../../bin/math-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/math/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/math-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o" "CMakeFiles/math-test.dir/coordinatetransformation.cpp.o" "CMakeFiles/math-test.dir/densityfit.cpp.o" "CMakeFiles/math-test.dir/dofit.cpp.o" "CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o" "CMakeFiles/math-test.dir/functions.cpp.o" "CMakeFiles/math-test.dir/gausstransform.cpp.o" "CMakeFiles/math-test.dir/densityfittingforce.cpp.o" "CMakeFiles/math-test.dir/invertmatrix.cpp.o" "CMakeFiles/math-test.dir/matrix.cpp.o" "CMakeFiles/math-test.dir/multidimarray.cpp.o" "CMakeFiles/math-test.dir/neldermead.cpp.o" "CMakeFiles/math-test.dir/optimization.cpp.o" "CMakeFiles/math-test.dir/paddedvector.cpp.o" "CMakeFiles/math-test.dir/vectypes.cpp.o" "CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/math-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 77%] Built target mdtypes-test /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests/CMakeFiles/options-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/options/tests/CMakeFiles/options-test.dir/build.make src/gromacs/options/tests/CMakeFiles/options-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 77%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -MF CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o.d -o CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:49: In member function 'testing::internal::MatcherBase, std::allocator > const&>::MatcherBase(testing::internal::MatcherBase, std::allocator > const&> const&)', inlined from 'testing::Matcher, std::allocator > const&>::Matcher(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:514:18, inlined from '(anonymous namespace)::MockOptionStorage::gmock_convertValue(testing::Matcher, std::allocator > const&> const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:113:5, inlined from '__ct ' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:5, inlined from '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:138:43: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.394537].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp: In member function '(anonymous namespace)::MockOption::createStorage(gmx::OptionManagerContainer const&) const': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/abstractoptionstorage.cpp:147:32: note: '' declared here 147 | ON_CALL(*this, convertValue(_)).WillByDefault(WithArg<0>(Invoke(this, &MockOptionStorage::addValue))); | ^ [ 77%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o -MF CMakeFiles/options-test.dir/filenameoption.cpp.o.d -o CMakeFiles/options-test.dir/filenameoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/filenameoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 77%] Built target onlinehelp-test /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build.make src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 78%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o -MF CMakeFiles/pbcutil-test.dir/com.cpp.o.d -o CMakeFiles/pbcutil-test.dir/com.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/com.cpp [ 78%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" 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78%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o -MF CMakeFiles/pbcutil-test.dir/mshift.cpp.o.d -o CMakeFiles/pbcutil-test.dir/mshift.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/mshift.cpp [ 78%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -MF CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o.d -o CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/pbcutil/tests/pbcenums.cpp [ 78%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pbcutil/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 78%] Linking CXX executable ../../../../bin/pbcutil-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pbcutil/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbcutil-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pbcutil-test.dir/com.cpp.o" "CMakeFiles/pbcutil-test.dir/mshift.cpp.o" "CMakeFiles/pbcutil-test.dir/pbc.cpp.o" "CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o" "CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pbcutil-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 78%] Built target math-test /usr/bin/gmake -f src/gromacs/random/tests/CMakeFiles/random-test.dir/build.make src/gromacs/random/tests/CMakeFiles/random-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o -MF CMakeFiles/options-test.dir/repeatingsection.cpp.o.d -o CMakeFiles/options-test.dir/repeatingsection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/repeatingsection.cpp [ 78%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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object src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external 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src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o -MF CMakeFiles/options-test.dir/timeunitmanager.cpp.o.d -o CMakeFiles/options-test.dir/timeunitmanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/timeunitmanager.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o -MF CMakeFiles/random-test.dir/seed.cpp.o.d -o CMakeFiles/random-test.dir/seed.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/seed.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -MF CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o.d -o CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/tabulatednormaldistribution.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 79%] Built target pbcutil-test /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/restraint/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/build.make 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/options/tests/treesupport.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Linking CXX executable ../../../../bin/restraintpotential-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/restraint/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/restraintpotential-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/restraintpotential-test.dir/manager.cpp.o" "CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/restraintpotential-test 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -MF CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o.d -o CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/random/tests/uniformrealdistribution.cpp [ 79%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/random/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/options/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 79%] Linking CXX executable ../../../../bin/random-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/random/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/random-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/random-test.dir/exponentialdistribution.cpp.o" "CMakeFiles/random-test.dir/gammadistribution.cpp.o" "CMakeFiles/random-test.dir/normaldistribution.cpp.o" "CMakeFiles/random-test.dir/seed.cpp.o" "CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o" "CMakeFiles/random-test.dir/threefry.cpp.o" "CMakeFiles/random-test.dir/uniformintdistribution.cpp.o" "CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o" "CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/random-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 79%] Linking CXX executable ../../../../bin/options-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/options/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/options-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o" "CMakeFiles/options-test.dir/filenameoption.cpp.o" "CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o" "CMakeFiles/options-test.dir/option.cpp.o" "CMakeFiles/options-test.dir/optionsassigner.cpp.o" "CMakeFiles/options-test.dir/repeatingsection.cpp.o" "CMakeFiles/options-test.dir/timeunitmanager.cpp.o" "CMakeFiles/options-test.dir/treesupport.cpp.o" "CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/options-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 79%] Built target restraintpotential-test /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tables/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tables/tests/CMakeFiles/table-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/tables/tests/CMakeFiles/table-test.dir/build.make src/gromacs/tables/tests/CMakeFiles/table-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 79%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/splinetable.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tables/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/table-test.dir/splinetable.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tables/tests/splinetable.cpp [ 79%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tables/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tables/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tables/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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/usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 79%] Built target random-test /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/taskassignment/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build.make src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 79%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -MF CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o.d -o CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/taskassignment/tests/usergpuids.cpp [ 79%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/taskassignment/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/taskassignment/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 79%] Built target options-test /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/timing/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/timing/tests/CMakeFiles/timing-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build.make src/gromacs/timing/tests/CMakeFiles/timing-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 80%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/timing.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/timing/tests/CMakeFiles/timing-test.dir/timing.cpp.o -MF CMakeFiles/timing-test.dir/timing.cpp.o.d -o CMakeFiles/timing-test.dir/timing.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/timing/tests/timing.cpp [ 80%] Linking CXX executable ../../../../bin/taskassignment-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/taskassignment/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/taskassignment-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o" "CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/taskassignment-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 80%] Building CXX object src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/timing/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/timing/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/timing/tests/CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 80%] Linking CXX executable ../../../../bin/timing-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/timing/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/timing-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/timing-test.dir/timing.cpp.o" "CMakeFiles/timing-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/timing-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 80%] Built target table-test /usr/bin/gmake -f src/gromacs/topology/tests/CMakeFiles/topology-test.dir/build.make src/gromacs/topology/tests/CMakeFiles/topology-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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-DTEST_DATA_PATH=\"src/gromacs/topology/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/topology/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -MF CMakeFiles/topology-test.dir/exclusionblocks.cpp.o.d -o CMakeFiles/topology-test.dir/exclusionblocks.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/exclusionblocks.cpp [ 80%] 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o -MF CMakeFiles/topology-test.dir/symtab.cpp.o.d -o CMakeFiles/topology-test.dir/symtab.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/topology/tests/symtab.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 80%] Built target timing-test /usr/bin/gmake -f src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/build.make src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend gmake[3]: Entering directory 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src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/pull.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/pulling/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pulling/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects 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-I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o -MF CMakeFiles/simd-test.dir/base.cpp.o.d -o CMakeFiles/simd-test.dir/base.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/base.cpp [ 82%] Linking CXX executable ../../../../bin/pull-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/pulling/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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/usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 82%] Linking CXX executable ../../../../bin/topology-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/topology/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/topology-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld 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'/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 82%] Built target taskassignment-test /usr/bin/gmake -f src/gromacs/compat/tests/CMakeFiles/compat-test.dir/build.make src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/compat/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/compat/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/compat/tests/CMakeFiles/compat-test.dir/DependInfo.cmake "--color=" [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o cd 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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-MF CMakeFiles/simd-test.dir/scalar.cpp.o.d -o CMakeFiles/simd-test.dir/scalar.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar.cpp [ 82%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/compat/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/compat/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Linking CXX executable ../../../../bin/compat-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/compat/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/compat-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/compat-test.dir/mp11.cpp.o" "CMakeFiles/compat-test.dir/pointers.cpp.o" "CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/compat-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o -MF CMakeFiles/simd-test.dir/scalar_util.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_util.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o -MF CMakeFiles/simd-test.dir/scalar_math.cpp.o.d -o CMakeFiles/simd-test.dir/scalar_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/scalar_math.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o -MF CMakeFiles/simd-test.dir/simd.cpp.o.d -o CMakeFiles/simd-test.dir/simd.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint.cpp [ 82%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -MF CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o.d -o CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_floatingpoint_util.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 82%] Built target pull-test /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build.make src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/gmxana-test.dir/entropy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/entropy.cpp [ 82%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_chi.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxana/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -MF CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o.d -o CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxana/tests/gmx_traj.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 82%] Built target compat-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build 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/builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 82%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/genconf.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 82%] Built target topology-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 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-DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 82%] Linking CXX executable ../../../../bin/gmxana-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxana/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxana-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_memory.cpp [ 82%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=1 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/gpp_bond_atomtype.cpp [ 83%] Linking CXX executable ../../../../bin/pdb2gmx1-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx1-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx1-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/grompp_directives.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_vector_operations.cpp [ 83%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o -MF CMakeFiles/simd-test.dir/simd4.cpp.o.d -o CMakeFiles/simd-test.dir/simd4.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4.cpp [ 83%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/insert_molecules.cpp [ 84%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -MF CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_floatingpoint.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/readir.cpp [ 84%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o -MF CMakeFiles/simd-test.dir/simd4_math.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_math.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_math.cpp [ 84%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -MF CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o.d -o CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd4_vector_operations.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/solvate.cpp [ 84%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/simd/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/topdirs.cpp [ 84%] Linking CXX executable ../../../../bin/simd-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/simd/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/simd-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/simd-test.dir/base.cpp.o" "CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o" "CMakeFiles/simd-test.dir/scalar.cpp.o" "CMakeFiles/simd-test.dir/scalar_util.cpp.o" "CMakeFiles/simd-test.dir/scalar_math.cpp.o" "CMakeFiles/simd-test.dir/simd.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o" "CMakeFiles/simd-test.dir/simd_integer.cpp.o" "CMakeFiles/simd-test.dir/simd_math.cpp.o" "CMakeFiles/simd-test.dir/simd_memory.cpp.o" "CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/simd4.cpp.o" "CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o" "CMakeFiles/simd-test.dir/simd4_math.cpp.o" "CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o" "CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/simd-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Linking CXX executable ../../../../bin/gmxpreprocess-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmxpreprocess-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/grompp_directives.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o" "CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/gmxpreprocess-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In member function 'compareSimdMathFunction.constprop': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:309:87: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 309 | std::vector testPoints = generateTestPoints(compareSettings.range, s_nPoints); | ^ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp: In function 'generateTestPoints': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/simd/tests/simd_math.cpp:169:19: note: parameter passing for argument of type 'struct pair' when C++17 is enabled changed to match C++14 in GCC 10.1 169 | std::vector SimdMathTest::generateTestPoints(Range inputRange, std::size_t inputPoints) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 84%] Built target simd-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 84%] Built target gmxana-test /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build.make src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/gmxpreprocess/tests/pdb2gmx.cpp [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=0 -DCHARMM=0 -DGMX_DOUBLE=1 -DGROMOS=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 84%] Linking CXX executable ../../../../bin/pdb2gmx2-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx2-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx2-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 84%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/g++ -DAMBER=1 -DCHARMM=1 -DGMX_DOUBLE=1 -DGROMOS=0 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DOPLSAA=0 -DTEST_DATA_PATH=\"src/gromacs/gmxpreprocess/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 84%] Built target pdb2gmx1-test /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/correlationfunctions/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build.make src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 84%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/correlationfunctions/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/correlationfunctions/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/autocorr.cpp [ 85%] Linking CXX executable ../../../../bin/pdb2gmx3-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/gmxpreprocess/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2gmx3-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o" "CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/pdb2gmx3-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 85%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -MF CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o.d -o CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/correlationfunctions/tests/manyautocorrelation.cpp [ 86%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o cd 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src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX executable ../../../../bin/correlations-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/correlationfunctions/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/correlations-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/correlations-test.dir/autocorr.cpp.o" "CMakeFiles/correlations-test.dir/correlationdataset.cpp.o" "CMakeFiles/correlations-test.dir/expfit.cpp.o" "CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o" "CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/correlations-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 86%] Built target correlations-test /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/datatest.cpp [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:49, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228063].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_parallelDataStarted(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:71:5, inlined from 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.228064].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In function 'gmx::test::(anonymous namespace)::setSerialExpectationForParallelDataStarted(gmx::test::MockAnalysisDataModule*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:473:43: note: '' declared here 473 | EXPECT_CALL(*mock, parallelDataStarted(_, _)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_dataStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:73:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237615].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:579:35: note: '' declared here 579 | EXPECT_CALL(*this, dataStarted(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237620].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:583:40: note: '' declared here 583 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237628].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:589:47: note: '' declared here 589 | EXPECT_CALL(*this, pointsAdded(_)) | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237636].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticColumnCheck(gmx::test::AnalysisDataTestInput const&, int, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:593:41: note: '' declared here 593 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238074].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:617:40: note: '' declared here 617 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238109].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:621:43: note: '' declared here 621 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:9: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.238382].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticStorageCheck(gmx::test::AnalysisDataTestInput const&, int, gmx::AbstractAnalysisData*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:623:41: note: '' declared here 623 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameStarted(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:74:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237552].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:551:44: note: '' declared here 551 | EXPECT_CALL(*this, frameStarted(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_pointsAdded(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:75:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:17: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237570].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:557:47: note: '' declared here 557 | EXPECT_CALL(*this, pointsAdded(_)).WillOnce(Invoke(checker)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockAnalysisDataModule::gmock_frameFinished(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.h:76:5, inlined from 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:13: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.237575].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp: In member function 'gmx::test::MockAnalysisDataModule::setupStaticCheck(gmx::test::AnalysisDataTestInput const&, gmx::AbstractAnalysisData*, bool)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/mock_datamodule.cpp:559:45: note: '' declared here 559 | EXPECT_CALL(*this, frameFinished(_)).WillOnce(Invoke(StaticDataFrameHeaderChecker(&frame))); | ^ [ 86%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 86%] Linking CXX static library ../../../../lib/libanalysisdata-test-shared.a cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -P CMakeFiles/analysisdata-test-shared.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test-shared.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../../lib/libanalysisdata-test-shared.a "CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o" "CMakeFiles/analysisdata-test-shared.dir/__/__/__/testutils/unittest_main.cpp.o" /usr/bin/ranlib ../../../../lib/libanalysisdata-test-shared.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 86%] Built target analysisdata-test-shared /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build.make src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/builder.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/builder.cpp.o -MF CMakeFiles/coordinateio-test.dir/builder.cpp.o.d -o CMakeFiles/coordinateio-test.dir/builder.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/builder.cpp [ 86%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/outputadapters.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 87%] Built target pdb2gmx2-test /usr/bin/gmake -f src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/build.make src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests 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-I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o -MF CMakeFiles/coordinateio-test.dir/requirements.cpp.o.d -o CMakeFiles/coordinateio-test.dir/requirements.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/requirements.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 87%] Built target pdb2gmx3-test /usr/bin/gmake -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/energyanalysis/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/energyanalysis/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build.make src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/build 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src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setatoms.cpp [ 87%] Linking CXX executable ../../../../bin/energyanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/energyanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/energyanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o" "CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/energyanalysis-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setbothtime.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280633].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.280634].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_RunsWithSubsetTrajectory_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:126:43: note: '' declared here 126 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -MF CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o.d -o CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/setstarttime.cpp In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.283875].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from '(anonymous namespace)::MockModule::gmock_initAnalysis(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:69:5, inlined from '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.283876].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp: In member function '(anonymous namespace)::TrajectoryAnalysisCommandLineRunnerTest_DetectsIncorrectTrajectorySubset_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/cmdlinerunner.cpp:143:43: note: '' declared here 143 | EXPECT_CALL(*mockModule_, initAnalysis(_, _)); | ^ [ 87%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/convert_trj.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -MF CMakeFiles/coordinateio-test.dir/settimestep.cpp.o.d -o CMakeFiles/coordinateio-test.dir/settimestep.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/settimestep.cpp [ 87%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/distance.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o -MF CMakeFiles/coordinateio-test.dir/testmodule.cpp.o.d -o CMakeFiles/coordinateio-test.dir/testmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/coordinateio/tests/testmodule.cpp [ 87%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/extract_cluster.cpp [ 87%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/coordinateio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 87%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/freevolume.cpp [ 87%] Linking CXX executable ../../../../bin/coordinateio-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/coordinateio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/coordinateio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/coordinateio-test.dir/builder.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o" "CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o" "CMakeFiles/coordinateio-test.dir/requirements.cpp.o" "CMakeFiles/coordinateio-test.dir/setatoms.cpp.o" "CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o" "CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o" "CMakeFiles/coordinateio-test.dir/settimestep.cpp.o" "CMakeFiles/coordinateio-test.dir/testmodule.cpp.o" "CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/coordinateio-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 87%] Built target gmxpreprocess-test /usr/bin/gmake -f src/gromacs/tools/tests/CMakeFiles/tool-test.dir/build.make src/gromacs/tools/tests/CMakeFiles/tool-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests/CMakeFiles/tool-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f 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src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/pairdist.cpp [ 87%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o -MF CMakeFiles/tool-test.dir/report_methods.cpp.o.d -o CMakeFiles/tool-test.dir/report_methods.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/report_methods.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/rdf.cpp [ 88%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o -MF CMakeFiles/tool-test.dir/trjconv.cpp.o.d -o CMakeFiles/tool-test.dir/trjconv.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/trjconv.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/sasa.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/surfacearea.cpp [ 88%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/convert-tpr.cpp.o -MF CMakeFiles/tool-test.dir/convert-tpr.cpp.o.d -o CMakeFiles/tool-test.dir/convert-tpr.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/tools/tests/convert-tpr.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/topologyinformation.cpp [ 88%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/tools/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/tool-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/tools/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/tool-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/tool-test.dir/dump.cpp.o" "CMakeFiles/tool-test.dir/helpwriting.cpp.o" "CMakeFiles/tool-test.dir/report_methods.cpp.o" "CMakeFiles/tool-test.dir/trjconv.cpp.o" "CMakeFiles/tool-test.dir/convert-tpr.cpp.o" "CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/tool-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/trajectory.cpp [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/trajectoryanalysis/tests/unionfind.cpp /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 88%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/trajectoryanalysis/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 88%] Linking CXX executable ../../../../bin/trajectoryanalysis-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/trajectoryanalysis/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryanalysis-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/msd.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o" "CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/trajectoryanalysis-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 88%] Built target energyanalysis-test /usr/bin/gmake -f src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/build.make src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/checkpoint.cpp.o -MF CMakeFiles/fileio-test.dir/checkpoint.cpp.o.d -o CMakeFiles/fileio-test.dir/checkpoint.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/checkpoint.cpp [ 88%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o -MF CMakeFiles/fileio-test.dir/confio.cpp.o.d -o CMakeFiles/fileio-test.dir/confio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/confio.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/filemd5.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/filemd5.cpp.o -MF CMakeFiles/fileio-test.dir/filemd5.cpp.o.d -o CMakeFiles/fileio-test.dir/filemd5.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/filemd5.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcserializer.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem 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src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcserializer.cpp.o -MF CMakeFiles/fileio-test.dir/mrcserializer.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcserializer.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcserializer.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o -MF CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcdensitymap.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -MF CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o.d -o CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/mrcdensitymapheader.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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-fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o -MF CMakeFiles/fileio-test.dir/tngio.cpp.o.d -o CMakeFiles/fileio-test.dir/tngio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/tngio.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o -MF CMakeFiles/fileio-test.dir/xvgio.cpp.o.d -o CMakeFiles/fileio-test.dir/xvgio.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/fileio/tests/xvgio.cpp [ 89%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/fileio/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 89%] Built target coordinateio-test [ 89%] Linking CXX executable ../../../../bin/fileio-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/fileio/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileio-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/fileio-test.dir/checkpoint.cpp.o" "CMakeFiles/fileio-test.dir/confio.cpp.o" "CMakeFiles/fileio-test.dir/filemd5.cpp.o" "CMakeFiles/fileio-test.dir/mrcserializer.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o" "CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o" "CMakeFiles/fileio-test.dir/readinp.cpp.o" "CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o" "CMakeFiles/fileio-test.dir/tngio.cpp.o" "CMakeFiles/fileio-test.dir/xvgio.cpp.o" "CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/fileio-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 89%] Built target fileio-test /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests/CMakeFiles/selection-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build.make src/gromacs/selection/tests/CMakeFiles/selection-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/indexutil.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o -MF CMakeFiles/selection-test.dir/nbsearch.cpp.o.d -o CMakeFiles/selection-test.dir/nbsearch.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/nbsearch.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 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/builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/poscalc.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o -MF CMakeFiles/selection-test.dir/selectioncollection.cpp.o.d -o CMakeFiles/selection-test.dir/selectioncollection.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectioncollection.cpp [ 89%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o -MF CMakeFiles/selection-test.dir/selectionoption.cpp.o.d -o CMakeFiles/selection-test.dir/selectionoption.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/tests/selectionoption.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 89%] Built target trajectoryanalysis-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 89%] Built target tool-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/depend [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o -MF CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/compressed_x_output.cpp gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/densityfittingmodule.cpp [ 89%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/interactiveMD.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o -MF CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o.d -o CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/outputfiles.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -MF CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o.d -o CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/mimic.cpp [ 90%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock 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src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/selection/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 90%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/trajectory_writing.cpp [ 90%] Linking CXX executable ../../../../bin/selection-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/selection/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/selection-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem 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../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build 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/builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/checkpoint.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-output-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-output-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 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/usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -MF CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o.d -o CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/exactcontinuation.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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/usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp: In function '_gmx_selvalue_reserve': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/selection/selvalue.cpp:101:47: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 101 | val->u.p = new gmx_ana_pos_t[n]; | ^ /usr/include/c++/13/new:128:26: note: in a call to allocation function 'operator new []' declared here 128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 91%] Built target selection-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -MF CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o.d -o CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multiple_time_stepping.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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-ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -MF CMakeFiles/mdrun-test.dir/swapcoords.cpp.o.d -o CMakeFiles/mdrun-test.dir/swapcoords.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/swapcoords.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ 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-DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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-fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 91%] Linking CXX executable ../../../../bin/mdrun-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o" "CMakeFiles/mdrun-test.dir/swapcoords.cpp.o" "CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o" "CMakeFiles/mdrun-test.dir/freezegroups.cpp.o" "CMakeFiles/mdrun-test.dir/constantacceleration.cpp.o" "CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 91%] Built target mdrun-modules-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build 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src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o -MF CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o.d -o CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/ewaldsurfaceterm.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 91%] Built target mdrun-output-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 91%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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CXX executable ../../../../bin/mdrun-single-rank-algorithms-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-single-rank-algorithms-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-single-rank-algorithms-test.dir/ewaldsurfaceterm.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/orires.cpp.o" "CMakeFiles/mdrun-single-rank-algorithms-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-single-rank-algorithms-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/normalmodes.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/rerun.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simple_mdrun.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 92%] Built target mdrun-io-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -MF CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o.d -o CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/tpitest.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-non-integrator-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-non-integrator-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o" "CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-non-integrator-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-tpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-tpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o" "CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-tpi-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 92%] Built target mdrun-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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-fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -MF CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/minimize.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include 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CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 92%] Linking CXX executable ../../../../bin/mdrun-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed 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-I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem 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../../../../bin/mdrun-multisim-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-test.dir/multisim.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 92%] Built target mdrun-tpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 92%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-replex-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/replicaexchange.cpp.o" "CMakeFiles/mdrun-multisim-replex-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 93%] Built target mdrun-non-integrator-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/multisimtest.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem 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CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/replicaexchange_equivalence.cpp [ 93%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 93%] Linking CXX executable ../../../../bin/mdrun-multisim-replex-equivalence-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/multisimtest.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/replicaexchange_equivalence.cpp.o" "CMakeFiles/mdrun-multisim-replex-equivalence-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-multisim-replex-equivalence-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 93%] Built target mdrun-mpi-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o" "CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-pme-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Built target mdrun-multisim-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_basic.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-basic-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-basic-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/periodicactions_basic.cpp.o" "CMakeFiles/mdrun-mpi-coordination-basic-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-basic-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Built target mdrun-multisim-replex-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Built target mdrun-multisim-replex-equivalence-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o cd 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/periodicactions_coupling.cpp [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o cd 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src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-coupling-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/periodicactions_coupling.cpp.o" "CMakeFiles/mdrun-mpi-coordination-coupling-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-coupling-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Built target mdrun-mpi-pme-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o -c 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-I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 94%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-constraints-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/periodicactions_constraints.cpp.o" "CMakeFiles/mdrun-mpi-coordination-constraints-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-mpi-coordination-constraints-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 94%] Built target mdrun-mpi-coordination-coupling-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/build 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o -MF CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o.d -o CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/freeenergy.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-fep-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-fep-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-fep-test.dir/freeenergy.cpp.o" "CMakeFiles/mdrun-fep-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-fep-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 95%] Built target mdrun-mpi-coordination-basic-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 95%] Built target mdrun-mpi-coordination-constraints-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/pull.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -MF CMakeFiles/mdrun-pull-test.dir/pull.cpp.o.d -o CMakeFiles/mdrun-pull-test.dir/pull.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/pull.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-pull-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-pull-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-pull-test.dir/pull.cpp.o" "CMakeFiles/mdrun-pull-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-pull-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 95%] Built target mdrun-fep-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o -MF CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o.d -o CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/simulator.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" 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/builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 95%] Linking CXX executable ../../../../bin/mdrun-simulator-comparison-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-simulator-comparison-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o" "CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-simulator-comparison-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 95%] Built target mdrun-pull-test /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build.make src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/programs/mdrun/tests/virtualsites.cpp [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/programs/mdrun/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/src/gromacs/utility/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include 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-fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/programs/mdrun/tests/CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 96%] Linking CXX executable ../../../../bin/mdrun-vsites-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/programs/mdrun/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrun-vsites-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags "CMakeFiles/mdrun-vsites-test.dir/virtualsites.cpp.o" "CMakeFiles/mdrun-vsites-test.dir/__/__/__/testutils/unittest_main.cpp.o" ../../CMakeFiles/mdrun_objlib.dir/mdrun/mdrun.cpp.o ../../CMakeFiles/mdrun_objlib.dir/mdrun/nonbonded_bench.cpp.o -o ../../../../bin/mdrun-vsites-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrun_test_infrastructure.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 96%] Built target mdrun-simulator-comparison-test /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build.make src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 96%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255580].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.255581].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:138:34: note: '' declared here 138 | EXPECT_CALL(mod1, initOptions(_, _)).WillOnce(Invoke(&initOptionsBasic)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256649].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_initOptions(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:107:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256650].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:139:34: note: '' declared here 139 | EXPECT_CALL(mod2, initOptions(_, _)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256653].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:140:34: note: '' declared here 140 | EXPECT_CALL(topic1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256656].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:141:32: note: '' declared here 141 | EXPECT_CALL(sub1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256659].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:142:32: note: '' declared here 142 | EXPECT_CALL(sub2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256662].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:143:32: note: '' declared here 143 | EXPECT_CALL(sub3, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.256665].buffer_' may be used uninitialized [-Wmaybe-uninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_ExportsHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:144:34: note: '' declared here 144 | EXPECT_CALL(topic2, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockHelpTopic::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/onlinehelp/tests/mock_helptopic.h:69:5, inlined from '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.254599].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp: In member function '(anonymous namespace)::CommandLineHelpModuleTest_PrintsHelpOnTopic_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpmodule.cpp:92:33: note: '' declared here 92 | EXPECT_CALL(topic, writeHelp(_)); | ^ [ 96%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinehelpwriter.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:45: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243854].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashH_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:116:32: note: '' declared here 116 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.243700].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpAfterQuiet_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:101:32: note: '' declared here 101 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.242871].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelp_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:86:32: note: '' declared here 86 | EXPECT_CALL(mod1, writeHelp(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240024].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:71:27: note: '' declared here 71 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240768].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.240769].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:72:26: note: '' declared here 72 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244202].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:148:27: note: '' declared here 148 | EXPECT_CALL(mod1, init(_)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244205].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_run(testing::Matcher const&, testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:80:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244206].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_HandlesConflictingBinaryAndModuleNames_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:149:26: note: '' declared here 149 | EXPECT_CALL(mod1, run(_, _)).With(Args<1, 0>(ElementsAreArray(args.argv() + 1, args.argc() - 1))); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.244046].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp: In member function '(anonymous namespace)::CommandLineModuleManagerTest_RunsModuleHelpWithDashHWithSingleModule_Test::TestBody()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanager.cpp:131:31: note: '' declared here 131 | EXPECT_CALL(mod, writeHelp(_)); | ^ [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/internal/gtest-death-test-internal.h:38, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-death-test.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest.h:62, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/internal/gmock-internal-utils.h:45, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-actions.h:143, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:57, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:47, from /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:43: In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockOptionsModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:106:5, inlined from 'gmx::test::MockOptionsModule::MockOptionsModule()' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249346].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock-function-mocker.h:40, from /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include/gmock/gmock.h:59: /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockOptionsModule::MockOptionsModule()': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:113:24: note: '' declared here 113 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_init(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:79:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249218].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:89:24: note: '' declared here 89 | ON_CALL(*this, init(_)).WillByDefault(Invoke(&disableNice)); | ^ In member function 'testing::internal::MatcherBase::MatcherBase(testing::internal::MatcherBase const&)', inlined from 'testing::Matcher::Matcher(testing::Matcher const&)' at /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:483:7, inlined from 'gmx::test::MockModule::gmock_writeHelp(testing::Matcher const&) const' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.h:81:5, inlined from 'gmx::test::MockModule::MockModule(char const*, char const*)' at /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:5: /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include/gtest/gtest-matchers.h:302:33: warning: 'MEM[(const struct MatcherBase &)&D.249224].buffer_' is used uninitialized [-Wuninitialized] 302 | : vtable_(other.vtable_), buffer_(other.buffer_) { | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp: In member function 'gmx::test::MockModule::MockModule(char const*, char const*)': /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlinemodulemanagertest.cpp:90:29: note: '' declared here 90 | ON_CALL(*this, writeHelp(_)).WillByDefault(Invoke(this, &MockModule::checkHelpContext)); | ^ [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineparser.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -MF CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o.d -o CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/cmdlineprogramcontext.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o -MF CMakeFiles/commandline-test.dir/filenm.cpp.o.d -o CMakeFiles/commandline-test.dir/filenm.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/commandline/tests/filenm.cpp [ 97%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/commandline/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem 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-mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 97%] Linking CXX executable ../../../../bin/commandline-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/commandline/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/commandline-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o" "CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o" "CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o" "CMakeFiles/commandline-test.dir/filenm.cpp.o" "CMakeFiles/commandline-test.dir/pargs.cpp.o" "CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/commandline-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libonlinehelp-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 97%] Built target commandline-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem 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src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -MF CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity.cpp [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/mdrunutility-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o" "CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/mdrunutility-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Built target mdrunutility-test /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build.make src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o cd 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src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/mdrunutility/tests/threadaffinity_mpi.cpp [ 98%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/mdrunutility/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests/Testing/Temporary\" -DTEST_USES_MPI=true -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include 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-Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build.make src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer 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-I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -MF CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o.d -o CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/analysisdata.cpp [ 98%] Linking CXX executable ../../../../bin/mdrunutility-mpi-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/mdrunutility/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/mdrunutility-mpi-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security 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../../../../lib/libmdrunutility-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o -MF CMakeFiles/analysisdata-test.dir/average.cpp.o.d -o CMakeFiles/analysisdata-test.dir/average.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/average.cpp gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Built target mdrun-vsites-test [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o cd 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-I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -MF CMakeFiles/analysisdata-test.dir/lifetime.cpp.o.d -o CMakeFiles/analysisdata-test.dir/lifetime.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/gromacs/analysisdata/tests/lifetime.cpp [ 98%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/g++ -DGMX_DOUBLE=1 -DGTEST_LANG_CXX11 -DHAVE_CONFIG_H -DTEST_DATA_PATH=\"src/gromacs/analysisdata/tests\" -DTEST_TEMP_PATH=\"/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests/Testing/Temporary\" -DTMPI_USE_VISIBILITY -I/builddir/build/BUILD/gromacs-2022.3/src/testutils/include -I/builddir/build/BUILD/gromacs-2022.3/src/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/include -I/builddir/build/BUILD/gromacs-2022.3/src -I/builddir/build/BUILD/gromacs-2022.3/api/legacy/include -I/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/api/legacy/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/thread_mpi/include -isystem /usr/include/openmpi-aarch64 -isystem /builddir/build/BUILD/gromacs-2022.3/src/external -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/muparser -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googlemock -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest/include -isystem /builddir/build/BUILD/gromacs-2022.3/src/external/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -std=c++17 -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -MD -MT src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -MF CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o.d -o CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o -c /builddir/build/BUILD/gromacs-2022.3/src/testutils/unittest_main.cpp [ 98%] Linking CXX executable ../../../../bin/analysisdata-test cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/src/gromacs/analysisdata/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysisdata-test.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DNDEBUG -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o" "CMakeFiles/analysisdata-test.dir/arraydata.cpp.o" "CMakeFiles/analysisdata-test.dir/average.cpp.o" "CMakeFiles/analysisdata-test.dir/histogram.cpp.o" "CMakeFiles/analysisdata-test.dir/lifetime.cpp.o" "CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o" -o ../../../../bin/analysisdata-test -Wl,-rpath,/usr/lib64/openmpi/lib ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a ../../../../lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libanalysisdata-test-shared.a ../../../../lib/libtestutils.a ../../../../lib/libgromacs_openmpi_d.a /usr/lib64/libtng_io.so.1.8.2 -lrt /usr/lib64/libfftw3.so -lflexiblas -lm -ltng_io /usr/lib/gcc/aarch64-redhat-linux/13/libgomp.so /usr/lib64/libpthread.a /usr/lib64/liblmfit.so /usr/lib64/libmuparser.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so ../../../../lib/libgmock.a ../../../../lib/libgtest.a gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Built target mdrunutility-mpi-test gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Built target analysisdata-test /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles/tests.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/tests.dir/build.make CMakeFiles/tests.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/tests.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [ 98%] Built target tests /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles/run-ctest-nophys.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/run-ctest-nophys.dir/build.make CMakeFiles/run-ctest-nophys.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Running all tests except physical validation /usr/bin/ctest --output-on-failure -E physicalvalidationtests Test project /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build Start 1: TestUtilsUnitTests 1/73 Test #1: TestUtilsUnitTests ............................. Passed 1.63 sec Start 2: TestUtilsMpiUnitTests 2/73 Test #2: TestUtilsMpiUnitTests .......................... Passed 1.24 sec Start 3: UtilityUnitTests 3/73 Test #3: UtilityUnitTests ............................... Passed 1.32 sec Start 4: UtilityMpiUnitTests 4/73 Test #4: UtilityMpiUnitTests ............................ Passed 1.21 sec Start 5: GmxlibTests 5/73 Test #5: GmxlibTests .................................... Passed 1.29 sec Start 6: MdlibUnitTest 6/73 Test #6: MdlibUnitTest .................................. Passed 1.30 sec Start 7: AwhTest 7/73 Test #7: AwhTest ........................................ Passed 1.24 sec Start 8: DensityFittingAppliedForcesUnitTest 8/73 Test #8: DensityFittingAppliedForcesUnitTest ............ Passed 1.19 sec Start 9: QMMMAppliedForcesUnitTest 9/73 Test #9: QMMMAppliedForcesUnitTest ...................... Passed 1.16 sec Start 10: AppliedForcesUnitTest 10/73 Test #10: AppliedForcesUnitTest .......................... Passed 1.19 sec Start 11: ListedForcesTest 11/73 Test #11: ListedForcesTest ............................... Passed 1.25 sec Start 12: NbnxmTests 12/73 Test #12: NbnxmTests ..................................... Passed 1.18 sec Start 13: CommandLineUnitTests 13/73 Test #13: CommandLineUnitTests ........................... Passed 1.12 sec Start 14: DomDecTests 14/73 Test #14: DomDecTests .................................... Passed 1.17 sec Start 15: DomDecMpiTests 15/73 Test #15: DomDecMpiTests ................................. Passed 1.35 sec Start 16: EwaldUnitTests 16/73 Test #16: EwaldUnitTests ................................. Passed 1.43 sec Start 17: FFTUnitTests 17/73 Test #17: FFTUnitTests ................................... Passed 1.24 sec Start 18: GpuUtilsUnitTests 18/73 Test #18: GpuUtilsUnitTests .............................. Passed 1.21 sec Start 19: HardwareUnitTests 19/73 Test #19: HardwareUnitTests .............................. Passed 1.27 sec Start 20: MathUnitTests 20/73 Test #20: MathUnitTests .................................. Passed 1.31 sec Start 21: MdrunUtilityUnitTests 21/73 Test #21: MdrunUtilityUnitTests .......................... Passed 1.12 sec Start 22: MdrunUtilityMpiUnitTests 22/73 Test #22: MdrunUtilityMpiUnitTests ....................... Passed 1.16 sec Start 23: MDSpanTests 23/73 Test #23: MDSpanTests .................................... Passed 1.19 sec Start 24: MdtypesUnitTest 24/73 Test #24: MdtypesUnitTest ................................ Passed 1.22 sec Start 25: OnlineHelpUnitTests 25/73 Test #25: OnlineHelpUnitTests ............................ Passed 1.20 sec Start 26: OptionsUnitTests 26/73 Test #26: OptionsUnitTests ............................... Passed 1.30 sec Start 27: PbcutilUnitTest 27/73 Test #27: PbcutilUnitTest ................................ Passed 1.22 sec Start 28: RandomUnitTests 28/73 Test #28: RandomUnitTests ................................ Passed 1.20 sec Start 29: RestraintTests 29/73 Test #29: RestraintTests ................................. Passed 1.18 sec Start 30: TableUnitTests 30/73 Test #30: TableUnitTests ................................. Passed 1.34 sec Start 31: TaskAssignmentUnitTests 31/73 Test #31: TaskAssignmentUnitTests ........................ Passed 1.18 sec Start 32: GmxTimingTests 32/73 Test #32: GmxTimingTests ................................. Passed 1.16 sec Start 33: TopologyTest 33/73 Test #33: TopologyTest ................................... Passed 1.24 sec Start 34: PullTest 34/73 Test #34: PullTest ....................................... Passed 1.17 sec Start 35: SimdUnitTests 35/73 Test #35: SimdUnitTests .................................. Passed 1.29 sec Start 36: CompatibilityHelpersTests 36/73 Test #36: CompatibilityHelpersTests ...................... Passed 1.19 sec Start 37: GmxAnaTest 37/73 Test #37: GmxAnaTest ..................................... Passed 1.94 sec Start 38: GmxPreprocessTests 38/73 Test #38: GmxPreprocessTests ............................. Passed 2.13 sec Start 39: Pdb2gmx1Test 39/73 Test #39: Pdb2gmx1Test ................................... Passed 2.37 sec Start 40: Pdb2gmx2Test 40/73 Test #40: Pdb2gmx2Test ................................... Passed 2.35 sec Start 41: Pdb2gmx3Test 41/73 Test #41: Pdb2gmx3Test ................................... Passed 4.21 sec Start 42: CorrelationsTest 42/73 Test #42: CorrelationsTest ............................... Passed 1.27 sec Start 43: AnalysisDataUnitTests 43/73 Test #43: AnalysisDataUnitTests .......................... Passed 1.13 sec Start 44: CoordinateIOTests 44/73 Test #44: CoordinateIOTests .............................. Passed 1.25 sec Start 45: TrajectoryAnalysisUnitTests 45/73 Test #45: TrajectoryAnalysisUnitTests .................... Passed 2.04 sec Start 46: EnergyAnalysisUnitTests 46/73 Test #46: EnergyAnalysisUnitTests ........................ Passed 1.29 sec Start 47: ToolUnitTests 47/73 Test #47: ToolUnitTests .................................. Passed 2.72 sec Start 48: FileIOTests 48/73 Test #48: FileIOTests .................................... Passed 1.26 sec Start 49: SelectionUnitTests 49/73 Test #49: SelectionUnitTests ............................. Passed 1.23 sec Start 50: MdrunOutputTests 50/73 Test #50: MdrunOutputTests ............................... Passed 1.25 sec Start 51: MdrunModulesTests 51/73 Test #51: MdrunModulesTests .............................. Passed 1.28 sec Start 52: MdrunIOTests 52/73 Test #52: MdrunIOTests ................................... Passed 1.72 sec Start 53: MdrunTestsOneRank 53/73 Test #53: MdrunTestsOneRank .............................. Passed 2.07 sec Start 54: MdrunTestsTwoRanks 54/73 Test #54: MdrunTestsTwoRanks ............................. Passed 1.93 sec Start 55: MdrunSingleRankAlgorithmsTests 55/73 Test #55: MdrunSingleRankAlgorithmsTests ................. Passed 1.29 sec Start 56: MdrunNonIntegratorTests 56/73 Test #56: MdrunNonIntegratorTests ........................ Passed 4.60 sec Start 57: MdrunTpiTests 57/73 Test #57: MdrunTpiTests .................................. Passed 1.67 sec Start 58: MdrunMpiTests 58/73 Test #58: MdrunMpiTests .................................. Passed 1.95 sec Start 59: MdrunMultiSimTests 59/73 Test #59: MdrunMultiSimTests ............................. Passed 1.23 sec Start 60: MdrunMultiSimReplexTests 60/73 Test #60: MdrunMultiSimReplexTests ....................... Passed 1.21 sec Start 61: MdrunMultiSimReplexEquivalenceTests 61/73 Test #61: MdrunMultiSimReplexEquivalenceTests ............ Passed 3.79 sec Start 62: MdrunMpi1RankPmeTests 62/73 Test #62: MdrunMpi1RankPmeTests .......................... Passed 1.24 sec Start 63: MdrunMpi2RankPmeTests 63/73 Test #63: MdrunMpi2RankPmeTests .......................... Passed 1.30 sec Start 64: MdrunMpiCoordinationBasicTestsOneRank 64/73 Test #64: MdrunMpiCoordinationBasicTestsOneRank .......... Passed 1.14 sec Start 65: MdrunMpiCoordinationBasicTestsTwoRanks 65/73 Test #65: MdrunMpiCoordinationBasicTestsTwoRanks ......... Passed 1.15 sec Start 66: MdrunMpiCoordinationCouplingTestsOneRank 66/73 Test #66: MdrunMpiCoordinationCouplingTestsOneRank ....... Passed 1.55 sec Start 67: MdrunMpiCoordinationCouplingTestsTwoRanks 67/73 Test #67: MdrunMpiCoordinationCouplingTestsTwoRanks ...... Passed 1.64 sec Start 68: MdrunMpiCoordinationConstraintsTestsOneRank 68/73 Test #68: MdrunMpiCoordinationConstraintsTestsOneRank .... Passed 15.69 sec Start 69: MdrunMpiCoordinationConstraintsTestsTwoRanks 69/73 Test #69: MdrunMpiCoordinationConstraintsTestsTwoRanks ... Passed 15.72 sec Start 70: MdrunFEPTests 70/73 Test #70: MdrunFEPTests .................................. Passed 1.61 sec Start 71: MdrunPullTests 71/73 Test #71: MdrunPullTests ................................. Passed 2.19 sec Start 72: MdrunSimulatorComparison 72/73 Test #72: MdrunSimulatorComparison ....................... Passed 8.76 sec Start 73: MdrunVirtualSiteTests 73/73 Test #73: MdrunVirtualSiteTests .......................... Passed 1.23 sec 100% tests passed, 0 tests failed out of 73 Label Time Summary: GTest = 147.04 sec*proc (73 tests) IntegrationTest = 42.24 sec*proc (19 tests) MpiTest = 57.80 sec*proc (19 tests) QuickGpuTest = 20.83 sec*proc (15 tests) SlowTest = 53.97 sec*proc (13 tests) UnitTest = 50.83 sec*proc (41 tests) Total Test time (real) = 147.18 sec gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Built target run-ctest-nophys /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/tests /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/tests/CMakeFiles/missing-tests-notice.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f tests/CMakeFiles/missing-tests-notice.dir/build.make tests/CMakeFiles/missing-tests-notice.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Some tests not available cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/tests && /usr/bin/cmake -E echo "NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON." NOTE: Regression tests have not been run. If you want to run them from the build system, get the correct version of the regression tests package and set REGRESSIONTEST_PATH in CMake to point to it, or set REGRESSIONTEST_DOWNLOAD=ON. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Built target missing-tests-notice /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/depend gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' cd /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3 /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles/check.dir/DependInfo.cmake "--color=" gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/check.dir/build.make CMakeFiles/check.dir/build gmake[3]: Entering directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' gmake[3]: Nothing to be done for 'CMakeFiles/check.dir/build'. gmake[3]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' [100%] Built target check gmake[2]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build/CMakeFiles 0 gmake[1]: Leaving directory '/builddir/build/BUILD/gromacs-2022.3/openmpi_d/redhat-linux-build' + [[ openmpi = openmpi ]] + unset OMPI_MCA_rmaps_base_oversubscribe ~/build/BUILD/gromacs-2022.3 + popd + test -n openmpi + module unload mpi/openmpi-aarch64 + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: gromacs-2022.3-4.fc39.aarch64 Provides: gromacs = 2022.3-4.fc39 gromacs(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/perl ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libX11.so.6()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgromacs.so.7()(64bit) libgromacs_d.so.7()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) rtld(GNU_HASH) Obsoletes: gromacs-csh < 2016.1-2 gromacs-ngmx < 5.0.4-1 gromacs-zsh < 2016.1-2 Recommends: gromacs-opencl = 2022.3-4.fc39 Processing files: gromacs-common-2022.3-4.fc39.noarch Provides: gromacs-bash = 2022.3-4.fc39 gromacs-common = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Obsoletes: gromacs-bash < 5.0.4-1 Processing files: gromacs-opencl-2022.3-4.fc39.aarch64 Provides: gromacs-opencl = 2022.3-4.fc39 gromacs-opencl(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Suggests: beignet mesa-libOpenCL pocl Processing files: gromacs-doc-2022.3-4.fc39.noarch Provides: gromacs-doc = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Obsoletes: gromacs-common < 5.0.5-2 Processing files: gromacs-devel-2022.3-4.fc39.aarch64 Provides: cmake(gmxapi) = 0.3.1 cmake(gromacs) = 2022.3 cmake(gromacs_d) = 2022.3 gromacs-devel = 2022.3-4.fc39 gromacs-devel(aarch-64) = 2022.3-4.fc39 pkgconfig(libgromacs) = 2022.3-Fedora39 pkgconfig(libgromacs_d) = 2022.3-Fedora39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config cmake-filesystem pkgconfig(fftw3) pkgconfig(fftw3f) Obsoletes: gromacs-mpich-devel < 2016-0.1.20160318gitbec9c87 gromacs-openmpi-devel < 2016-0.1.20160318gitbec9c87 Processing files: gromacs-libs-2022.3-4.fc39.aarch64 Provides: gromacs-libs = 2022.3-4.fc39 gromacs-libs(aarch-64) = 2022.3-4.fc39 libgmxapi.so.0()(64bit) libgmxapi_d.so.0()(64bit) libgromacs.so.7()(64bit) libgromacs_d.so.7()(64bit) libnblib_gmx.so.0()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libfftw3.so.3()(64bit) libfftw3f.so.3()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgromacs.so.7()(64bit) libgromacs_d.so.7()(64bit) liblmfit.so.8()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libmuparser.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libtng_io.so.1()(64bit) rtld(GNU_HASH) Processing files: gromacs-openmpi-2022.3-4.fc39.aarch64 Provides: gromacs-openmpi = 2022.3-4.fc39 gromacs-openmpi(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libfftw3.so.3()(64bit) libfftw3f.so.3()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) liblmfit.so.8()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libmpi.so.40()(64bit)(openmpi-aarch64) libmuparser.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libtng_io.so.1()(64bit) rtld(GNU_HASH) Obsoletes: gromacs-openmpi-libs < 2016-0.1.20160318gitbec9c87 Recommends: gromacs-opencl = 2022.3-4.fc39 Processing files: gromacs-mpich-2022.3-4.fc39.aarch64 Provides: gromacs-mpich = 2022.3-4.fc39 gromacs-mpich(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libfftw3.so.3()(64bit) libfftw3f.so.3()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) liblmfit.so.8()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libmpi.so.12()(64bit)(mpich-aarch64) libmuparser.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libtng_io.so.1()(64bit) rtld(GNU_HASH) Obsoletes: gromacs-mpich-libs < 2016-0.1.20160318gitbec9c87 Recommends: gromacs-opencl = 2022.3-4.fc39 Processing files: gromacs-debugsource-2022.3-4.fc39.aarch64 Provides: gromacs-debugsource = 2022.3-4.fc39 gromacs-debugsource(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: gromacs-debuginfo-2022.3-4.fc39.aarch64 Provides: debuginfo(build-id) = a03ef89e434f8fdb01ee248175c9053fdbbc1c2e debuginfo(build-id) = ea9c9ed3814e1d32598b7dcc1cc67f03e475c0e9 gromacs-debuginfo = 2022.3-4.fc39 gromacs-debuginfo(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: gromacs-debugsource(aarch-64) = 2022.3-4.fc39 Processing files: gromacs-libs-debuginfo-2022.3-4.fc39.aarch64 Provides: debuginfo(build-id) = 053d35ddab52554b001690b10abbaa960a52847f debuginfo(build-id) = 181ac50fcb9ea55e452daae78490327668ed365a debuginfo(build-id) = 53ffe9ec404e037a60442b7af75d99c093c85ead debuginfo(build-id) = c69215322c833351bf5be2501e813950bb69d0ae debuginfo(build-id) = e4747ccd1e1fc9fdffed4be347d6f54bcf606d4f gromacs-libs-debuginfo = 2022.3-4.fc39 gromacs-libs-debuginfo(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: gromacs-debugsource(aarch-64) = 2022.3-4.fc39 Processing files: gromacs-openmpi-debuginfo-2022.3-4.fc39.aarch64 Provides: debuginfo(build-id) = 9c62d8708f05ae51e00115e5f5158dc0b7bf2ace debuginfo(build-id) = ac9a7dc645abe46af48420ca45328fdb4a1cd768 gromacs-openmpi-debuginfo = 2022.3-4.fc39 gromacs-openmpi-debuginfo(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: gromacs-debugsource(aarch-64) = 2022.3-4.fc39 Processing files: gromacs-mpich-debuginfo-2022.3-4.fc39.aarch64 Provides: debuginfo(build-id) = d43f718606d5470cb4b272925de19702784ede5c debuginfo(build-id) = da6b0f1413b59977b649aa2bbebb6ce96e03729c gromacs-mpich-debuginfo = 2022.3-4.fc39 gromacs-mpich-debuginfo(aarch-64) = 2022.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: gromacs-debugsource(aarch-64) = 2022.3-4.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 Wrote: /builddir/build/RPMS/gromacs-libs-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-mpich-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-openmpi-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-debugsource-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-doc-2022.3-4.fc39.noarch.rpm Wrote: /builddir/build/RPMS/gromacs-common-2022.3-4.fc39.noarch.rpm Wrote: /builddir/build/RPMS/gromacs-debuginfo-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-devel-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-opencl-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-mpich-debuginfo-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-openmpi-debuginfo-2022.3-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/gromacs-libs-debuginfo-2022.3-4.fc39.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.ihtkSr + umask 022 + cd /builddir/build/BUILD + cd gromacs-2022.3 + /usr/bin/rm -rf /builddir/build/BUILDROOT/gromacs-2022.3-4.fc39.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.3mCr7e + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/gromacs-2022.3-SPECPARTS + rm -rf gromacs-2022.3 gromacs-2022.3.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0